RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 AK9Q5TCS8 1911 aa18.82■□□□□ 0.6
UBE3B-211ENST00000539843 MECOMQ03112 1051 aa18.81■□□□□ 0.6
UBE3B-211ENST00000539843 SLC4A8Q2Y0W8 1093 aa18.81■□□□□ 0.6
UBE3B-211ENST00000539843 HMG20BQ9P0W2 317 aa18.81■□□□□ 0.6
UBE3B-211ENST00000539843 LRP2BPQ9P2M1 347 aa18.81■□□□□ 0.6
UBE3B-211ENST00000539843 GPR75-ASB3A0A0A6YYF3 556 aa18.8■□□□□ 0.6
UBE3B-211ENST00000539843 ARID4AP29374 1257 aaPredicted RBP18.8■□□□□ 0.6
UBE3B-211ENST00000539843 TTC39AQ5SRH9 613 aa18.8■□□□□ 0.6
UBE3B-211ENST00000539843 TMEM57Q8N5G2 664 aa18.8■□□□□ 0.6
UBE3B-211ENST00000539843 PTCH2Q9Y6C5 1203 aa18.8■□□□□ 0.6
UBE3B-211ENST00000539843 ZHX2Q9Y6X8 837 aa18.8■□□□□ 0.6
UBE3B-211ENST00000539843 PNMA6EA0A0J9YXQ4 647 aa18.79■□□□□ 0.6
UBE3B-211ENST00000539843 CTNND1O60716 968 aaKnown RBP18.79■□□□□ 0.6
UBE3B-211ENST00000539843 NPM3O75607 178 aaKnown RBP18.79■□□□□ 0.6
UBE3B-211ENST00000539843 SLC34A2O95436 690 aa18.79■□□□□ 0.6
UBE3B-211ENST00000539843 FMNL1O95466 1100 aaPredicted RBP18.79■□□□□ 0.6
UBE3B-211ENST00000539843 BAG3O95817 575 aa18.79■□□□□ 0.6
UBE3B-211ENST00000539843 ITPRIPQ8IWB1 547 aa18.79■□□□□ 0.6
UBE3B-211ENST00000539843 ZFPM1Q8IX07 1006 aa18.79■□□□□ 0.6
UBE3B-211ENST00000539843 GCC1Q96CN9 775 aa18.79■□□□□ 0.6
UBE3B-211ENST00000539843 GPR108Q9NPR9 543 aa18.79■□□□□ 0.6
UBE3B-211ENST00000539843 CPA4Q9UI42 421 aa18.79■□□□□ 0.6
UBE3B-211ENST00000539843 PLCG2P16885 1265 aa18.78■□□□□ 0.6
UBE3B-211ENST00000539843 ZNF333Q96JL9 665 aa18.78■□□□□ 0.6
UBE3B-211ENST00000539843 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.78■□□□□ 0.6
UBE3B-211ENST00000539843 RFX7Q2KHR2 1363 aa18.78■□□□□ 0.6
UBE3B-211ENST00000539843 MYH2Q9UKX2 1941 aa18.78■□□□□ 0.6
UBE3B-211ENST00000539843 POTEFA5A3E0 1075 aa18.77■□□□□ 0.6
UBE3B-211ENST00000539843 IGSF3O75054 1194 aa18.77■□□□□ 0.6
UBE3B-211ENST00000539843 SURF6O75683 361 aaKnown RBP18.77■□□□□ 0.6
UBE3B-211ENST00000539843 PTPRAP18433 802 aa18.77■□□□□ 0.6
UBE3B-211ENST00000539843 PSMC4P43686 418 aa18.77■□□□□ 0.6
UBE3B-211ENST00000539843 C17orf99Q6UX52 265 aa18.77■□□□□ 0.6
UBE3B-211ENST00000539843 GADL1Q6ZQY3 521 aa18.77■□□□□ 0.6
UBE3B-211ENST00000539843 RAET1EQ8TD07 263 aa18.77■□□□□ 0.6
UBE3B-211ENST00000539843 NSUN4Q96CB9 384 aaKnown RBP18.77■□□□□ 0.6
UBE3B-211ENST00000539843 DOCK2Q92608 1830 aa18.77■□□□□ 0.59
UBE3B-211ENST00000539843 DDTLA6NHG4 134 aaPredicted RBP18.76■□□□□ 0.59
UBE3B-211ENST00000539843 PHF20L1A8MW92 1017 aa18.76■□□□□ 0.59
UBE3B-211ENST00000539843 FCGRTP55899 365 aa18.76■□□□□ 0.59
UBE3B-211ENST00000539843 TNNI3KQ59H18 835 aa18.76■□□□□ 0.59
UBE3B-211ENST00000539843 DIEXFQ68CQ4 756 aaKnown RBP18.76■□□□□ 0.59
UBE3B-211ENST00000539843 TEX11Q8IYF3 940 aa18.76■□□□□ 0.59
UBE3B-211ENST00000539843 SMCR8Q8TEV9 937 aaPredicted RBP18.76■□□□□ 0.59
UBE3B-211ENST00000539843 TRIM34Q9BYJ4 488 aa18.76■□□□□ 0.59
UBE3B-211ENST00000539843 TBC1D2Q9BYX2 928 aa18.76■□□□□ 0.59
UBE3B-211ENST00000539843 DDX4Q9NQI0 724 aaKnown RBP18.76■□□□□ 0.59
UBE3B-211ENST00000539843 TNNQ9UQP3 1299 aa18.76■□□□□ 0.59
UBE3B-211ENST00000539843 SLC45A1Q9Y2W3 748 aa18.76■□□□□ 0.59
UBE3B-211ENST00000539843 FPGT-TNNI3KV9GXZ4 949 aa18.76■□□□□ 0.59
UBE3B-211ENST00000539843 ATRNL1Q5VV63 1379 aa18.76■□□□□ 0.59
UBE3B-211ENST00000539843 A0A0G2JLL6 359 aaPredicted RBP18.75■□□□□ 0.59
UBE3B-211ENST00000539843 TBC1D12O60347 775 aa18.75■□□□□ 0.59
UBE3B-211ENST00000539843 MCAMP43121 646 aa18.75■□□□□ 0.59
UBE3B-211ENST00000539843 ATP8B2P98198 1209 aa18.75■□□□□ 0.59
UBE3B-211ENST00000539843 MAP3K10Q02779 954 aa18.75■□□□□ 0.59
UBE3B-211ENST00000539843 POLA2Q14181 598 aa18.75■□□□□ 0.59
UBE3B-211ENST00000539843 NAA16Q6N069 864 aaPredicted RBP18.75■□□□□ 0.59
UBE3B-211ENST00000539843 TBC1D9Q6ZT07 1266 aa18.75■□□□□ 0.59
UBE3B-211ENST00000539843 PRRT2Q7Z6L0 340 aaPredicted RBP18.75■□□□□ 0.59
UBE3B-211ENST00000539843 ARHGAP39Q9C0H5 1083 aa18.75■□□□□ 0.59
UBE3B-211ENST00000539843 OSBPL5Q9H0X9 879 aaPredicted RBP18.75■□□□□ 0.59
UBE3B-211ENST00000539843 SRRDQ9UH36 339 aa18.75■□□□□ 0.59
UBE3B-211ENST00000539843 PNMA3Q9UL41 463 aa18.75■□□□□ 0.59
UBE3B-211ENST00000539843 COL2A1P02458 1487 aaPredicted RBP18.74■□□□□ 0.59
UBE3B-211ENST00000539843 ECM2O94769 699 aaPredicted RBP18.74■□□□□ 0.59
UBE3B-211ENST00000539843 MS4A1P11836 297 aa18.74■□□□□ 0.59
UBE3B-211ENST00000539843 RHBDL3P58872 404 aa18.74■□□□□ 0.59
UBE3B-211ENST00000539843 PI16Q6UXB8 463 aa18.74■□□□□ 0.59
UBE3B-211ENST00000539843 SH3BP5LQ7L8J4 393 aa18.74■□□□□ 0.59
UBE3B-211ENST00000539843 SSH3Q8TE77 659 aa18.74■□□□□ 0.59
UBE3B-211ENST00000539843 TRIM47Q96LD4 638 aa18.74■□□□□ 0.59
UBE3B-211ENST00000539843 DHX36Q9H2U1 1008 aaKnown RBP18.74■□□□□ 0.59
UBE3B-211ENST00000539843 AFG3L2Q9Y4W6 797 aa18.74■□□□□ 0.59
UBE3B-211ENST00000539843 MYPNQ86TC9 1320 aa18.74■□□□□ 0.59
UBE3B-211ENST00000539843 TRIM75PA6NK02 468 aa18.73■□□□□ 0.59
UBE3B-211ENST00000539843 EN2P19622 333 aaPredicted RBP18.73■□□□□ 0.59
UBE3B-211ENST00000539843 UBXN2AP68543 259 aa18.73■□□□□ 0.59
UBE3B-211ENST00000539843 PABPC4Q13310 644 aaKnown RBP eCLIP18.73■□□□□ 0.59
UBE3B-211ENST00000539843 SH3TC2Q8TF17 1288 aa18.73■□□□□ 0.59
UBE3B-211ENST00000539843 AS3MTQ9HBK9 375 aa18.73■□□□□ 0.59
UBE3B-211ENST00000539843 BIN2Q9UBW5 565 aaPredicted RBP18.73■□□□□ 0.59
UBE3B-211ENST00000539843 HERC5Q9UII4 1024 aaKnown RBP18.73■□□□□ 0.59
UBE3B-211ENST00000539843 MYCP01106 439 aaPredicted RBP18.72■□□□□ 0.59
UBE3B-211ENST00000539843 CYP2C8P10632 490 aa18.72■□□□□ 0.59
UBE3B-211ENST00000539843 CAP1Q01518 475 aa18.72■□□□□ 0.59
UBE3B-211ENST00000539843 CERS3Q8IU89 383 aa18.72■□□□□ 0.59
UBE3B-211ENST00000539843 ERC1Q8IUD2 1116 aa18.72■□□□□ 0.59
UBE3B-211ENST00000539843 NKX2-3Q8TAU0 364 aa18.72■□□□□ 0.59
UBE3B-211ENST00000539843 DBNDD2Q9BQY9 259 aa18.72■□□□□ 0.59
UBE3B-211ENST00000539843 C1orf115Q9H7X2 142 aa18.72■□□□□ 0.59
UBE3B-211ENST00000539843 OSBPP22059 807 aa18.71■□□□□ 0.59
UBE3B-211ENST00000539843 GRK4P32298 578 aa18.71■□□□□ 0.59
UBE3B-211ENST00000539843 MOGSQ13724 837 aa18.71■□□□□ 0.59
UBE3B-211ENST00000539843 GPAT2Q6NUI2 795 aa18.71■□□□□ 0.59
UBE3B-211ENST00000539843 MIER1Q8N108 512 aa18.71■□□□□ 0.59
UBE3B-211ENST00000539843 ZNF512BQ96KM6 892 aaPredicted RBP18.71■□□□□ 0.59
UBE3B-211ENST00000539843 SNRKQ9NRH2 765 aa18.71■□□□□ 0.59
UBE3B-211ENST00000539843 AATFQ9NY61 560 aaKnown RBP eCLIP18.71■□□□□ 0.59
UBE3B-211ENST00000539843 PI4KBQ9UBF8 816 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms