RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 PRPF40AO75400 957 aaKnown RBP6.65□□□□□ -1.34
LEMD3-204ENST00000542032 ADMP35318 185 aa6.65□□□□□ -1.34
LEMD3-204ENST00000542032 ASPAP45381 313 aa6.65□□□□□ -1.34
LEMD3-204ENST00000542032 NFKBIBQ15653 356 aa6.65□□□□□ -1.34
LEMD3-204ENST00000542032 ZAR1Q86SH2 424 aa6.65□□□□□ -1.34
LEMD3-204ENST00000542032 NPAS4Q8IUM7 802 aa6.65□□□□□ -1.34
LEMD3-204ENST00000542032 FANCD2OSQ96PS1 177 aa6.65□□□□□ -1.34
LEMD3-204ENST00000542032 ZC3H12CQ9C0D7 883 aaKnown RBP6.65□□□□□ -1.34
LEMD3-204ENST00000542032 FAM8A1Q9UBU6 413 aa6.65□□□□□ -1.34
LEMD3-204ENST00000542032 AP4E1Q9UPM8 1137 aa6.65□□□□□ -1.34
LEMD3-204ENST00000542032 WDR64B1ANS9 1081 aa6.64□□□□□ -1.35
LEMD3-204ENST00000542032 PAGE1O75459 146 aa6.64□□□□□ -1.35
LEMD3-204ENST00000542032 NFICP08651 508 aa6.64□□□□□ -1.35
LEMD3-204ENST00000542032 GNA15P30679 374 aa6.64□□□□□ -1.35
LEMD3-204ENST00000542032 ID3Q02535 119 aa6.64□□□□□ -1.35
LEMD3-204ENST00000542032 MAP7Q14244 749 aa6.64□□□□□ -1.35
LEMD3-204ENST00000542032 TPTE2Q6XPS3 522 aa6.64□□□□□ -1.35
LEMD3-204ENST00000542032 EMILIN2Q9BXX0 1053 aa6.64□□□□□ -1.35
LEMD3-204ENST00000542032 CEP44Q9C0F1 390 aa6.64□□□□□ -1.35
LEMD3-204ENST00000542032 DISC1Q9NRI5 854 aa6.64□□□□□ -1.35
LEMD3-204ENST00000542032 C1GALT1Q9NS00 363 aa6.64□□□□□ -1.35
LEMD3-204ENST00000542032 USP17L7P0C7H9 530 aa6.63□□□□□ -1.35
LEMD3-204ENST00000542032 SLFN14P0C7P3 912 aa6.63□□□□□ -1.35
LEMD3-204ENST00000542032 ZC3H12AQ5D1E8 599 aaKnown RBP6.63□□□□□ -1.35
LEMD3-204ENST00000542032 PIM2Q9P1W9 311 aa6.63□□□□□ -1.35
LEMD3-204ENST00000542032 B8ZZF3 427 aa6.62□□□□□ -1.35
LEMD3-204ENST00000542032 DYNC1LI2O43237 492 aaPredicted RBP6.62□□□□□ -1.35
LEMD3-204ENST00000542032 RAB6AP20340 208 aa6.62□□□□□ -1.35
LEMD3-204ENST00000542032 BUD31P41223 144 aaPredicted RBP6.62□□□□□ -1.35
LEMD3-204ENST00000542032 EAPPQ56P03 285 aaPredicted RBP6.62□□□□□ -1.35
LEMD3-204ENST00000542032 RASIP1Q5U651 963 aa6.62□□□□□ -1.35
LEMD3-204ENST00000542032 SCARA3Q6AZY7 606 aa6.62□□□□□ -1.35
LEMD3-204ENST00000542032 MPRIPQ6WCQ1 1025 aa6.62□□□□□ -1.35
LEMD3-204ENST00000542032 GPBAR1Q8TDU6 330 aa6.62□□□□□ -1.35
LEMD3-204ENST00000542032 KCNB2Q92953 911 aa6.62□□□□□ -1.35
LEMD3-204ENST00000542032 ATXN3LQ9H3M9 355 aa6.62□□□□□ -1.35
LEMD3-204ENST00000542032 RNF19AQ9NV58 838 aa6.62□□□□□ -1.35
LEMD3-204ENST00000542032 AK5Q9Y6K8 562 aa6.62□□□□□ -1.35
LEMD3-204ENST00000542032 TRIM37O94972 964 aa6.61□□□□□ -1.35
LEMD3-204ENST00000542032 FOSL1P15407 271 aa6.61□□□□□ -1.35
LEMD3-204ENST00000542032 HOXA10P31260 410 aaPredicted RBP6.61□□□□□ -1.35
LEMD3-204ENST00000542032 ERVK-24P63145 666 aa6.61□□□□□ -1.35
LEMD3-204ENST00000542032 FGD1P98174 961 aa6.61□□□□□ -1.35
LEMD3-204ENST00000542032 HNRNPUQ00839 825 aaKnown RBP eCLIP6.61□□□□□ -1.35
LEMD3-204ENST00000542032 RING1Q06587 406 aa6.61□□□□□ -1.35
LEMD3-204ENST00000542032 MSMPQ1L6U9 139 aa6.61□□□□□ -1.35
LEMD3-204ENST00000542032 MAP1SQ66K74 1059 aaPredicted RBP6.61□□□□□ -1.35
LEMD3-204ENST00000542032 LILRA6Q6PI73 481 aa6.61□□□□□ -1.35
LEMD3-204ENST00000542032 FBXL6Q8N531 539 aa6.61□□□□□ -1.35
LEMD3-204ENST00000542032 GIMAP7Q8NHV1 300 aa6.61□□□□□ -1.35
LEMD3-204ENST00000542032 GRIN3AQ8TCU5 1115 aa6.61□□□□□ -1.35
LEMD3-204ENST00000542032 TBC1D32Q96NH3 1257 aa6.61□□□□□ -1.35
LEMD3-204ENST00000542032 METTL22Q9BUU2 404 aaPredicted RBP6.61□□□□□ -1.35
LEMD3-204ENST00000542032 FBXO24O75426 580 aa6.6□□□□□ -1.35
LEMD3-204ENST00000542032 CELA3AP09093 270 aa6.6□□□□□ -1.35
LEMD3-204ENST00000542032 EIF4BP23588 611 aaKnown RBP6.6□□□□□ -1.35
LEMD3-204ENST00000542032 SV2BQ7L1I2 683 aa6.6□□□□□ -1.35
LEMD3-204ENST00000542032 FBXO33Q7Z6M2 555 aa6.6□□□□□ -1.35
LEMD3-204ENST00000542032 DUSP9Q99956 384 aaKnown RBP6.6□□□□□ -1.35
LEMD3-204ENST00000542032 OSBPL1AQ9BXW6 950 aa6.6□□□□□ -1.35
LEMD3-204ENST00000542032 ATG3Q9NT62 314 aa6.6□□□□□ -1.35
LEMD3-204ENST00000542032 SAMM50Q9Y512 469 aa6.6□□□□□ -1.35
LEMD3-204ENST00000542032 FAM170BA6NMN3 283 aa6.59□□□□□ -1.35
LEMD3-204ENST00000542032 NEFMP07197 916 aa6.59□□□□□ -1.35
LEMD3-204ENST00000542032 NTF4P34130 210 aa6.59□□□□□ -1.35
LEMD3-204ENST00000542032 TTLL4Q14679 1199 aa6.59□□□□□ -1.35
LEMD3-204ENST00000542032 CYP8B1Q9UNU6 501 aa6.59□□□□□ -1.35
LEMD3-204ENST00000542032 LEMD3Q9Y2U8 911 aa6.59□□□□□ -1.35
LEMD3-204ENST00000542032 DAGLAQ9Y4D2 1042 aa6.59□□□□□ -1.35
LEMD3-204ENST00000542032 ITGB5P18084 799 aa6.58□□□□□ -1.36
LEMD3-204ENST00000542032 DAB2P98082 770 aa6.58□□□□□ -1.36
LEMD3-204ENST00000542032 CYP27A1Q02318 531 aa6.58□□□□□ -1.36
LEMD3-204ENST00000542032 LLGL2Q6P1M3 1020 aa6.58□□□□□ -1.36
LEMD3-204ENST00000542032 OGFOD3Q6PK18 319 aa6.58□□□□□ -1.36
LEMD3-204ENST00000542032 CBLL1Q75N03 491 aa6.58□□□□□ -1.36
LEMD3-204ENST00000542032 SMYD4Q8IYR2 804 aaPredicted RBP6.58□□□□□ -1.36
LEMD3-204ENST00000542032 RNF214Q8ND24 703 aa6.58□□□□□ -1.36
LEMD3-204ENST00000542032 CBX8Q9HC52 389 aa6.58□□□□□ -1.36
LEMD3-204ENST00000542032 PRNPP04156 253 aa6.57□□□□□ -1.36
LEMD3-204ENST00000542032 ERCC3P19447 782 aa6.57□□□□□ -1.36
LEMD3-204ENST00000542032 LRRC14Q15048 493 aa6.57□□□□□ -1.36
LEMD3-204ENST00000542032 PCNX4Q63HM2 1172 aa6.57□□□□□ -1.36
LEMD3-204ENST00000542032 ZNF765Q7L2R6 523 aa6.57□□□□□ -1.36
LEMD3-204ENST00000542032 PIDD1Q9HB75 910 aa6.57□□□□□ -1.36
LEMD3-204ENST00000542032 PARP2Q9UGN5 583 aa6.57□□□□□ -1.36
LEMD3-204ENST00000542032 JAG2Q9Y219 1238 aa6.57□□□□□ -1.36
LEMD3-204ENST00000542032 HCLS1P14317 486 aaPredicted RBP6.56□□□□□ -1.36
LEMD3-204ENST00000542032 JUNBP17275 347 aaPredicted RBP6.56□□□□□ -1.36
LEMD3-204ENST00000542032 NFXL1Q6ZNB6 911 aa6.56□□□□□ -1.36
LEMD3-204ENST00000542032 TMC4Q7Z404 712 aa6.56□□□□□ -1.36
LEMD3-204ENST00000542032 GAL3ST3Q96A11 431 aa6.56□□□□□ -1.36
LEMD3-204ENST00000542032 ISL2Q96A47 359 aa6.56□□□□□ -1.36
LEMD3-204ENST00000542032 PCOLCE2Q9UKZ9 415 aa6.56□□□□□ -1.36
LEMD3-204ENST00000542032 TTF2Q9UNY4 1162 aaKnown RBP6.56□□□□□ -1.36
LEMD3-204ENST00000542032 CYP26A1O43174 497 aa6.55□□□□□ -1.36
LEMD3-204ENST00000542032 RPS26P62854 115 aaKnown RBP6.55□□□□□ -1.36
LEMD3-204ENST00000542032 PTPN11Q06124 597 aaPredicted RBP6.55□□□□□ -1.36
LEMD3-204ENST00000542032 GZF1Q9H116 711 aaPredicted RBP6.55□□□□□ -1.36
LEMD3-204ENST00000542032 FANCGO15287 622 aa6.54□□□□□ -1.36
LEMD3-204ENST00000542032 CTSHP09668 335 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms