RNA–Protein interactions for RNA: ENST00000532575.1

CDC27-208, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-208ENST00000532575 FAM196BA6NMK8 535 aa10.94□□□□□ -0.66
CDC27-208ENST00000532575 USP17L15C9J2P7 530 aa10.94□□□□□ -0.66
CDC27-208ENST00000532575 USP17L10C9JJH3 530 aa10.94□□□□□ -0.66
CDC27-208ENST00000532575 USP17L13C9JLJ4 530 aa10.94□□□□□ -0.66
CDC27-208ENST00000532575 USP17L12C9JPN9 530 aa10.94□□□□□ -0.66
CDC27-208ENST00000532575 USP17L11C9JVI0 530 aa10.94□□□□□ -0.66
CDC27-208ENST00000532575 USP17L21D6R901 530 aa10.94□□□□□ -0.66
CDC27-208ENST00000532575 USP17L18D6R9N7 530 aa10.94□□□□□ -0.66
CDC27-208ENST00000532575 USP17L22D6RA61 530 aa10.94□□□□□ -0.66
CDC27-208ENST00000532575 USP17L17D6RBQ6 530 aa10.94□□□□□ -0.66
CDC27-208ENST00000532575 USP17L19D6RCP7 530 aa10.94□□□□□ -0.66
CDC27-208ENST00000532575 USP17L20D6RJB6 530 aa10.94□□□□□ -0.66
CDC27-208ENST00000532575 HTATSF1O43719 755 aaKnown RBP10.94□□□□□ -0.66
CDC27-208ENST00000532575 PIP4K2AP48426 406 aaPredicted RBP10.94□□□□□ -0.66
CDC27-208ENST00000532575 USP17L24Q0WX57 530 aa10.94□□□□□ -0.66
CDC27-208ENST00000532575 MAP1SQ66K74 1059 aaPredicted RBP10.94□□□□□ -0.66
CDC27-208ENST00000532575 PHACTR3Q96KR7 559 aa10.94□□□□□ -0.66
CDC27-208ENST00000532575 GRIP2Q9C0E4 1043 aa10.94□□□□□ -0.66
CDC27-208ENST00000532575 ABT1Q9ULW3 272 aaKnown RBP10.94□□□□□ -0.66
CDC27-208ENST00000532575 COL11A2P13942 1736 aaPredicted RBP10.94□□□□□ -0.66
CDC27-208ENST00000532575 RNF123Q5XPI4 1314 aa10.93□□□□□ -0.66
CDC27-208ENST00000532575 FAM177BA6PVY3 158 aa10.93□□□□□ -0.66
CDC27-208ENST00000532575 ECE1P42892 770 aa10.93□□□□□ -0.66
CDC27-208ENST00000532575 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.93□□□□□ -0.66
CDC27-208ENST00000532575 ARID3AQ99856 593 aa10.93□□□□□ -0.66
CDC27-208ENST00000532575 COL3A1P02461 1466 aaPredicted RBP10.93□□□□□ -0.66
CDC27-208ENST00000532575 PRAMEF22A3QJZ6 481 aa10.92□□□□□ -0.66
CDC27-208ENST00000532575 ERVV-1B6SEH8 477 aa10.92□□□□□ -0.66
CDC27-208ENST00000532575 HSPA8P11142 646 aaKnown RBP10.92□□□□□ -0.66
CDC27-208ENST00000532575 CNGB1Q14028 1251 aaPredicted RBP10.92□□□□□ -0.66
CDC27-208ENST00000532575 TLR1Q15399 786 aa10.92□□□□□ -0.66
CDC27-208ENST00000532575 CRY2Q49AN0 593 aa10.92□□□□□ -0.66
CDC27-208ENST00000532575 NBPF10Q6P3W6 841 aaKnown RBP10.92□□□□□ -0.66
CDC27-208ENST00000532575 LYSMD3Q7Z3D4 306 aa10.92□□□□□ -0.66
CDC27-208ENST00000532575 PRICKLE2Q7Z3G6 844 aa10.92□□□□□ -0.66
CDC27-208ENST00000532575 NBPF15Q8N660 670 aa10.92□□□□□ -0.66
CDC27-208ENST00000532575 PBXIP1Q96AQ6 731 aa10.92□□□□□ -0.66
CDC27-208ENST00000532575 ABHD8Q96I13 439 aa10.92□□□□□ -0.66
CDC27-208ENST00000532575 TMX4Q9H1E5 349 aaPredicted RBP10.92□□□□□ -0.66
CDC27-208ENST00000532575 DDX21Q9NR30 783 aaKnown RBP eCLIP10.92□□□□□ -0.66
CDC27-208ENST00000532575 GJA3Q9Y6H8 435 aa10.92□□□□□ -0.66
CDC27-208ENST00000532575 VIRMAQ69YN4 1812 aaKnown RBP10.91□□□□□ -0.66
CDC27-208ENST00000532575 SFI1A8K8P3 1242 aa10.91□□□□□ -0.66
CDC27-208ENST00000532575 U2AF1L5P0DN76 240 aaPredicted RBP10.91□□□□□ -0.66
CDC27-208ENST00000532575 SMTNP53814 917 aa10.91□□□□□ -0.66
CDC27-208ENST00000532575 U2AF1Q01081 240 aaKnown RBP eCLIP10.91□□□□□ -0.66
CDC27-208ENST00000532575 TAF7Q15545 349 aaPredicted RBP10.91□□□□□ -0.66
CDC27-208ENST00000532575 HLFQ16534 295 aa10.91□□□□□ -0.66
CDC27-208ENST00000532575 OLFM4Q6UX06 510 aa10.91□□□□□ -0.66
CDC27-208ENST00000532575 MCM10Q7L590 875 aa10.91□□□□□ -0.66
CDC27-208ENST00000532575 RPGRQ92834 1020 aaKnown RBP10.91□□□□□ -0.66
CDC27-208ENST00000532575 ZSCAN10Q96SZ4 725 aaPredicted RBP10.91□□□□□ -0.66
CDC27-208ENST00000532575 ARFGEF2Q9Y6D5 1785 aa10.9□□□□□ -0.66
CDC27-208ENST00000532575 BACH1O14867 736 aa10.9□□□□□ -0.66
CDC27-208ENST00000532575 NEFMP07197 916 aa10.9□□□□□ -0.66
CDC27-208ENST00000532575 HOXA10P31260 410 aaPredicted RBP10.9□□□□□ -0.66
CDC27-208ENST00000532575 DPYDQ12882 1025 aa10.9□□□□□ -0.66
CDC27-208ENST00000532575 USP50Q70EL3 339 aaPredicted RBP10.9□□□□□ -0.66
CDC27-208ENST00000532575 ANKMY2Q8IV38 441 aa10.9□□□□□ -0.66
CDC27-208ENST00000532575 PNISRQ8TF01 805 aaKnown RBP10.9□□□□□ -0.66
CDC27-208ENST00000532575 RBM17Q96I25 401 aaKnown RBP10.9□□□□□ -0.66
CDC27-208ENST00000532575 CAPNS2Q96L46 248 aa10.9□□□□□ -0.66
CDC27-208ENST00000532575 GPR101Q96P66 508 aaPredicted RBP10.9□□□□□ -0.66
CDC27-208ENST00000532575 VPS33BQ9H267 617 aa10.9□□□□□ -0.66
CDC27-208ENST00000532575 KIF6Q6ZMV9 814 aa10.89□□□□□ -0.67
CDC27-208ENST00000532575 CRAMP1Q96RY5 1269 aa10.89□□□□□ -0.67
CDC27-208ENST00000532575 SIPA1L3O60292 1781 aaPredicted RBP10.89□□□□□ -0.67
CDC27-208ENST00000532575 MAP3K15Q6ZN16 1313 aa10.88□□□□□ -0.67
CDC27-208ENST00000532575 BCORQ6W2J9 1755 aa10.88□□□□□ -0.67
CDC27-208ENST00000532575 A6NJY4 79 aa10.88□□□□□ -0.67
CDC27-208ENST00000532575 SPATA31C2B4DYI2 1134 aa10.88□□□□□ -0.67
CDC27-208ENST00000532575 CA12O43570 354 aa10.88□□□□□ -0.67
CDC27-208ENST00000532575 RHOQP17081 205 aa10.88□□□□□ -0.67
CDC27-208ENST00000532575 MAP2K2P36507 400 aa10.88□□□□□ -0.67
CDC27-208ENST00000532575 EPS15P42566 896 aa10.88□□□□□ -0.67
CDC27-208ENST00000532575 SEC13P55735 322 aa10.88□□□□□ -0.67
CDC27-208ENST00000532575 POU4F2Q12837 409 aa10.88□□□□□ -0.67
CDC27-208ENST00000532575 MTFR1Q15390 333 aa10.88□□□□□ -0.67
CDC27-208ENST00000532575 NIM1KQ8IY84 436 aa10.88□□□□□ -0.67
CDC27-208ENST00000532575 NGEFQ8N5V2 710 aa10.88□□□□□ -0.67
CDC27-208ENST00000532575 RBM19Q9Y4C8 960 aaKnown RBP10.88□□□□□ -0.67
CDC27-208ENST00000532575 CCDC85CA6NKD9 419 aa10.87□□□□□ -0.67
CDC27-208ENST00000532575 M0R2N6 131 aa10.87□□□□□ -0.67
CDC27-208ENST00000532575 ATG7O95352 703 aa10.87□□□□□ -0.67
CDC27-208ENST00000532575 EPHA4P54764 986 aa10.87□□□□□ -0.67
CDC27-208ENST00000532575 PTSQ03393 145 aa10.87□□□□□ -0.67
CDC27-208ENST00000532575 DCTN1Q14203 1278 aa10.87□□□□□ -0.67
CDC27-208ENST00000532575 TMEM214Q6NUQ4 689 aaKnown RBP10.87□□□□□ -0.67
CDC27-208ENST00000532575 PPP1R42Q7Z4L9 355 aa10.87□□□□□ -0.67
CDC27-208ENST00000532575 SUPT20HQ8NEM7 779 aa10.87□□□□□ -0.67
CDC27-208ENST00000532575 ADARB2Q9NS39 739 aaKnown RBP10.87□□□□□ -0.67
CDC27-208ENST00000532575 NOVA2Q9UNW9 492 aaKnown RBP10.87□□□□□ -0.67
CDC27-208ENST00000532575 RRP7AQ9Y3A4 280 aaKnown RBP10.87□□□□□ -0.67
CDC27-208ENST00000532575 ADAMTSL1Q8N6G6 1762 aa10.87□□□□□ -0.67
CDC27-208ENST00000532575 IBTKQ9P2D0 1353 aaPredicted RBP10.87□□□□□ -0.67
CDC27-208ENST00000532575 MLLT1Q03111 559 aaPredicted RBP10.86□□□□□ -0.67
CDC27-208ENST00000532575 GRM1Q13255 1194 aa10.86□□□□□ -0.67
CDC27-208ENST00000532575 PARP10Q53GL7 1025 aa10.86□□□□□ -0.67
CDC27-208ENST00000532575 CST9Q5W186 159 aa10.86□□□□□ -0.67
CDC27-208ENST00000532575 CYP4F22Q6NT55 531 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms