RNA–Protein interactions for RNA: ENST00000537551.5

CHFR-215, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 2

Gene CHFR, Length 596 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-215	ENST00000537551	TSKS	Q9UJT2	592 aa		28.25	■■■□□ 2.11
CHFR-215	ENST00000537551	MYO5A	Q9Y4I1	1855 aa	Known RBP	28.24	■■■□□ 2.11
CHFR-215	ENST00000537551	HSPA8	P11142	646 aa	Known RBP	28.24	■■■□□ 2.11
CHFR-215	ENST00000537551	PPP4C	P60510	307 aa		28.24	■■■□□ 2.11
CHFR-215	ENST00000537551	ADGRA1	Q86SQ6	560 aa		28.24	■■■□□ 2.11
CHFR-215	ENST00000537551	EXOC6	Q8TAG9	804 aa		28.24	■■■□□ 2.11
CHFR-215	ENST00000537551	VGLL4	Q14135	290 aa		28.23	■■■□□ 2.11
CHFR-215	ENST00000537551	ZBTB47	Q9UFB7	747 aa	Predicted RBP	28.23	■■■□□ 2.11
CHFR-215	ENST00000537551	RFX7	Q2KHR2	1363 aa		28.23	■■■□□ 2.11
CHFR-215	ENST00000537551	MAST2	Q6P0Q8	1798 aa		28.22	■■■□□ 2.11
CHFR-215	ENST00000537551	NPM3	O75607	178 aa	Known RBP	28.22	■■■□□ 2.11
CHFR-215	ENST00000537551	ZBTB48	P10074	688 aa	Predicted RBP	28.22	■■■□□ 2.11
CHFR-215	ENST00000537551	SREBF2	Q12772	1141 aa		28.22	■■■□□ 2.11
CHFR-215	ENST00000537551	GPATCH3	Q96I76	525 aa		28.22	■■■□□ 2.11
CHFR-215	ENST00000537551	ECHDC1	Q9NTX5	307 aa		28.22	■■■□□ 2.11
CHFR-215	ENST00000537551	PAG1	Q9NWQ8	432 aa		28.22	■■■□□ 2.11
CHFR-215	ENST00000537551	DDTL	A6NHG4	134 aa	Predicted RBP	28.21	■■■□□ 2.11
CHFR-215	ENST00000537551	TRPA1	O75762	1119 aa		28.21	■■■□□ 2.11
CHFR-215	ENST00000537551	COL13A1	Q5TAT6	717 aa	Predicted RBP	28.21	■■■□□ 2.11
CHFR-215	ENST00000537551	TMED8	Q6PL24	325 aa	Predicted RBP	28.21	■■■□□ 2.11
CHFR-215	ENST00000537551	SH3BP5L	Q7L8J4	393 aa		28.21	■■■□□ 2.11
CHFR-215	ENST00000537551	MIGA1	Q8NAN2	632 aa		28.21	■■■□□ 2.11
CHFR-215	ENST00000537551	ZKSCAN4	Q969J2	545 aa	Predicted RBP	28.21	■■■□□ 2.11
CHFR-215	ENST00000537551	OPTN	Q96CV9	577 aa		28.21	■■■□□ 2.11
CHFR-215	ENST00000537551	EDC3	Q96F86	508 aa	Known RBP	28.21	■■■□□ 2.11
CHFR-215	ENST00000537551	HAUS7	Q99871	368 aa		28.21	■■■□□ 2.11
CHFR-215	ENST00000537551	RNF186	Q9NXI6	227 aa		28.21	■■■□□ 2.11
CHFR-215	ENST00000537551	DYNLL1	P63167	89 aa	Known RBP	28.2	■■■□□ 2.1
CHFR-215	ENST00000537551	HDAC1	Q13547	482 aa	Predicted RBP	28.2	■■■□□ 2.1
CHFR-215	ENST00000537551	SLC9C2	Q5TAH2	1124 aa		28.2	■■■□□ 2.1
CHFR-215	ENST00000537551	PRDM10	Q9NQV6	1147 aa		28.2	■■■□□ 2.1
CHFR-215	ENST00000537551	MANSC4	A6NHS7	340 aa	Predicted RBP	28.19	■■■□□ 2.1
CHFR-215	ENST00000537551	TM4SF4	P48230	202 aa		28.19	■■■□□ 2.1
CHFR-215	ENST00000537551	TGFBRAP1	Q8WUH2	860 aa		28.19	■■■□□ 2.1
CHFR-215	ENST00000537551	OSBPL5	Q9H0X9	879 aa	Predicted RBP	28.19	■■■□□ 2.1
CHFR-215	ENST00000537551	INPP5B	P32019	993 aa		28.18	■■■□□ 2.1
CHFR-215	ENST00000537551	GJA5	P36382	358 aa		28.18	■■■□□ 2.1
CHFR-215	ENST00000537551	ANKRD45	Q5TZF3	282 aa		28.18	■■■□□ 2.1
CHFR-215	ENST00000537551	CERS3	Q8IU89	383 aa		28.18	■■■□□ 2.1
CHFR-215	ENST00000537551	GCC1	Q96CN9	775 aa		28.18	■■■□□ 2.1
CHFR-215	ENST00000537551	SAGE1	Q9NXZ1	904 aa		28.18	■■■□□ 2.1
CHFR-215	ENST00000537551	PDE6A	P16499	860 aa		28.17	■■■□□ 2.1
CHFR-215	ENST00000537551	INHBE	P58166	350 aa		28.17	■■■□□ 2.1
CHFR-215	ENST00000537551	MAPKAPK5	Q8IW41	473 aa		28.17	■■■□□ 2.1
CHFR-215	ENST00000537551	CNKSR2	Q8WXI2	1034 aa		28.17	■■■□□ 2.1
CHFR-215	ENST00000537551	RWDD1	Q9H446	243 aa	Predicted RBP	28.17	■■■□□ 2.1
CHFR-215	ENST00000537551	ZNF112	Q9UJU3	913 aa		28.17	■■■□□ 2.1
CHFR-215	ENST00000537551	SNCAIP	Q9Y6H5	919 aa		28.17	■■■□□ 2.1
CHFR-215	ENST00000537551	OTOF	Q9HC10	1997 aa		28.17	■■■□□ 2.1
CHFR-215	ENST00000537551	OTUD5	Q96G74	571 aa		28.16	■■■□□ 2.1
CHFR-215	ENST00000537551	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	28.16	■■■□□ 2.1
CHFR-215	ENST00000537551	TSHZ3	Q63HK5	1081 aa		28.15	■■■□□ 2.1
CHFR-215	ENST00000537551	ERO1B	Q86YB8	467 aa		28.15	■■■□□ 2.1
CHFR-215	ENST00000537551	DOCK2	Q92608	1830 aa		28.15	■■■□□ 2.1
CHFR-215	ENST00000537551	ZNF532	Q9HCE3	1301 aa		28.15	■■■□□ 2.1
CHFR-215	ENST00000537551	ATRNL1	Q5VV63	1379 aa		28.14	■■■□□ 2.1
CHFR-215	ENST00000537551	MAGEB6P1	A0A0J9YX57	407 aa		28.14	■■■□□ 2.1
CHFR-215	ENST00000537551	SPDYE5	A6NIY4	337 aa		28.14	■■■□□ 2.1
CHFR-215	ENST00000537551	USP5	P45974	858 aa		28.14	■■■□□ 2.1
CHFR-215	ENST00000537551	SLURP2	P0DP57	97 aa		28.13	■■■□□ 2.09
CHFR-215	ENST00000537551	IRX6	P78412	446 aa	Predicted RBP	28.13	■■■□□ 2.09
CHFR-215	ENST00000537551	MAP3K10	Q02779	954 aa		28.13	■■■□□ 2.09
CHFR-215	ENST00000537551	DHX36	Q9H2U1	1008 aa	Known RBP	28.13	■■■□□ 2.09
CHFR-215	ENST00000537551	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	28.13	■■■□□ 2.09
CHFR-215	ENST00000537551	FLT1	P17948	1338 aa		28.13	■■■□□ 2.09
CHFR-215	ENST00000537551	COL2A1	P02458	1487 aa	Predicted RBP	28.11	■■■□□ 2.09
CHFR-215	ENST00000537551	PHF20L1	A8MW92	1017 aa		28.11	■■■□□ 2.09
CHFR-215	ENST00000537551	ERC2	O15083	957 aa		28.11	■■■□□ 2.09
CHFR-215	ENST00000537551	TBC1D12	O60347	775 aa		28.11	■■■□□ 2.09
CHFR-215	ENST00000537551	GTF2A2	P52657	109 aa		28.11	■■■□□ 2.09
CHFR-215	ENST00000537551	IFNL1	Q8IU54	200 aa		28.11	■■■□□ 2.09
CHFR-215	ENST00000537551	OTUD7A	Q8TE49	926 aa	Predicted RBP	28.11	■■■□□ 2.09
CHFR-215	ENST00000537551	PI4KB	Q9UBF8	816 aa		28.11	■■■□□ 2.09
CHFR-215	ENST00000537551	SAP30BP	Q9UHR5	308 aa	Known RBP	28.11	■■■□□ 2.09
CHFR-215	ENST00000537551	TTC41P	Q6P2S7	1318 aa		28.11	■■■□□ 2.09
CHFR-215	ENST00000537551	TCRBV5S4A2T	A0A5A2	114 aa		28.1	■■■□□ 2.09
CHFR-215	ENST00000537551	ALDH1A1	P00352	501 aa		28.1	■■■□□ 2.09
CHFR-215	ENST00000537551	ADD2	P35612	726 aa		28.1	■■■□□ 2.09
CHFR-215	ENST00000537551	PPAT	Q06203	517 aa		28.1	■■■□□ 2.09
CHFR-215	ENST00000537551	NOL9	Q5SY16	702 aa	Known RBP	28.1	■■■□□ 2.09
CHFR-215	ENST00000537551	OTUD7B	Q6GQQ9	843 aa		28.1	■■■□□ 2.09
CHFR-215	ENST00000537551	ZSCAN25	Q6NSZ9	544 aa		28.1	■■■□□ 2.09
CHFR-215	ENST00000537551	RIOK1	Q9BRS2	568 aa	Known RBP	28.1	■■■□□ 2.09
CHFR-215	ENST00000537551	PALD1	Q9ULE6	856 aa		28.1	■■■□□ 2.09
CHFR-215	ENST00000537551	FAM196B	A6NMK8	535 aa		28.09	■■■□□ 2.09
CHFR-215	ENST00000537551	TBC1D8	O95759	1140 aa		28.09	■■■□□ 2.09
CHFR-215	ENST00000537551	PPIL2	Q13356	520 aa		28.09	■■■□□ 2.09
CHFR-215	ENST00000537551	TNS4	Q8IZW8	715 aa		28.09	■■■□□ 2.09
CHFR-215	ENST00000537551	MS4A4A	Q96JQ5	239 aa		28.09	■■■□□ 2.09
CHFR-215	ENST00000537551	TRIM34	Q9BYJ4	488 aa		28.09	■■■□□ 2.09
CHFR-215	ENST00000537551	PICK1	Q9NRD5	415 aa		28.09	■■■□□ 2.09
CHFR-215	ENST00000537551	CCL15-CCL14	A0A0B4J2E2	113 aa		28.08	■■■□□ 2.09
CHFR-215	ENST00000537551	IRF6	O14896	467 aa		28.08	■■■□□ 2.09
CHFR-215	ENST00000537551	HLA-DOA	P06340	250 aa		28.08	■■■□□ 2.09
CHFR-215	ENST00000537551	MX1	P20591	662 aa		28.08	■■■□□ 2.09
CHFR-215	ENST00000537551	CCL15	Q16663	113 aa		28.08	■■■□□ 2.09
CHFR-215	ENST00000537551	SCYL3	Q8IZE3	742 aa		28.08	■■■□□ 2.09
CHFR-215	ENST00000537551	CRNKL1	Q9BZJ0	848 aa	Known RBP	28.08	■■■□□ 2.09
CHFR-215	ENST00000537551	HERC5	Q9UII4	1024 aa	Known RBP	28.08	■■■□□ 2.09
CHFR-215	ENST00000537551	TESPA1	A2RU30	521 aa	Predicted RBP	28.07	■■■□□ 2.08

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