RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 AFMP43652 599 aa5.51□□□□□ -1.53
COPB1-205ENST00000526527 SF3B2Q13435 895 aaKnown RBP5.51□□□□□ -1.53
COPB1-205ENST00000526527 LIN7BQ9HAP6 207 aa5.51□□□□□ -1.53
COPB1-205ENST00000526527 PPP1R9AQ9ULJ8 1098 aa5.51□□□□□ -1.53
COPB1-205ENST00000526527 CTNND2Q9UQB3 1225 aa5.51□□□□□ -1.53
COPB1-205ENST00000526527 SYNGAP1Q96PV0 1343 aa5.5□□□□□ -1.53
COPB1-205ENST00000526527 ABL1P00519 1130 aa5.5□□□□□ -1.53
COPB1-205ENST00000526527 ZNF211Q13398 564 aaPredicted RBP5.5□□□□□ -1.53
COPB1-205ENST00000526527 FYB2Q5VWT5 728 aa5.5□□□□□ -1.53
COPB1-205ENST00000526527 GALNT12Q8IXK2 581 aa5.5□□□□□ -1.53
COPB1-205ENST00000526527 C20orf173Q96LM9 149 aa5.5□□□□□ -1.53
COPB1-205ENST00000526527 TRIM56Q9BRZ2 755 aaKnown RBP5.5□□□□□ -1.53
COPB1-205ENST00000526527 SNX11Q9Y5W9 270 aa5.5□□□□□ -1.53
COPB1-205ENST00000526527 CEACAM5P06731 702 aa5.49□□□□□ -1.53
COPB1-205ENST00000526527 GLI1P08151 1106 aa5.49□□□□□ -1.53
COPB1-205ENST00000526527 USPL1Q5W0Q7 1092 aa5.49□□□□□ -1.53
COPB1-205ENST00000526527 CORO1BQ9BR76 489 aa5.49□□□□□ -1.53
COPB1-205ENST00000526527 C1orf115Q9H7X2 142 aa5.49□□□□□ -1.53
COPB1-205ENST00000526527 MTMR7Q9Y216 660 aa5.49□□□□□ -1.53
COPB1-205ENST00000526527 NPIPB6E9PJ23 425 aa5.48□□□□□ -1.53
COPB1-205ENST00000526527 ARHGAP27Q6ZUM4 889 aa5.48□□□□□ -1.53
COPB1-205ENST00000526527 HOMEZQ8IX15 550 aa5.48□□□□□ -1.53
COPB1-205ENST00000526527 WDR18Q9BV38 432 aa5.48□□□□□ -1.53
COPB1-205ENST00000526527 KRTAP9-8Q9BYQ0 159 aa5.48□□□□□ -1.53
COPB1-205ENST00000526527 TNKS2Q9H2K2 1166 aa5.48□□□□□ -1.53
COPB1-205ENST00000526527 LEFTY1O75610 366 aa5.47□□□□□ -1.53
COPB1-205ENST00000526527 B3GALT4O96024 378 aa5.47□□□□□ -1.53
COPB1-205ENST00000526527 HOXA5P20719 270 aa5.47□□□□□ -1.53
COPB1-205ENST00000526527 ZP2Q05996 745 aa5.47□□□□□ -1.53
COPB1-205ENST00000526527 TMEM67Q5HYA8 995 aa5.47□□□□□ -1.53
COPB1-205ENST00000526527 KIAA0319Q5VV43 1072 aa5.47□□□□□ -1.53
COPB1-205ENST00000526527 MPZL3Q6UWV2 235 aa5.47□□□□□ -1.53
COPB1-205ENST00000526527 FBXO15Q8NCQ5 510 aaPredicted RBP5.47□□□□□ -1.53
COPB1-205ENST00000526527 RELTQ969Z4 430 aa5.47□□□□□ -1.53
COPB1-205ENST00000526527 CSRNP1Q96S65 589 aa5.47□□□□□ -1.53
COPB1-205ENST00000526527 ZNF576Q9H609 170 aa5.47□□□□□ -1.53
COPB1-205ENST00000526527 TMEM253P0C7T8 217 aa5.46□□□□□ -1.54
COPB1-205ENST00000526527 DDX54Q8TDD1 881 aaKnown RBP5.46□□□□□ -1.54
COPB1-205ENST00000526527 ASB11Q8WXH4 323 aa5.46□□□□□ -1.54
COPB1-205ENST00000526527 DUSP23Q9BVJ7 150 aa5.46□□□□□ -1.54
COPB1-205ENST00000526527 TMPRSS2O15393 492 aa5.45□□□□□ -1.54
COPB1-205ENST00000526527 ITPKAP23677 461 aa5.45□□□□□ -1.54
COPB1-205ENST00000526527 IKZF1Q13422 519 aa5.45□□□□□ -1.54
COPB1-205ENST00000526527 KCNA10Q16322 511 aa5.45□□□□□ -1.54
COPB1-205ENST00000526527 B4GALNT3Q6L9W6 998 aa5.45□□□□□ -1.54
COPB1-205ENST00000526527 SMYD4Q8IYR2 804 aaPredicted RBP5.45□□□□□ -1.54
COPB1-205ENST00000526527 KIRREL1Q96J84 757 aa5.45□□□□□ -1.54
COPB1-205ENST00000526527 EHD4Q9H223 541 aa5.45□□□□□ -1.54
COPB1-205ENST00000526527 PIDD1Q9HB75 910 aa5.45□□□□□ -1.54
COPB1-205ENST00000526527 CD320Q9NPF0 282 aa5.45□□□□□ -1.54
COPB1-205ENST00000526527 BRPF3Q9ULD4 1205 aa5.45□□□□□ -1.54
COPB1-205ENST00000526527 ICMTO60725 284 aa5.44□□□□□ -1.54
COPB1-205ENST00000526527 ORC1Q13415 861 aa5.44□□□□□ -1.54
COPB1-205ENST00000526527 PDE3AQ14432 1141 aa5.44□□□□□ -1.54
COPB1-205ENST00000526527 CIAPIN1Q6FI81 312 aa5.44□□□□□ -1.54
COPB1-205ENST00000526527 DBX2Q6ZNG2 339 aa5.44□□□□□ -1.54
COPB1-205ENST00000526527 FANCD2OSQ96PS1 177 aa5.44□□□□□ -1.54
COPB1-205ENST00000526527 ATXN3LQ9H3M9 355 aa5.44□□□□□ -1.54
COPB1-205ENST00000526527 NPHS2Q9NP85 383 aa5.44□□□□□ -1.54
COPB1-205ENST00000526527 USTQ9Y2C2 406 aa5.44□□□□□ -1.54
COPB1-205ENST00000526527 H3BRB1 525 aa5.43□□□□□ -1.54
COPB1-205ENST00000526527 LIG1P18858 919 aa5.43□□□□□ -1.54
COPB1-205ENST00000526527 ITIH2P19823 946 aa5.43□□□□□ -1.54
COPB1-205ENST00000526527 ATG14Q6ZNE5 492 aa5.43□□□□□ -1.54
COPB1-205ENST00000526527 CYFIP1Q7L576 1253 aa5.43□□□□□ -1.54
COPB1-205ENST00000526527 WDR89Q96FK6 387 aaPredicted RBP5.43□□□□□ -1.54
COPB1-205ENST00000526527 HEXIM2Q96MH2 286 aaKnown RBP5.43□□□□□ -1.54
COPB1-205ENST00000526527 DIRC2Q96SL1 478 aa5.43□□□□□ -1.54
COPB1-205ENST00000526527 TUT1Q9H6E5 874 aaKnown RBP5.43□□□□□ -1.54
COPB1-205ENST00000526527 DISC1Q9NRI5 854 aa5.43□□□□□ -1.54
COPB1-205ENST00000526527 EGFL7Q9UHF1 273 aa5.43□□□□□ -1.54
COPB1-205ENST00000526527 PCOLCE2Q9UKZ9 415 aa5.43□□□□□ -1.54
COPB1-205ENST00000526527 CPNE3O75131 537 aaKnown RBP5.42□□□□□ -1.54
COPB1-205ENST00000526527 NEFLP07196 543 aa5.42□□□□□ -1.54
COPB1-205ENST00000526527 SLFN14P0C7P3 912 aa5.42□□□□□ -1.54
COPB1-205ENST00000526527 MED14OSP0DP75 135 aa5.42□□□□□ -1.54
COPB1-205ENST00000526527 SERPINB4P48594 390 aa5.42□□□□□ -1.54
COPB1-205ENST00000526527 ZNF157P51786 506 aaPredicted RBP5.42□□□□□ -1.54
COPB1-205ENST00000526527 AP3B2Q13367 1082 aa5.42□□□□□ -1.54
COPB1-205ENST00000526527 FAM214BQ7L5A3 538 aa5.42□□□□□ -1.54
COPB1-205ENST00000526527 ZC3H12CQ9C0D7 883 aaKnown RBP5.42□□□□□ -1.54
COPB1-205ENST00000526527 NSUN3Q9H649 340 aaKnown RBP5.42□□□□□ -1.54
COPB1-205ENST00000526527 CCDC86Q9H6F5 360 aaKnown RBP5.42□□□□□ -1.54
COPB1-205ENST00000526527 ABCB6Q9NP58 842 aa5.42□□□□□ -1.54
COPB1-205ENST00000526527 PATL2C9JE40 543 aaKnown RBP5.41□□□□□ -1.54
COPB1-205ENST00000526527 RNGTTO60942 597 aaKnown RBP5.41□□□□□ -1.54
COPB1-205ENST00000526527 ARHGAP4P98171 946 aa5.41□□□□□ -1.54
COPB1-205ENST00000526527 ID3Q02535 119 aa5.41□□□□□ -1.54
COPB1-205ENST00000526527 PTPN12Q05209 780 aaKnown RBP5.41□□□□□ -1.54
COPB1-205ENST00000526527 FAAP100Q0VG06 881 aa5.41□□□□□ -1.54
COPB1-205ENST00000526527 GLYCTKQ8IVS8 523 aa5.41□□□□□ -1.54
COPB1-205ENST00000526527 SMG5Q9UPR3 1016 aaKnown RBP5.41□□□□□ -1.54
COPB1-205ENST00000526527 TCAF2A6NFQ2 919 aa5.4□□□□□ -1.54
COPB1-205ENST00000526527 NDUFB5O43674 189 aa5.4□□□□□ -1.54
COPB1-205ENST00000526527 ZNF862O60290 1169 aa5.4□□□□□ -1.54
COPB1-205ENST00000526527 FOXD2O60548 495 aaPredicted RBP5.4□□□□□ -1.54
COPB1-205ENST00000526527 PDIA4P13667 645 aaKnown RBP5.4□□□□□ -1.54
COPB1-205ENST00000526527 TTLL4Q14679 1199 aa5.4□□□□□ -1.54
COPB1-205ENST00000526527 PRPF40BQ6NWY9 871 aaKnown RBP5.4□□□□□ -1.54
COPB1-205ENST00000526527 CCDC74AQ96AQ1 378 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms