RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 RHOXF2BP0C7M4 288 aa18.35■□□□□ 0.53
VARS2-212ENST00000542001 RHOXF2Q9BQY4 288 aa18.35■□□□□ 0.53
VARS2-212ENST00000542001 CARD6Q9BX69 1037 aa18.35■□□□□ 0.53
VARS2-212ENST00000542001 RESTQ13127 1097 aa18.35■□□□□ 0.53
VARS2-212ENST00000542001 AKNAD1Q5T1N1 836 aa18.35■□□□□ 0.53
VARS2-212ENST00000542001 TMTC2Q8N394 836 aa18.35■□□□□ 0.53
VARS2-212ENST00000542001 ZNF274Q96GC6 653 aaPredicted RBP18.35■□□□□ 0.53
VARS2-212ENST00000542001 CAPZA3Q96KX2 299 aa18.35■□□□□ 0.53
VARS2-212ENST00000542001 NRXN1Q9ULB1 1477 aa18.35■□□□□ 0.53
VARS2-212ENST00000542001 PDE8BO95263 885 aa18.34■□□□□ 0.53
VARS2-212ENST00000542001 COL9A3Q14050 684 aaPredicted RBP18.34■□□□□ 0.53
VARS2-212ENST00000542001 AK7Q96M32 723 aa18.34■□□□□ 0.53
VARS2-212ENST00000542001 HINFPQ9BQA5 517 aa18.34■□□□□ 0.53
VARS2-212ENST00000542001 GUCA1BQ9UMX6 200 aa18.34■□□□□ 0.53
VARS2-212ENST00000542001 ERVV-2B6SEH9 535 aa18.34■□□□□ 0.53
VARS2-212ENST00000542001 NAPAP54920 295 aa18.34■□□□□ 0.53
VARS2-212ENST00000542001 BMP2KQ9NSY1 1161 aaPredicted RBP18.34■□□□□ 0.53
VARS2-212ENST00000542001 KRT2P35908 639 aa18.34■□□□□ 0.53
VARS2-212ENST00000542001 ASIC1P78348 528 aa18.34■□□□□ 0.53
VARS2-212ENST00000542001 SMYD4Q8IYR2 804 aaPredicted RBP18.34■□□□□ 0.53
VARS2-212ENST00000542001 ZNF622Q969S3 477 aaKnown RBP eCLIP18.34■□□□□ 0.53
VARS2-212ENST00000542001 CCDC94Q9BW85 323 aaPredicted RBP18.34■□□□□ 0.53
VARS2-212ENST00000542001 ATP1A3P13637 1013 aa18.34■□□□□ 0.53
VARS2-212ENST00000542001 LETM2Q2VYF4 491 aa18.34■□□□□ 0.53
VARS2-212ENST00000542001 ZNF569Q5MCW4 686 aa18.33■□□□□ 0.53
VARS2-212ENST00000542001 TCERG1LQ5VWI1 586 aa18.33■□□□□ 0.53
VARS2-212ENST00000542001 KAZALD1Q96I82 304 aa18.33■□□□□ 0.53
VARS2-212ENST00000542001 TMEM87BQ96K49 555 aa18.33■□□□□ 0.53
VARS2-212ENST00000542001 MMRN2Q9H8L6 949 aa18.33■□□□□ 0.53
VARS2-212ENST00000542001 JADE2Q9NQC1 790 aa18.33■□□□□ 0.53
VARS2-212ENST00000542001 PIH1D3Q9NQM4 214 aaKnown RBP18.33■□□□□ 0.53
VARS2-212ENST00000542001 PCDHA5Q9Y5H7 936 aa18.33■□□□□ 0.53
VARS2-212ENST00000542001 CARMIL3Q8ND23 1372 aa18.33■□□□□ 0.52
VARS2-212ENST00000542001 ERCC6LQ2NKX8 1250 aa18.33■□□□□ 0.52
VARS2-212ENST00000542001 BAG1Q99933 345 aaPredicted RBP18.33■□□□□ 0.52
VARS2-212ENST00000542001 YEATS4O95619 227 aa18.33■□□□□ 0.52
VARS2-212ENST00000542001 ZNF654Q8IZM8 581 aa18.33■□□□□ 0.52
VARS2-212ENST00000542001 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.33■□□□□ 0.52
VARS2-212ENST00000542001 MCAMP43121 646 aa18.32■□□□□ 0.52
VARS2-212ENST00000542001 CT47A1Q5JQC4 288 aaPredicted RBP18.32■□□□□ 0.52
VARS2-212ENST00000542001 APOA5Q6Q788 366 aa18.32■□□□□ 0.52
VARS2-212ENST00000542001 BAG3O95817 575 aa18.32■□□□□ 0.52
VARS2-212ENST00000542001 PCCAP05165 728 aaPredicted RBP18.32■□□□□ 0.52
VARS2-212ENST00000542001 DYNLL1P63167 89 aaKnown RBP18.32■□□□□ 0.52
VARS2-212ENST00000542001 GIGYF2Q6Y7W6 1299 aaKnown RBP18.32■□□□□ 0.52
VARS2-212ENST00000542001 KIAA1524Q8TCG1 905 aa18.32■□□□□ 0.52
VARS2-212ENST00000542001 CTNND2Q9UQB3 1225 aa18.32■□□□□ 0.52
VARS2-212ENST00000542001 ACBD3Q9H3P7 528 aa18.32■□□□□ 0.52
VARS2-212ENST00000542001 CCDC87Q9NVE4 849 aa18.32■□□□□ 0.52
VARS2-212ENST00000542001 TNNI2P48788 182 aa18.31■□□□□ 0.52
VARS2-212ENST00000542001 SPA17Q15506 151 aa18.31■□□□□ 0.52
VARS2-212ENST00000542001 OVOS2A0A0J9YW53 1432 aa18.31■□□□□ 0.52
VARS2-212ENST00000542001 OVOS2Q6IE36 1432 aa18.31■□□□□ 0.52
VARS2-212ENST00000542001 ERLIN1O75477 346 aa18.31■□□□□ 0.52
VARS2-212ENST00000542001 GOLGA8HP0CJ92 632 aa18.31■□□□□ 0.52
VARS2-212ENST00000542001 CASP1P29466 404 aa18.31■□□□□ 0.52
VARS2-212ENST00000542001 NLRP12P59046 1061 aa18.31■□□□□ 0.52
VARS2-212ENST00000542001 LRRC8AQ8IWT6 810 aa18.31■□□□□ 0.52
VARS2-212ENST00000542001 MAP2P11137 1827 aaKnown RBP18.31■□□□□ 0.52
VARS2-212ENST00000542001 H7C1W4 665 aa18.31■□□□□ 0.52
VARS2-212ENST00000542001 UBXN1Q04323 297 aa18.31■□□□□ 0.52
VARS2-212ENST00000542001 MAPKAPK5Q8IW41 473 aa18.31■□□□□ 0.52
VARS2-212ENST00000542001 ZSWIM5Q9P217 1185 aa18.31■□□□□ 0.52
VARS2-212ENST00000542001 DENND2AQ9ULE3 1009 aa18.31■□□□□ 0.52
VARS2-212ENST00000542001 USP31Q70CQ4 1352 aa18.3■□□□□ 0.52
VARS2-212ENST00000542001 RPAP1Q9BWH6 1393 aaPredicted RBP18.3■□□□□ 0.52
VARS2-212ENST00000542001 RAD51AP2Q09MP3 1159 aa18.3■□□□□ 0.52
VARS2-212ENST00000542001 NLRP10Q86W26 655 aa18.3■□□□□ 0.52
VARS2-212ENST00000542001 IGSF22Q8N9C0 903 aa18.3■□□□□ 0.52
VARS2-212ENST00000542001 GOLPH3LQ9H4A5 285 aa18.3■□□□□ 0.52
VARS2-212ENST00000542001 TAB2Q9NYJ8 693 aa18.3■□□□□ 0.52
VARS2-212ENST00000542001 DEXIO95424 95 aa18.3■□□□□ 0.52
VARS2-212ENST00000542001 RILPL1Q5EBL4 403 aa18.3■□□□□ 0.52
VARS2-212ENST00000542001 KANK3Q6NY19 840 aa18.3■□□□□ 0.52
VARS2-212ENST00000542001 TPTE2Q6XPS3 522 aa18.3■□□□□ 0.52
VARS2-212ENST00000542001 ADAMTS13Q76LX8 1427 aa18.3■□□□□ 0.52
VARS2-212ENST00000542001 TNKSO95271 1327 aa18.3■□□□□ 0.52
VARS2-212ENST00000542001 CCDC66A2RUB6 948 aa18.3■□□□□ 0.52
VARS2-212ENST00000542001 LMAN1P49257 510 aa18.3■□□□□ 0.52
VARS2-212ENST00000542001 LEKR1Q6ZMV7 388 aa18.3■□□□□ 0.52
VARS2-212ENST00000542001 COL3A1P02461 1466 aaPredicted RBP18.3■□□□□ 0.52
VARS2-212ENST00000542001 HIBADHP31937 336 aaKnown RBP18.29■□□□□ 0.52
VARS2-212ENST00000542001 POSTNQ15063 836 aa18.29■□□□□ 0.52
VARS2-212ENST00000542001 KRT222Q8N1A0 295 aa18.29■□□□□ 0.52
VARS2-212ENST00000542001 RASGRP4Q8TDF6 673 aa18.29■□□□□ 0.52
VARS2-212ENST00000542001 GPKOWQ92917 476 aaPredicted RBP eCLIP18.29■□□□□ 0.527e-6■■■■■ 33.4
VARS2-212ENST00000542001 PDLIM2Q96JY6 352 aa18.29■□□□□ 0.52
VARS2-212ENST00000542001 MAP3K15Q6ZN16 1313 aa18.29■□□□□ 0.52
VARS2-212ENST00000542001 CEP170BQ9Y4F5 1589 aaPredicted RBP18.29■□□□□ 0.52
VARS2-212ENST00000542001 PTPRUQ92729 1446 aa18.29■□□□□ 0.52
VARS2-212ENST00000542001 AKR1B10O60218 316 aa18.29■□□□□ 0.52
VARS2-212ENST00000542001 EVCP57679 992 aa18.29■□□□□ 0.52
VARS2-212ENST00000542001 LCORLQ8N3X6 602 aa18.29■□□□□ 0.52
VARS2-212ENST00000542001 LINC00301Q8NCQ3 95 aa18.29■□□□□ 0.52
VARS2-212ENST00000542001 TTLL11Q8NHH1 800 aa18.29■□□□□ 0.52
VARS2-212ENST00000542001 PSMB7Q99436 277 aa18.29■□□□□ 0.52
VARS2-212ENST00000542001 RCOR1Q9UKL0 485 aa18.29■□□□□ 0.52
VARS2-212ENST00000542001 ZC3H13Q5T200 1668 aaKnown RBP18.29■□□□□ 0.52
VARS2-212ENST00000542001 CHRNDQ07001 517 aa18.29■□□□□ 0.52
VARS2-212ENST00000542001 CLEC17AQ6ZS10 378 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms