RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 LONRF3Q496Y0 759 aa22.45■■□□□ 1.18
PCF11-203ENST00000530304 LPIN2Q92539 896 aa22.45■■□□□ 1.18
PCF11-203ENST00000530304 SLC26A6Q9BXS9 759 aa22.45■■□□□ 1.18
PCF11-203ENST00000530304 EPB41L4AQ9HCS5 686 aaPredicted RBP22.45■■□□□ 1.18
PCF11-203ENST00000530304 SLC12A7Q9Y666 1083 aa22.45■■□□□ 1.18
PCF11-203ENST00000530304 MYL5Q02045 173 aa22.44■■□□□ 1.18
PCF11-203ENST00000530304 SLC4A9Q96Q91 983 aa22.44■■□□□ 1.18
PCF11-203ENST00000530304 ECM29Q5VYK3 1845 aa22.44■■□□□ 1.18
PCF11-203ENST00000530304 IFIT3O14879 490 aaKnown RBP22.44■■□□□ 1.18
PCF11-203ENST00000530304 NRDCO43847 1150 aa22.44■■□□□ 1.18
PCF11-203ENST00000530304 CUTAO60888 179 aa22.44■■□□□ 1.18
PCF11-203ENST00000530304 SLU7O95391 586 aaKnown RBP22.44■■□□□ 1.18
PCF11-203ENST00000530304 SSRP1Q08945 709 aaKnown RBP22.44■■□□□ 1.18
PCF11-203ENST00000530304 METTL16Q86W50 562 aaKnown RBP22.44■■□□□ 1.18
PCF11-203ENST00000530304 SPATA5Q8NB90 893 aa22.44■■□□□ 1.18
PCF11-203ENST00000530304 NAPBQ9H115 298 aa22.44■■□□□ 1.18
PCF11-203ENST00000530304 FGFR2P21802 821 aa22.44■■□□□ 1.18
PCF11-203ENST00000530304 UBASH3AP57075 661 aa22.44■■□□□ 1.18
PCF11-203ENST00000530304 MAGEB6Q8N7X4 407 aa22.44■■□□□ 1.18
PCF11-203ENST00000530304 DPF2Q92785 391 aa22.44■■□□□ 1.18
PCF11-203ENST00000530304 GTPBP4Q9BZE4 634 aaKnown RBP22.44■■□□□ 1.18
PCF11-203ENST00000530304 SLAIN2Q9P270 581 aa22.44■■□□□ 1.18
PCF11-203ENST00000530304 DDX41Q9UJV9 622 aaKnown RBP22.44■■□□□ 1.18
PCF11-203ENST00000530304 ZBTB1Q9Y2K1 713 aa22.44■■□□□ 1.18
PCF11-203ENST00000530304 SERPINC1P01008 464 aa22.43■■□□□ 1.18
PCF11-203ENST00000530304 FOXP4Q8IVH2 680 aaPredicted RBP22.43■■□□□ 1.18
PCF11-203ENST00000530304 SYTL4Q96C24 671 aaPredicted RBP22.43■■□□□ 1.18
PCF11-203ENST00000530304 KCNH3Q9ULD8 1083 aa22.43■■□□□ 1.18
PCF11-203ENST00000530304 TACC3Q9Y6A5 838 aa22.43■■□□□ 1.18
PCF11-203ENST00000530304 MBD4O95243 580 aa22.43■■□□□ 1.18
PCF11-203ENST00000530304 KRBA2Q6ZNG9 492 aa22.43■■□□□ 1.18
PCF11-203ENST00000530304 CNNM3Q8NE01 707 aa22.43■■□□□ 1.18
PCF11-203ENST00000530304 SYT10Q6XYQ8 523 aa22.42■■□□□ 1.18
PCF11-203ENST00000530304 MROH5Q6ZUA9 1318 aa22.42■■□□□ 1.18
PCF11-203ENST00000530304 STK36Q9NRP7 1315 aa22.42■■□□□ 1.18
PCF11-203ENST00000530304 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.42■■□□□ 1.18
PCF11-203ENST00000530304 FMNL1O95466 1100 aaPredicted RBP22.42■■□□□ 1.18
PCF11-203ENST00000530304 MAP3K12Q12852 859 aa22.42■■□□□ 1.18
PCF11-203ENST00000530304 KMT5BQ4FZB7 885 aa22.42■■□□□ 1.18
PCF11-203ENST00000530304 OLFM4Q6UX06 510 aa22.42■■□□□ 1.18
PCF11-203ENST00000530304 ZNF397Q8NF99 534 aaPredicted RBP22.42■■□□□ 1.18
PCF11-203ENST00000530304 ARMT1Q9H993 441 aa22.42■■□□□ 1.18
PCF11-203ENST00000530304 ANKRD36CQ5JPF3 1778 aa22.41■■□□□ 1.18
PCF11-203ENST00000530304 CBFA2T2O43439 604 aa22.41■■□□□ 1.18
PCF11-203ENST00000530304 ELF2Q15723 593 aa22.41■■□□□ 1.18
PCF11-203ENST00000530304 NOSTRINQ8IVI9 506 aa22.41■■□□□ 1.18
PCF11-203ENST00000530304 PCDHA5Q9Y5H7 936 aa22.41■■□□□ 1.18
PCF11-203ENST00000530304 ABCA3Q99758 1704 aa22.41■■□□□ 1.18
PCF11-203ENST00000530304 GUCY1A2P33402 732 aa22.41■■□□□ 1.18
PCF11-203ENST00000530304 HSPA2P54652 639 aa22.41■■□□□ 1.18
PCF11-203ENST00000530304 RASGRF1Q13972 1273 aa22.41■■□□□ 1.18
PCF11-203ENST00000530304 CFAP100Q494V2 611 aa22.41■■□□□ 1.18
PCF11-203ENST00000530304 KRI1Q8N9T8 703 aaKnown RBP22.41■■□□□ 1.18
PCF11-203ENST00000530304 L2HGDHQ9H9P8 463 aa22.41■■□□□ 1.18
PCF11-203ENST00000530304 LRP6O75581 1613 aa22.4■■□□□ 1.18
PCF11-203ENST00000530304 ITGB4P16144 1822 aa22.4■■□□□ 1.18
PCF11-203ENST00000530304 BTBD18B2RXH4 712 aa22.4■■□□□ 1.18
PCF11-203ENST00000530304 SNAP23O00161 211 aa22.4■■□□□ 1.18
PCF11-203ENST00000530304 IFNAR1P17181 557 aa22.4■■□□□ 1.18
PCF11-203ENST00000530304 SPECC1Q5M775 1068 aa22.4■■□□□ 1.18
PCF11-203ENST00000530304 AKNAD1Q5T1N1 836 aa22.4■■□□□ 1.18
PCF11-203ENST00000530304 CNNM2Q9H8M5 875 aa22.4■■□□□ 1.18
PCF11-203ENST00000530304 FANCLQ9NW38 375 aa22.4■■□□□ 1.18
PCF11-203ENST00000530304 GSG1L2A8MUP6 293 aa22.4■■□□□ 1.18
PCF11-203ENST00000530304 WASF1Q92558 559 aa22.4■■□□□ 1.18
PCF11-203ENST00000530304 KRT23Q9C075 422 aa22.4■■□□□ 1.18
PCF11-203ENST00000530304 NUP98P52948 1817 aa22.39■■□□□ 1.18
PCF11-203ENST00000530304 MMP1P03956 469 aa22.39■■□□□ 1.18
PCF11-203ENST00000530304 MFSD6Q6ZSS7 791 aa22.39■■□□□ 1.18
PCF11-203ENST00000530304 DZIP3Q86Y13 1208 aaKnown RBP22.39■■□□□ 1.18
PCF11-203ENST00000530304 STK11IPQ8N1F8 1099 aa22.39■■□□□ 1.18
PCF11-203ENST00000530304 FOXN1O15353 648 aa22.39■■□□□ 1.17
PCF11-203ENST00000530304 SLC5A1P13866 664 aa22.39■■□□□ 1.17
PCF11-203ENST00000530304 BMP6P22004 513 aa22.39■■□□□ 1.17
PCF11-203ENST00000530304 TOB1P50616 345 aaPredicted RBP22.39■■□□□ 1.17
PCF11-203ENST00000530304 MORC2Q9Y6X9 1032 aaPredicted RBP22.39■■□□□ 1.17
PCF11-203ENST00000530304 ERVV-1B6SEH8 477 aa22.38■■□□□ 1.17
PCF11-203ENST00000530304 PRKAB2O43741 272 aa22.38■■□□□ 1.17
PCF11-203ENST00000530304 MDM2Q00987 491 aaPredicted RBP22.38■■□□□ 1.17
PCF11-203ENST00000530304 ZKSCAN3Q9BRR0 538 aa22.38■■□□□ 1.17
PCF11-203ENST00000530304 KCNJ14Q9UNX9 436 aa22.38■■□□□ 1.17
PCF11-203ENST00000530304 TUBB4AP04350 444 aa22.38■■□□□ 1.17
PCF11-203ENST00000530304 PDE4BQ07343 736 aa22.38■■□□□ 1.17
PCF11-203ENST00000530304 CCDC93Q567U6 631 aa22.38■■□□□ 1.17
PCF11-203ENST00000530304 RRP12Q5JTH9 1297 aaKnown RBP22.38■■□□□ 1.17
PCF11-203ENST00000530304 FBXO38Q6PIJ6 1188 aa22.38■■□□□ 1.17
PCF11-203ENST00000530304 VSTM4Q8IW00 320 aa22.38■■□□□ 1.17
PCF11-203ENST00000530304 DIS3L2Q8IYB7 885 aaKnown RBP22.38■■□□□ 1.17
PCF11-203ENST00000530304 ZNF34Q8IZ26 560 aa22.38■■□□□ 1.17
PCF11-203ENST00000530304 TMX1Q9H3N1 280 aa22.38■■□□□ 1.17
PCF11-203ENST00000530304 CHD4Q14839 1912 aa22.37■■□□□ 1.17
PCF11-203ENST00000530304 SAFBQ15424 915 aaKnown RBP eCLIP22.37■■□□□ 1.17
PCF11-203ENST00000530304 HOMER1Q86YM7 354 aa22.37■■□□□ 1.17
PCF11-203ENST00000530304 ZHX1Q9UKY1 873 aaPredicted RBP22.37■■□□□ 1.17
PCF11-203ENST00000530304 BCL9O00512 1426 aa22.37■■□□□ 1.17
PCF11-203ENST00000530304 TMEM232C9JQI7 657 aa22.37■■□□□ 1.17
PCF11-203ENST00000530304 ELOA2Q8IYF1 753 aaPredicted RBP22.37■■□□□ 1.17
PCF11-203ENST00000530304 MYO1BO43795 1136 aa22.36■■□□□ 1.17
PCF11-203ENST00000530304 GRIN1Q05586 938 aa22.36■■□□□ 1.17
PCF11-203ENST00000530304 RTN1Q16799 776 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms