RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 ERICH6Q7L0X2 663 aa11.87□□□□□ -0.51
SSBP3-215ENST00000533946 RAI14Q9P0K7 980 aa11.87□□□□□ -0.51
SSBP3-215ENST00000533946 DOCK2Q92608 1830 aa11.87□□□□□ -0.51
SSBP3-215ENST00000533946 MAST3O60307 1309 aa11.86□□□□□ -0.51
SSBP3-215ENST00000533946 PHIPQ8WWQ0 1821 aa11.86□□□□□ -0.51
SSBP3-215ENST00000533946 TESPA1A2RU30 521 aaPredicted RBP11.86□□□□□ -0.51
SSBP3-215ENST00000533946 TNNI2P48788 182 aa11.86□□□□□ -0.51
SSBP3-215ENST00000533946 TTC39AQ5SRH9 613 aa11.86□□□□□ -0.51
SSBP3-215ENST00000533946 FAM163AQ96GL9 167 aaPredicted RBP11.86□□□□□ -0.51
SSBP3-215ENST00000533946 GPR108Q9NPR9 543 aa11.86□□□□□ -0.51
SSBP3-215ENST00000533946 ZNF112Q9UJU3 913 aa11.86□□□□□ -0.51
SSBP3-215ENST00000533946 PDS5AQ29RF7 1337 aaKnown RBP11.86□□□□□ -0.51
SSBP3-215ENST00000533946 CCL15-CCL14A0A0B4J2E2 113 aa11.85□□□□□ -0.51
SSBP3-215ENST00000533946 MANSC4A6NHS7 340 aaPredicted RBP11.85□□□□□ -0.51
SSBP3-215ENST00000533946 SPDYE5A6NIY4 337 aa11.85□□□□□ -0.51
SSBP3-215ENST00000533946 ZBTB22O15209 634 aa11.85□□□□□ -0.51
SSBP3-215ENST00000533946 ZBTB48P10074 688 aaPredicted RBP11.85□□□□□ -0.51
SSBP3-215ENST00000533946 CTGFP29279 349 aa11.85□□□□□ -0.51
SSBP3-215ENST00000533946 CCL15Q16663 113 aa11.85□□□□□ -0.51
SSBP3-215ENST00000533946 AACSQ86V21 672 aa11.85□□□□□ -0.51
SSBP3-215ENST00000533946 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.85□□□□□ -0.51
SSBP3-215ENST00000533946 RHPN1Q8TCX5 695 aa11.85□□□□□ -0.51
SSBP3-215ENST00000533946 IDI2Q9BXS1 227 aa11.85□□□□□ -0.51
SSBP3-215ENST00000533946 ARHGAP39Q9C0H5 1083 aa11.85□□□□□ -0.51
SSBP3-215ENST00000533946 AATFQ9NY61 560 aaKnown RBP eCLIP11.85□□□□□ -0.51
SSBP3-215ENST00000533946 TMOD2Q9NZR1 351 aa11.85□□□□□ -0.51
SSBP3-215ENST00000533946 RPAP1Q9BWH6 1393 aaPredicted RBP11.84□□□□□ -0.51
SSBP3-215ENST00000533946 BTBD19C9JJ37 291 aa11.84□□□□□ -0.51
SSBP3-215ENST00000533946 SMIM22K7EJ46 135 aa11.84□□□□□ -0.51
SSBP3-215ENST00000533946 SOX10P56693 466 aa11.84□□□□□ -0.51
SSBP3-215ENST00000533946 SREBF2Q12772 1141 aa11.84□□□□□ -0.51
SSBP3-215ENST00000533946 MIGA1Q8NAN2 632 aa11.84□□□□□ -0.51
SSBP3-215ENST00000533946 CD99L2Q8TCZ2 262 aa11.84□□□□□ -0.51
SSBP3-215ENST00000533946 ZNF341Q9BYN7 854 aa11.84□□□□□ -0.51
SSBP3-215ENST00000533946 LRP2BPQ9P2M1 347 aa11.84□□□□□ -0.51
SSBP3-215ENST00000533946 UQCRFS1P1P0C7P4 283 aa11.83□□□□□ -0.52
SSBP3-215ENST00000533946 CTU1Q7Z7A3 348 aaKnown RBP11.83□□□□□ -0.52
SSBP3-215ENST00000533946 MAPKAPK5Q8IW41 473 aa11.83□□□□□ -0.52
SSBP3-215ENST00000533946 ZSCAN29Q8IWY8 852 aaPredicted RBP11.83□□□□□ -0.52
SSBP3-215ENST00000533946 DNAJC18Q9H819 358 aa11.83□□□□□ -0.52
SSBP3-215ENST00000533946 SAP30BPQ9UHR5 308 aaKnown RBP11.83□□□□□ -0.52
SSBP3-215ENST00000533946 CSADQ9Y600 493 aa11.83□□□□□ -0.52
SSBP3-215ENST00000533946 MAST2Q6P0Q8 1798 aa11.82□□□□□ -0.52
SSBP3-215ENST00000533946 PTPRFP10586 1907 aa11.82□□□□□ -0.52
SSBP3-215ENST00000533946 FOCADQ5VW36 1801 aa11.82□□□□□ -0.52
SSBP3-215ENST00000533946 PEX10O60683 326 aa11.82□□□□□ -0.52
SSBP3-215ENST00000533946 ENTPD3O75355 529 aa11.82□□□□□ -0.52
SSBP3-215ENST00000533946 MAP3K10Q02779 954 aa11.82□□□□□ -0.52
SSBP3-215ENST00000533946 TSHZ3Q63HK5 1081 aa11.82□□□□□ -0.52
SSBP3-215ENST00000533946 SPTY2D1Q68D10 685 aaPredicted RBP11.82□□□□□ -0.52
SSBP3-215ENST00000533946 NAA16Q6N069 864 aaPredicted RBP11.82□□□□□ -0.52
SSBP3-215ENST00000533946 GPAT2Q6NUI2 795 aa11.82□□□□□ -0.52
SSBP3-215ENST00000533946 ERO1BQ86YB8 467 aa11.82□□□□□ -0.52
SSBP3-215ENST00000533946 TEX11Q8IYF3 940 aa11.82□□□□□ -0.52
SSBP3-215ENST00000533946 CFHR5Q9BXR6 569 aa11.82□□□□□ -0.52
SSBP3-215ENST00000533946 HPS5Q9UPZ3 1129 aa11.82□□□□□ -0.52
SSBP3-215ENST00000533946 PCDHB15Q9Y5E8 787 aa11.82□□□□□ -0.52
SSBP3-215ENST00000533946 ATAD5Q96QE3 1844 aa11.81□□□□□ -0.52
SSBP3-215ENST00000533946 FKTNO75072 461 aa11.81□□□□□ -0.52
SSBP3-215ENST00000533946 IDH1O75874 414 aaKnown RBP11.81□□□□□ -0.52
SSBP3-215ENST00000533946 CYP7A1P22680 504 aa11.81□□□□□ -0.52
SSBP3-215ENST00000533946 PPIL2Q13356 520 aa11.81□□□□□ -0.52
SSBP3-215ENST00000533946 CCDC158Q5M9N0 1113 aa11.81□□□□□ -0.52
SSBP3-215ENST00000533946 REM2Q8IYK8 340 aaPredicted RBP11.81□□□□□ -0.52
SSBP3-215ENST00000533946 ZGPATQ8N5A5 531 aaKnown RBP11.81□□□□□ -0.52
SSBP3-215ENST00000533946 MAGEB6Q8N7X4 407 aa11.81□□□□□ -0.52
SSBP3-215ENST00000533946 TGFBRAP1Q8WUH2 860 aa11.81□□□□□ -0.52
SSBP3-215ENST00000533946 ZNF512BQ96KM6 892 aaPredicted RBP11.81□□□□□ -0.52
SSBP3-215ENST00000533946 OSBPL5Q9H0X9 879 aaPredicted RBP11.81□□□□□ -0.52
SSBP3-215ENST00000533946 PALD1Q9ULE6 856 aa11.81□□□□□ -0.52
SSBP3-215ENST00000533946 DDX19BQ9UMR2 479 aa11.81□□□□□ -0.52
SSBP3-215ENST00000533946 DOCK1Q14185 1865 aa11.8□□□□□ -0.52
SSBP3-215ENST00000533946 UNCXA6NJT0 531 aa11.8□□□□□ -0.52
SSBP3-215ENST00000533946 CYP2C8P10632 490 aa11.8□□□□□ -0.52
SSBP3-215ENST00000533946 PTPRAP18433 802 aa11.8□□□□□ -0.52
SSBP3-215ENST00000533946 GTF2A2P52657 109 aa11.8□□□□□ -0.52
SSBP3-215ENST00000533946 OTOP1Q7RTM1 612 aa11.8□□□□□ -0.52
SSBP3-215ENST00000533946 OTUD7AQ8TE49 926 aaPredicted RBP11.8□□□□□ -0.52
SSBP3-215ENST00000533946 ZHX2Q9Y6X8 837 aa11.8□□□□□ -0.52
SSBP3-215ENST00000533946 PPP4CP60510 307 aa11.79□□□□□ -0.52
SSBP3-215ENST00000533946 TAF1CQ15572 869 aaPredicted RBP11.79□□□□□ -0.52
SSBP3-215ENST00000533946 NOL9Q5SY16 702 aaKnown RBP11.79□□□□□ -0.52
SSBP3-215ENST00000533946 DCAF15Q66K64 600 aa11.79□□□□□ -0.52
SSBP3-215ENST00000533946 RPAP2Q8IXW5 612 aaPredicted RBP11.79□□□□□ -0.52
SSBP3-215ENST00000533946 DNAJC2Q99543 621 aaKnown RBP11.79□□□□□ -0.52
SSBP3-215ENST00000533946 CPA4Q9UI42 421 aa11.79□□□□□ -0.52
SSBP3-215ENST00000533946 KCNH4Q9UQ05 1017 aa11.79□□□□□ -0.52
SSBP3-215ENST00000533946 AFG3L2Q9Y4W6 797 aa11.79□□□□□ -0.52
SSBP3-215ENST00000533946 TRIM17Q9Y577 477 aa11.79□□□□□ -0.52
SSBP3-215ENST00000533946 FLT1P17948 1338 aa11.79□□□□□ -0.52
SSBP3-215ENST00000533946 ADGRA2Q96PE1 1338 aa11.79□□□□□ -0.52
SSBP3-215ENST00000533946 MYH1P12882 1939 aa11.78□□□□□ -0.52
SSBP3-215ENST00000533946 TCRBV5S4A2TA0A5A2 114 aa11.78□□□□□ -0.52
SSBP3-215ENST00000533946 TRIM75PA6NK02 468 aa11.78□□□□□ -0.52
SSBP3-215ENST00000533946 GOLIM4O00461 696 aa11.78□□□□□ -0.52
SSBP3-215ENST00000533946 INHBEP58166 350 aa11.78□□□□□ -0.52
SSBP3-215ENST00000533946 PPATQ06203 517 aa11.78□□□□□ -0.52
SSBP3-215ENST00000533946 PDE3AQ14432 1141 aa11.78□□□□□ -0.52
SSBP3-215ENST00000533946 TREML2Q5T2D2 321 aa11.78□□□□□ -0.52
SSBP3-215ENST00000533946 SCYL3Q8IZE3 742 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms