RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 SPATA5Q8NB90 893 aa20.67■□□□□ 0.9
RAB40C-203ENST00000535977 MRFAP1L1Q96HT8 127 aa20.67■□□□□ 0.9
RAB40C-203ENST00000535977 UTP14AQ9BVJ6 771 aaKnown RBP20.67■□□□□ 0.9
RAB40C-203ENST00000535977 CNNM2Q9H8M5 875 aa20.67■□□□□ 0.9
RAB40C-203ENST00000535977 GEMIN8Q9NWZ8 242 aaKnown RBP20.67■□□□□ 0.9
RAB40C-203ENST00000535977 BECN2A8MW95 431 aa20.67■□□□□ 0.9
RAB40C-203ENST00000535977 TEX35Q5T0J7 233 aa20.67■□□□□ 0.9
RAB40C-203ENST00000535977 C10orf67Q8IYJ2 551 aa20.67■□□□□ 0.9
RAB40C-203ENST00000535977 CEP57L1Q8IYX8 460 aa20.67■□□□□ 0.9
RAB40C-203ENST00000535977 MPHOSPH8Q99549 860 aa20.67■□□□□ 0.9
RAB40C-203ENST00000535977 THRAP3Q9Y2W1 955 aaKnown RBP20.67■□□□□ 0.9
RAB40C-203ENST00000535977 NEMFO60524 1076 aa20.66■□□□□ 0.9
RAB40C-203ENST00000535977 GNAT2P19087 354 aa20.66■□□□□ 0.9
RAB40C-203ENST00000535977 SDF4Q9BRK5 362 aa20.66■□□□□ 0.9
RAB40C-203ENST00000535977 NBPF3Q9H094 633 aa20.66■□□□□ 0.9
RAB40C-203ENST00000535977 NUTM2BA6NNL0 878 aaPredicted RBP20.66■□□□□ 0.9
RAB40C-203ENST00000535977 NUTM2EB1AL46 878 aaPredicted RBP20.66■□□□□ 0.9
RAB40C-203ENST00000535977 SGMS1Q86VZ5 419 aa20.66■□□□□ 0.9
RAB40C-203ENST00000535977 NUTM2AQ8IVF1 878 aaPredicted RBP20.66■□□□□ 0.9
RAB40C-203ENST00000535977 LRRN4CLQ8ND94 238 aa20.66■□□□□ 0.9
RAB40C-203ENST00000535977 CCDC87Q9NVE4 849 aa20.66■□□□□ 0.9
RAB40C-203ENST00000535977 LCMT1Q9UIC8 334 aa20.66■□□□□ 0.9
RAB40C-203ENST00000535977 RTL9Q8NET4 1388 aa20.66■□□□□ 0.9
RAB40C-203ENST00000535977 LIFRP42702 1097 aa20.65■□□□□ 0.9
RAB40C-203ENST00000535977 KIF23Q02241 960 aaPredicted RBP20.65■□□□□ 0.9
RAB40C-203ENST00000535977 TBC1D10CQ8IV04 446 aa20.65■□□□□ 0.9
RAB40C-203ENST00000535977 MYO1CO00159 1063 aa20.65■□□□□ 0.9
RAB40C-203ENST00000535977 SKILP12757 684 aa20.65■□□□□ 0.9
RAB40C-203ENST00000535977 GYS2P54840 703 aa20.65■□□□□ 0.9
RAB40C-203ENST00000535977 CCDC152Q4G0S7 254 aa20.65■□□□□ 0.9
RAB40C-203ENST00000535977 ANO1Q5XXA6 986 aa20.65■□□□□ 0.9
RAB40C-203ENST00000535977 MTA3Q9BTC8 594 aa20.65■□□□□ 0.9
RAB40C-203ENST00000535977 PHLPP1O60346 1717 aa20.65■□□□□ 0.9
RAB40C-203ENST00000535977 ST5P78524 1137 aa20.64■□□□□ 0.9
RAB40C-203ENST00000535977 ZRSR1Q15695 479 aaKnown RBP20.64■□□□□ 0.9
RAB40C-203ENST00000535977 APOA5Q6Q788 366 aa20.64■□□□□ 0.9
RAB40C-203ENST00000535977 JMYQ8N9B5 988 aa20.64■□□□□ 0.9
RAB40C-203ENST00000535977 KRT23Q9C075 422 aa20.64■□□□□ 0.9
RAB40C-203ENST00000535977 CLIC4Q9Y696 253 aa20.64■□□□□ 0.9
RAB40C-203ENST00000535977 COL22A1Q8NFW1 1626 aaPredicted RBP20.64■□□□□ 0.9
RAB40C-203ENST00000535977 POLR3DP05423 398 aaPredicted RBP20.64■□□□□ 0.89
RAB40C-203ENST00000535977 CMA1P23946 247 aa20.64■□□□□ 0.89
RAB40C-203ENST00000535977 CYB5R4Q7L1T6 521 aa20.64■□□□□ 0.89
RAB40C-203ENST00000535977 IGDCC4Q8TDY8 1250 aa20.64■□□□□ 0.89
RAB40C-203ENST00000535977 SMARCE1Q969G3 411 aa20.64■□□□□ 0.89
RAB40C-203ENST00000535977 WWC3Q9ULE0 1092 aa20.64■□□□□ 0.89
RAB40C-203ENST00000535977 ZBTB43O43298 467 aa20.63■□□□□ 0.89
RAB40C-203ENST00000535977 SUSD4Q5VX71 490 aa20.63■□□□□ 0.89
RAB40C-203ENST00000535977 C11orf57Q6ZUT1 292 aaPredicted RBP20.63■□□□□ 0.89
RAB40C-203ENST00000535977 BPIFA3Q9BQP9 254 aa20.63■□□□□ 0.89
RAB40C-203ENST00000535977 ALG1Q9BT22 464 aa20.63■□□□□ 0.89
RAB40C-203ENST00000535977 C4AP0C0L4 1744 aa20.63■□□□□ 0.89
RAB40C-203ENST00000535977 C4BP0C0L5 1744 aa20.63■□□□□ 0.89
RAB40C-203ENST00000535977 GTF2A1P52655 376 aaPredicted RBP20.63■□□□□ 0.89
RAB40C-203ENST00000535977 INTS5Q6P9B9 1019 aaKnown RBP20.63■□□□□ 0.89
RAB40C-203ENST00000535977 NACAP1Q9BZK3 213 aa20.63■□□□□ 0.89
RAB40C-203ENST00000535977 NAPBQ9H115 298 aa20.63■□□□□ 0.89
RAB40C-203ENST00000535977 KAT6BQ8WYB5 2073 aa20.63■□□□□ 0.89
RAB40C-203ENST00000535977 WNK3Q9BYP7 1800 aa20.63■□□□□ 0.89
RAB40C-203ENST00000535977 PPFIA3O75145 1194 aa20.62■□□□□ 0.89
RAB40C-203ENST00000535977 IGHMBP2P38935 993 aaKnown RBP20.62■□□□□ 0.89
RAB40C-203ENST00000535977 TPM4P67936 248 aa20.62■□□□□ 0.89
RAB40C-203ENST00000535977 SLC39A14Q15043 492 aa20.62■□□□□ 0.89
RAB40C-203ENST00000535977 OTUD7BQ6GQQ9 843 aa20.62■□□□□ 0.89
RAB40C-203ENST00000535977 IFNL3Q8IZI9 196 aa20.62■□□□□ 0.89
RAB40C-203ENST00000535977 CCAR2Q8N163 923 aaKnown RBP20.62■□□□□ 0.89
RAB40C-203ENST00000535977 WASF1Q92558 559 aa20.62■□□□□ 0.89
RAB40C-203ENST00000535977 KIAA1468Q9P260 1216 aa20.62■□□□□ 0.89
RAB40C-203ENST00000535977 CASQ1P31415 396 aa20.62■□□□□ 0.89
RAB40C-203ENST00000535977 STK36Q9NRP7 1315 aa20.62■□□□□ 0.89
RAB40C-203ENST00000535977 B4E1Z4 1266 aa20.62■□□□□ 0.89
RAB40C-203ENST00000535977 NDUFA8P51970 172 aa20.62■□□□□ 0.89
RAB40C-203ENST00000535977 TRIM29Q14134 588 aa20.62■□□□□ 0.89
RAB40C-203ENST00000535977 NFXL1Q6ZNB6 911 aa20.62■□□□□ 0.89
RAB40C-203ENST00000535977 PNPLA7Q6ZV29 1317 aa20.61■□□□□ 0.89
RAB40C-203ENST00000535977 PPP6R2O75170 966 aa20.61■□□□□ 0.89
RAB40C-203ENST00000535977 ZRANB2O95218 330 aaKnown RBP eCLIP20.61■□□□□ 0.892e-6■■■□□ 16.1
RAB40C-203ENST00000535977 TMEM67Q5HYA8 995 aa20.61■□□□□ 0.89
RAB40C-203ENST00000535977 MAGEB6Q8N7X4 407 aa20.61■□□□□ 0.89
RAB40C-203ENST00000535977 A0A1B0GVL5 298 aa20.61■□□□□ 0.89
RAB40C-203ENST00000535977 IARSP41252 1262 aaKnown RBP20.61■□□□□ 0.89
RAB40C-203ENST00000535977 CCZ1BP86790 482 aa20.61■□□□□ 0.89
RAB40C-203ENST00000535977 CCZ1P86791 482 aaPredicted RBP20.61■□□□□ 0.89
RAB40C-203ENST00000535977 RASGRF1Q13972 1273 aa20.61■□□□□ 0.89
RAB40C-203ENST00000535977 ZSCAN26Q16670 478 aa20.61■□□□□ 0.89
RAB40C-203ENST00000535977 ARHGAP29Q52LW3 1261 aa20.61■□□□□ 0.89
RAB40C-203ENST00000535977 TMTC2Q8N394 836 aa20.61■□□□□ 0.89
RAB40C-203ENST00000535977 LOC102724159A0A0B4J2E5 919 aa20.6■□□□□ 0.89
RAB40C-203ENST00000535977 CRKLP46109 303 aaKnown RBP20.6■□□□□ 0.89
RAB40C-203ENST00000535977 DHX8Q14562 1220 aaKnown RBP20.6■□□□□ 0.89
RAB40C-203ENST00000535977 PWP2Q15269 919 aaKnown RBP20.6■□□□□ 0.89
RAB40C-203ENST00000535977 DHX40Q8IX18 779 aaKnown RBP20.6■□□□□ 0.89
RAB40C-203ENST00000535977 HELBQ8NG08 1087 aaPredicted RBP20.6■□□□□ 0.89
RAB40C-203ENST00000535977 L2HGDHQ9H9P8 463 aa20.6■□□□□ 0.89
RAB40C-203ENST00000535977 LY9Q9HBG7 655 aa20.6■□□□□ 0.89
RAB40C-203ENST00000535977 DOCK2Q92608 1830 aa20.6■□□□□ 0.89
RAB40C-203ENST00000535977 AHDC1Q5TGY3 1603 aaPredicted RBP20.6■□□□□ 0.89
RAB40C-203ENST00000535977 CCDC69A6NI79 296 aa20.6■□□□□ 0.89
RAB40C-203ENST00000535977 SART3Q15020 963 aaKnown RBP20.6■□□□□ 0.89
RAB40C-203ENST00000535977 AKNAD1Q5T1N1 836 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 484.4 ms