RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 PANK1Q8TE04 598 aa13.67□□□□□ -0.22
NEDD8-204ENST00000526430 NBPF3Q9H094 633 aa13.67□□□□□ -0.22
NEDD8-204ENST00000526430 DNAH12Q6ZR08 3092 aa13.67□□□□□ -0.22
NEDD8-204ENST00000526430 LTBP2Q14767 1821 aa13.67□□□□□ -0.22
NEDD8-204ENST00000526430 SYN1P17600 705 aa13.66□□□□□ -0.22
NEDD8-204ENST00000526430 FOXO4P98177 505 aa13.66□□□□□ -0.22
NEDD8-204ENST00000526430 PLA2G12BQ9BX93 195 aa13.66□□□□□ -0.22
NEDD8-204ENST00000526430 TTF2Q9UNY4 1162 aaKnown RBP13.66□□□□□ -0.22
NEDD8-204ENST00000526430 PLXNB2O15031 1838 aa13.66□□□□□ -0.22
NEDD8-204ENST00000526430 DOCK2Q92608 1830 aa13.66□□□□□ -0.22
NEDD8-204ENST00000526430 GRM8O00222 908 aa13.65□□□□□ -0.22
NEDD8-204ENST00000526430 PLA2G5P39877 138 aa13.65□□□□□ -0.22
NEDD8-204ENST00000526430 MFSD14BQ5SR56 506 aa13.65□□□□□ -0.22
NEDD8-204ENST00000526430 FKBP1CQ5VVH2 108 aa13.65□□□□□ -0.22
NEDD8-204ENST00000526430 DCAF15Q66K64 600 aa13.65□□□□□ -0.22
NEDD8-204ENST00000526430 UBE3BQ7Z3V4 1068 aa13.65□□□□□ -0.22
NEDD8-204ENST00000526430 FAM83AQ86UY5 434 aa13.65□□□□□ -0.22
NEDD8-204ENST00000526430 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.65□□□□□ -0.22
NEDD8-204ENST00000526430 SNAP23O00161 211 aa13.64□□□□□ -0.23
NEDD8-204ENST00000526430 CSF1RP07333 972 aa13.64□□□□□ -0.23
NEDD8-204ENST00000526430 CRKP46108 304 aa13.64□□□□□ -0.23
NEDD8-204ENST00000526430 SUCLG2Q96I99 432 aa13.64□□□□□ -0.23
NEDD8-204ENST00000526430 MEIS3Q99687 375 aa13.64□□□□□ -0.23
NEDD8-204ENST00000526430 DOCK1Q14185 1865 aa13.63□□□□□ -0.23
NEDD8-204ENST00000526430 RRP1P56182 461 aaKnown RBP13.63□□□□□ -0.23
NEDD8-204ENST00000526430 HDLBPQ00341 1268 aaKnown RBP13.63□□□□□ -0.23
NEDD8-204ENST00000526430 PDE3AQ14432 1141 aa13.63□□□□□ -0.23
NEDD8-204ENST00000526430 MAFAQ8NHW3 353 aaPredicted RBP13.63□□□□□ -0.23
NEDD8-204ENST00000526430 ZNF341Q9BYN7 854 aa13.63□□□□□ -0.23
NEDD8-204ENST00000526430 C11orf49Q9H6J7 331 aa13.63□□□□□ -0.23
NEDD8-204ENST00000526430 JAG2Q9Y219 1238 aa13.63□□□□□ -0.23
NEDD8-204ENST00000526430 SUPT16HQ9Y5B9 1047 aaKnown RBP13.63□□□□□ -0.23
NEDD8-204ENST00000526430 TNPO2O14787 897 aaKnown RBP13.62□□□□□ -0.23
NEDD8-204ENST00000526430 TAF5LO75529 589 aa13.62□□□□□ -0.23
NEDD8-204ENST00000526430 ZNF697Q5TEC3 545 aa13.62□□□□□ -0.23
NEDD8-204ENST00000526430 GPAT2Q6NUI2 795 aa13.62□□□□□ -0.23
NEDD8-204ENST00000526430 ANKRD44Q8N8A2 993 aa13.62□□□□□ -0.23
NEDD8-204ENST00000526430 TDRD7Q8NHU6 1098 aaKnown RBP13.62□□□□□ -0.23
NEDD8-204ENST00000526430 SLC45A1Q9Y2W3 748 aa13.62□□□□□ -0.23
NEDD8-204ENST00000526430 BDP1A6H8Y1 2624 aa13.62□□□□□ -0.23
NEDD8-204ENST00000526430 CXCL11O14625 94 aa13.61□□□□□ -0.23
NEDD8-204ENST00000526430 CYP2C8P10632 490 aa13.61□□□□□ -0.23
NEDD8-204ENST00000526430 INPP5BP32019 993 aa13.61□□□□□ -0.23
NEDD8-204ENST00000526430 RABL6Q3YEC7 729 aaPredicted RBP13.61□□□□□ -0.23
NEDD8-204ENST00000526430 NOL9Q5SY16 702 aaKnown RBP13.61□□□□□ -0.23
NEDD8-204ENST00000526430 CDX2Q99626 313 aaPredicted RBP13.61□□□□□ -0.23
NEDD8-204ENST00000526430 C9orf78Q9NZ63 289 aaPredicted RBP13.61□□□□□ -0.23
NEDD8-204ENST00000526430 ZNF112Q9UJU3 913 aa13.61□□□□□ -0.23
NEDD8-204ENST00000526430 COG6Q9Y2V7 657 aa13.61□□□□□ -0.23
NEDD8-204ENST00000526430 LOC285556D6RIA3 1793 aa13.6□□□□□ -0.23
NEDD8-204ENST00000526430 HMGCRP04035 888 aa13.6□□□□□ -0.23
NEDD8-204ENST00000526430 MVPQ14764 893 aaKnown RBP13.6□□□□□ -0.23
NEDD8-204ENST00000526430 FAM161BQ96MY7 647 aa13.6□□□□□ -0.23
NEDD8-204ENST00000526430 TMOD2Q9NZR1 351 aa13.6□□□□□ -0.23
NEDD8-204ENST00000526430 OGDHLQ9ULD0 1010 aa13.6□□□□□ -0.23
NEDD8-204ENST00000526430 PFASO15067 1338 aa13.6□□□□□ -0.23
NEDD8-204ENST00000526430 ANKRD18BA2A2Z9 1011 aa13.59□□□□□ -0.23
NEDD8-204ENST00000526430 TNFRSF10AO00220 468 aa13.59□□□□□ -0.23
NEDD8-204ENST00000526430 CACNB3P54284 484 aa13.59□□□□□ -0.23
NEDD8-204ENST00000526430 COA7Q96BR5 231 aa13.59□□□□□ -0.23
NEDD8-204ENST00000526430 FAM122AQ96E09 287 aa13.59□□□□□ -0.23
NEDD8-204ENST00000526430 MRIQ9BWK5 157 aa13.59□□□□□ -0.23
NEDD8-204ENST00000526430 HOXD11P31277 338 aaPredicted RBP13.58□□□□□ -0.24
NEDD8-204ENST00000526430 LMBR1LQ6UX01 489 aa13.58□□□□□ -0.24
NEDD8-204ENST00000526430 FASTKD5Q7L8L6 764 aaKnown RBP13.58□□□□□ -0.24
NEDD8-204ENST00000526430 TEKT1Q969V4 418 aa13.58□□□□□ -0.24
NEDD8-204ENST00000526430 ZDHHC15Q96MV8 337 aa13.58□□□□□ -0.24
NEDD8-204ENST00000526430 BICC1Q9H694 974 aaKnown RBP13.58□□□□□ -0.24
NEDD8-204ENST00000526430 HMX1Q9NP08 348 aaPredicted RBP13.58□□□□□ -0.24
NEDD8-204ENST00000526430 ZBTB40Q9NUA8 1239 aa13.58□□□□□ -0.24
NEDD8-204ENST00000526430 A0A0G2JLL6 359 aaPredicted RBP13.57□□□□□ -0.24
NEDD8-204ENST00000526430 COL6A1P12109 1028 aa13.57□□□□□ -0.24
NEDD8-204ENST00000526430 RFX5P48382 616 aaPredicted RBP13.57□□□□□ -0.24
NEDD8-204ENST00000526430 PRRT2Q7Z6L0 340 aaPredicted RBP13.57□□□□□ -0.24
NEDD8-204ENST00000526430 ITPRIPQ8IWB1 547 aa13.57□□□□□ -0.24
NEDD8-204ENST00000526430 FTSJ3Q8IY81 847 aaKnown RBP13.57□□□□□ -0.24
NEDD8-204ENST00000526430 LRRFIP2Q9Y608 721 aaKnown RBP13.57□□□□□ -0.24
NEDD8-204ENST00000526430 ATAD5Q96QE3 1844 aa13.57□□□□□ -0.24
NEDD8-204ENST00000526430 RLFQ13129 1914 aa13.56□□□□□ -0.24
NEDD8-204ENST00000526430 MS4A1P11836 297 aa13.56□□□□□ -0.24
NEDD8-204ENST00000526430 MDM2Q00987 491 aaPredicted RBP13.56□□□□□ -0.24
NEDD8-204ENST00000526430 IFIT5Q13325 482 aaKnown RBP13.56□□□□□ -0.24
NEDD8-204ENST00000526430 TJAP1Q5JTD0 557 aa13.56□□□□□ -0.24
NEDD8-204ENST00000526430 MIGA2Q7L4E1 593 aa13.56□□□□□ -0.24
NEDD8-204ENST00000526430 SEMA6BQ9H3T3 888 aa13.56□□□□□ -0.24
NEDD8-204ENST00000526430 RAPGEFL1Q9UHV5 662 aa13.56□□□□□ -0.24
NEDD8-204ENST00000526430 TAOK2Q9UL54 1235 aa13.56□□□□□ -0.24
NEDD8-204ENST00000526430 MYO9BQ13459 2157 aa13.55□□□□□ -0.24
NEDD8-204ENST00000526430 UBTFL1P0CB47 393 aaPredicted RBP13.55□□□□□ -0.24
NEDD8-204ENST00000526430 HIBADHP31937 336 aaKnown RBP13.55□□□□□ -0.24
NEDD8-204ENST00000526430 MTX1Q13505 466 aa13.55□□□□□ -0.24
NEDD8-204ENST00000526430 UBE4AQ14139 1066 aa13.55□□□□□ -0.24
NEDD8-204ENST00000526430 GRIK5Q16478 980 aa13.55□□□□□ -0.24
NEDD8-204ENST00000526430 FAM110CQ1W6H9 321 aa13.55□□□□□ -0.24
NEDD8-204ENST00000526430 APOBEC3HQ6NTF7 200 aaKnown RBP13.55□□□□□ -0.24
NEDD8-204ENST00000526430 SIRT2Q8IXJ6 389 aa13.55□□□□□ -0.24
NEDD8-204ENST00000526430 SMCR8Q8TEV9 937 aaPredicted RBP13.55□□□□□ -0.24
NEDD8-204ENST00000526430 TBC1D22AQ8WUA7 517 aa13.55□□□□□ -0.24
NEDD8-204ENST00000526430 CRBNQ96SW2 442 aa13.55□□□□□ -0.24
NEDD8-204ENST00000526430 C1orf115Q9H7X2 142 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms