RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-213ENST00000528999 SAFBQ15424 915 aaKnown RBP eCLIP12.41□□□□□ -0.42
PUF60-213ENST00000528999 KRT40Q6A162 431 aa12.41□□□□□ -0.42
PUF60-213ENST00000528999 CERS3Q8IU89 383 aa12.41□□□□□ -0.42
PUF60-213ENST00000528999 CKAP2LQ8IYA6 745 aa12.41□□□□□ -0.42
PUF60-213ENST00000528999 C8orf37Q96NL8 207 aa12.41□□□□□ -0.42
PUF60-213ENST00000528999 BPIFA3Q9BQP9 254 aa12.41□□□□□ -0.42
PUF60-213ENST00000528999 RIOK1Q9BRS2 568 aaKnown RBP12.41□□□□□ -0.42
PUF60-213ENST00000528999 BCL11BQ9C0K0 894 aaPredicted RBP12.41□□□□□ -0.42
PUF60-213ENST00000528999 FOXP1Q9H334 677 aaPredicted RBP12.41□□□□□ -0.42
PUF60-213ENST00000528999 ATP8A2Q9NTI2 1148 aa12.41□□□□□ -0.42
PUF60-213ENST00000528999 USP21Q9UK80 565 aa12.41□□□□□ -0.42
PUF60-213ENST00000528999 LEMD3Q9Y2U8 911 aa12.41□□□□□ -0.42
PUF60-213ENST00000528999 DEXIO95424 95 aa12.4□□□□□ -0.42
PUF60-213ENST00000528999 SLC3A2P08195 630 aaKnown RBP12.4□□□□□ -0.42
PUF60-213ENST00000528999 CDC27P30260 824 aa12.4□□□□□ -0.42
PUF60-213ENST00000528999 GYG1P46976 350 aa12.4□□□□□ -0.42
PUF60-213ENST00000528999 GUCY1B3Q02153 619 aa12.4□□□□□ -0.42
PUF60-213ENST00000528999 CEBPZQ03701 1054 aaKnown RBP12.4□□□□□ -0.42
PUF60-213ENST00000528999 CTDSPL2Q05D32 466 aa12.4□□□□□ -0.42
PUF60-213ENST00000528999 RTN1Q16799 776 aa12.4□□□□□ -0.42
PUF60-213ENST00000528999 SBK1Q52WX2 424 aa12.4□□□□□ -0.42
PUF60-213ENST00000528999 C15orf52Q6ZUT6 534 aaKnown RBP12.4□□□□□ -0.42
PUF60-213ENST00000528999 FANCBQ8NB91 859 aa12.4□□□□□ -0.42
PUF60-213ENST00000528999 UBAC1Q9BSL1 405 aa12.4□□□□□ -0.42
PUF60-213ENST00000528999 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.4□□□□□ -0.42
PUF60-213ENST00000528999 CCNL1Q9UK58 526 aaPredicted RBP12.4□□□□□ -0.42
PUF60-213ENST00000528999 CLIC4Q9Y696 253 aa12.4□□□□□ -0.42
PUF60-213ENST00000528999 SCN7AQ01118 1682 aa12.4□□□□□ -0.42
PUF60-213ENST00000528999 MYH15Q9Y2K3 1946 aa12.4□□□□□ -0.42
PUF60-213ENST00000528999 GOLGA6L19H0YKK7 550 aa12.39□□□□□ -0.43
PUF60-213ENST00000528999 SNAP23O00161 211 aa12.39□□□□□ -0.43
PUF60-213ENST00000528999 PRKAB2O43741 272 aa12.39□□□□□ -0.43
PUF60-213ENST00000528999 ORC4O43929 436 aa12.39□□□□□ -0.43
PUF60-213ENST00000528999 CUTAO60888 179 aa12.39□□□□□ -0.43
PUF60-213ENST00000528999 XBP1P17861 261 aa12.39□□□□□ -0.43
PUF60-213ENST00000528999 TM4SF1P30408 202 aa12.39□□□□□ -0.43
PUF60-213ENST00000528999 IQCB1Q15051 598 aa12.39□□□□□ -0.43
PUF60-213ENST00000528999 CCDC178Q5BJE1 867 aa12.39□□□□□ -0.43
PUF60-213ENST00000528999 AXDND1Q5T1B0 1012 aaPredicted RBP12.39□□□□□ -0.43
PUF60-213ENST00000528999 TRAPPC3LQ5T215 181 aa12.39□□□□□ -0.43
PUF60-213ENST00000528999 CRACR2BQ8N4Y2 399 aaPredicted RBP12.39□□□□□ -0.43
PUF60-213ENST00000528999 PIBF1Q8WXW3 757 aa12.39□□□□□ -0.43
PUF60-213ENST00000528999 CELF1Q92879 486 aaKnown RBP12.39□□□□□ -0.43
PUF60-213ENST00000528999 SDF4Q9BRK5 362 aa12.39□□□□□ -0.43
PUF60-213ENST00000528999 GOLPH3LQ9H4A5 285 aa12.39□□□□□ -0.43
PUF60-213ENST00000528999 RBM28Q9NW13 759 aaKnown RBP12.39□□□□□ -0.43
PUF60-213ENST00000528999 ABCF2Q9UG63 623 aa12.39□□□□□ -0.43
PUF60-213ENST00000528999 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.39□□□□□ -0.43
PUF60-213ENST00000528999 C4AP0C0L4 1744 aa12.38□□□□□ -0.43
PUF60-213ENST00000528999 C4BP0C0L5 1744 aa12.38□□□□□ -0.43
PUF60-213ENST00000528999 GNPATO15228 680 aa12.38□□□□□ -0.43
PUF60-213ENST00000528999 NEMFO60524 1076 aa12.38□□□□□ -0.43
PUF60-213ENST00000528999 POLR3DP05423 398 aaPredicted RBP12.38□□□□□ -0.43
PUF60-213ENST00000528999 GNL2Q13823 731 aaKnown RBP12.38□□□□□ -0.43
PUF60-213ENST00000528999 SEC23AQ15436 765 aa12.38□□□□□ -0.43
PUF60-213ENST00000528999 ZRSR1Q15695 479 aaKnown RBP12.38□□□□□ -0.43
PUF60-213ENST00000528999 TPRNQ4KMQ1 711 aa12.38□□□□□ -0.43
PUF60-213ENST00000528999 RILPL1Q5EBL4 403 aa12.38□□□□□ -0.43
PUF60-213ENST00000528999 C3orf67Q6ZVT6 689 aa12.38□□□□□ -0.43
PUF60-213ENST00000528999 MICU3Q86XE3 530 aa12.38□□□□□ -0.43
PUF60-213ENST00000528999 IQCA1Q86XH1 822 aa12.38□□□□□ -0.43
PUF60-213ENST00000528999 PLA2G4DQ86XP0 818 aa12.38□□□□□ -0.43
PUF60-213ENST00000528999 CEP57L1Q8IYX8 460 aa12.38□□□□□ -0.43
PUF60-213ENST00000528999 WDR66Q8TBY9 1149 aa12.38□□□□□ -0.43
PUF60-213ENST00000528999 ARHGEF1Q92888 912 aaKnown RBP12.38□□□□□ -0.43
PUF60-213ENST00000528999 NSUN4Q96CB9 384 aaKnown RBP12.38□□□□□ -0.43
PUF60-213ENST00000528999 MRFAP1L1Q96HT8 127 aa12.38□□□□□ -0.43
PUF60-213ENST00000528999 NAP1L5Q96NT1 182 aaPredicted RBP12.38□□□□□ -0.43
PUF60-213ENST00000528999 RNF26Q9BY78 433 aaPredicted RBP12.38□□□□□ -0.43
PUF60-213ENST00000528999 CRNKL1Q9BZJ0 848 aaKnown RBP12.38□□□□□ -0.43
PUF60-213ENST00000528999 SPTLC3Q9NUV7 552 aa12.38□□□□□ -0.43
PUF60-213ENST00000528999 KIAA1468Q9P260 1216 aa12.38□□□□□ -0.43
PUF60-213ENST00000528999 CEP131Q9UPN4 1083 aa12.38□□□□□ -0.43
PUF60-213ENST00000528999 NHSQ6T4R5 1651 aa12.38□□□□□ -0.43
PUF60-213ENST00000528999 THSD7AQ9UPZ6 1657 aa12.38□□□□□ -0.43
PUF60-213ENST00000528999 COL24A1Q17RW2 1714 aa12.37□□□□□ -0.43
PUF60-213ENST00000528999 MYO1BO43795 1136 aa12.37□□□□□ -0.43
PUF60-213ENST00000528999 DDAH1O94760 285 aa12.37□□□□□ -0.43
PUF60-213ENST00000528999 MMP1P03956 469 aa12.37□□□□□ -0.43
PUF60-213ENST00000528999 RFC4P35249 363 aa12.37□□□□□ -0.43
PUF60-213ENST00000528999 ZNF75DP51815 510 aa12.37□□□□□ -0.43
PUF60-213ENST00000528999 FOSBP53539 338 aa12.37□□□□□ -0.43
PUF60-213ENST00000528999 GSTO1P78417 241 aa12.37□□□□□ -0.43
PUF60-213ENST00000528999 PTPAQ15257 358 aa12.37□□□□□ -0.43
PUF60-213ENST00000528999 OTUD7BQ6GQQ9 843 aa12.37□□□□□ -0.43
PUF60-213ENST00000528999 NBPF11Q86T75 865 aa12.37□□□□□ -0.43
PUF60-213ENST00000528999 LUZP1Q86V48 1076 aa12.37□□□□□ -0.43
PUF60-213ENST00000528999 ZNF654Q8IZM8 581 aa12.37□□□□□ -0.43
PUF60-213ENST00000528999 FAM177A1Q8N128 213 aaPredicted RBP12.37□□□□□ -0.43
PUF60-213ENST00000528999 ZNF579Q8NAF0 562 aaKnown RBP12.37□□□□□ -0.43
PUF60-213ENST00000528999 GJD4Q96KN9 370 aaPredicted RBP12.37□□□□□ -0.43
PUF60-213ENST00000528999 ZSCAN10Q96SZ4 725 aaPredicted RBP12.37□□□□□ -0.43
PUF60-213ENST00000528999 MAP3K14Q99558 947 aa12.37□□□□□ -0.43
PUF60-213ENST00000528999 SLC26A6Q9BXS9 759 aa12.37□□□□□ -0.43
PUF60-213ENST00000528999 HOOK1Q9UJC3 728 aaKnown RBP12.37□□□□□ -0.43
PUF60-213ENST00000528999 HPSEQ9Y251 543 aa12.37□□□□□ -0.43
PUF60-213ENST00000528999 TACC3Q9Y6A5 838 aa12.37□□□□□ -0.43
PUF60-213ENST00000528999 SMTNL1A8MU46 457 aa12.36□□□□□ -0.43
PUF60-213ENST00000528999 BECN2A8MW95 431 aa12.36□□□□□ -0.43
PUF60-213ENST00000528999 KIF28PB7ZC32 967 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms