RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 HSP90AB4PQ58FF6 505 aa22.73■■□□□ 1.23
CAPN1-203ENST00000525013 NOL10Q9BSC4 688 aaKnown RBP22.73■■□□□ 1.23
CAPN1-203ENST00000525013 CHMP4BQ9H444 224 aaKnown RBP22.73■■□□□ 1.23
CAPN1-203ENST00000525013 DDX4Q9NQI0 724 aaKnown RBP22.73■■□□□ 1.23
CAPN1-203ENST00000525013 ZBTB40Q9NUA8 1239 aa22.73■■□□□ 1.23
CAPN1-203ENST00000525013 IRF6O14896 467 aa22.72■■□□□ 1.23
CAPN1-203ENST00000525013 HMMRO75330 724 aa22.72■■□□□ 1.23
CAPN1-203ENST00000525013 RHBDL3P58872 404 aa22.72■■□□□ 1.23
CAPN1-203ENST00000525013 PPIL2Q13356 520 aa22.72■■□□□ 1.23
CAPN1-203ENST00000525013 ZNF512BQ96KM6 892 aaPredicted RBP22.72■■□□□ 1.23
CAPN1-203ENST00000525013 ZNF112Q9UJU3 913 aa22.72■■□□□ 1.23
CAPN1-203ENST00000525013 RFX7Q2KHR2 1363 aa22.72■■□□□ 1.23
CAPN1-203ENST00000525013 APBB1O00213 710 aa22.71■■□□□ 1.23
CAPN1-203ENST00000525013 CYP2E1P05181 493 aaPredicted RBP22.71■■□□□ 1.23
CAPN1-203ENST00000525013 CETPP11597 493 aa22.71■■□□□ 1.23
CAPN1-203ENST00000525013 ZAP70P43403 619 aa22.71■■□□□ 1.23
CAPN1-203ENST00000525013 SNAPC2Q13487 334 aa22.71■■□□□ 1.23
CAPN1-203ENST00000525013 PKN2Q16513 984 aaKnown RBP22.71■■□□□ 1.23
CAPN1-203ENST00000525013 NAA16Q6N069 864 aaPredicted RBP22.71■■□□□ 1.23
CAPN1-203ENST00000525013 SH3BP5LQ7L8J4 393 aa22.71■■□□□ 1.23
CAPN1-203ENST00000525013 AACSQ86V21 672 aa22.71■■□□□ 1.23
CAPN1-203ENST00000525013 RPAP2Q8IXW5 612 aaPredicted RBP22.71■■□□□ 1.23
CAPN1-203ENST00000525013 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.71■■□□□ 1.23
CAPN1-203ENST00000525013 BCL11AQ9H165 835 aa22.71■■□□□ 1.23
CAPN1-203ENST00000525013 DDTLA6NHG4 134 aaPredicted RBP22.7■■□□□ 1.22
CAPN1-203ENST00000525013 PPATQ06203 517 aa22.7■■□□□ 1.22
CAPN1-203ENST00000525013 IL1RAPL2Q9NP60 686 aa22.7■■□□□ 1.22
CAPN1-203ENST00000525013 MAP4K4O95819 1239 aaPredicted RBP22.69■■□□□ 1.22
CAPN1-203ENST00000525013 TAF1CQ15572 869 aaPredicted RBP22.69■■□□□ 1.22
CAPN1-203ENST00000525013 C20orf194Q5TEA3 1177 aa22.69■■□□□ 1.22
CAPN1-203ENST00000525013 TEX11Q8IYF3 940 aa22.69■■□□□ 1.22
CAPN1-203ENST00000525013 FAM43AQ8N2R8 423 aa22.69■■□□□ 1.22
CAPN1-203ENST00000525013 MAST2Q6P0Q8 1798 aa22.68■■□□□ 1.22
CAPN1-203ENST00000525013 ATRNL1Q5VV63 1379 aa22.68■■□□□ 1.22
CAPN1-203ENST00000525013 BAG3O95817 575 aa22.68■■□□□ 1.22
CAPN1-203ENST00000525013 RHPN1Q8TCX5 695 aa22.68■■□□□ 1.22
CAPN1-203ENST00000525013 ZFYVE28Q9HCC9 887 aa22.68■■□□□ 1.22
CAPN1-203ENST00000525013 PIH1D3Q9NQM4 214 aaKnown RBP22.68■■□□□ 1.22
CAPN1-203ENST00000525013 AATFQ9NY61 560 aaKnown RBP eCLIP22.68■■□□□ 1.22
CAPN1-203ENST00000525013 NPM3O75607 178 aaKnown RBP22.67■■□□□ 1.22
CAPN1-203ENST00000525013 PDE3AQ14432 1141 aa22.67■■□□□ 1.22
CAPN1-203ENST00000525013 NOL9Q5SY16 702 aaKnown RBP22.67■■□□□ 1.22
CAPN1-203ENST00000525013 SIRT2Q8IXJ6 389 aa22.67■■□□□ 1.22
CAPN1-203ENST00000525013 SH3RF3Q8TEJ3 882 aaPredicted RBP22.67■■□□□ 1.22
CAPN1-203ENST00000525013 PICK1Q9NRD5 415 aa22.67■■□□□ 1.22
CAPN1-203ENST00000525013 HPS5Q9UPZ3 1129 aa22.67■■□□□ 1.22
CAPN1-203ENST00000525013 PHF20L1A8MW92 1017 aa22.66■■□□□ 1.22
CAPN1-203ENST00000525013 SLURP2P0DP57 97 aa22.66■■□□□ 1.22
CAPN1-203ENST00000525013 ERO1AQ96HE7 468 aa22.66■■□□□ 1.22
CAPN1-203ENST00000525013 TRIM17Q9Y577 477 aa22.66■■□□□ 1.22
CAPN1-203ENST00000525013 NDUFB9Q9Y6M9 179 aa22.66■■□□□ 1.22
CAPN1-203ENST00000525013 BTBD19C9JJ37 291 aa22.65■■□□□ 1.22
CAPN1-203ENST00000525013 IDH1O75874 414 aaKnown RBP22.65■■□□□ 1.22
CAPN1-203ENST00000525013 PLCG2P16885 1265 aa22.65■■□□□ 1.22
CAPN1-203ENST00000525013 SP3Q02447 781 aa22.65■■□□□ 1.22
CAPN1-203ENST00000525013 FBXO46Q6PJ61 603 aaPredicted RBP22.65■■□□□ 1.22
CAPN1-203ENST00000525013 SCYL3Q8IZE3 742 aa22.65■■□□□ 1.22
CAPN1-203ENST00000525013 CLASRPQ8N2M8 674 aaKnown RBP22.65■■□□□ 1.22
CAPN1-203ENST00000525013 CD99L2Q8TCZ2 262 aa22.65■■□□□ 1.22
CAPN1-203ENST00000525013 KIF1BPQ96EK5 621 aa22.65■■□□□ 1.22
CAPN1-203ENST00000525013 OSBPL5Q9H0X9 879 aaPredicted RBP22.65■■□□□ 1.22
CAPN1-203ENST00000525013 MAP3K10Q02779 954 aa22.64■■□□□ 1.21
CAPN1-203ENST00000525013 ADGRA1Q86SQ6 560 aa22.64■■□□□ 1.21
CAPN1-203ENST00000525013 ZHX2Q9Y6X8 837 aa22.64■■□□□ 1.21
CAPN1-203ENST00000525013 CDK5RAP2Q96SN8 1893 aa22.64■■□□□ 1.21
CAPN1-203ENST00000525013 FAM196BA6NMK8 535 aa22.63■■□□□ 1.21
CAPN1-203ENST00000525013 IFIT2P09913 472 aaKnown RBP22.63■■□□□ 1.21
CAPN1-203ENST00000525013 CYP7A1P22680 504 aa22.63■■□□□ 1.21
CAPN1-203ENST00000525013 PPP4CP60510 307 aa22.63■■□□□ 1.21
CAPN1-203ENST00000525013 OTOP1Q7RTM1 612 aa22.63■■□□□ 1.21
CAPN1-203ENST00000525013 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.63■■□□□ 1.21
CAPN1-203ENST00000525013 ZCCHC17Q9NP64 241 aaKnown RBP22.63■■□□□ 1.21
CAPN1-203ENST00000525013 KCNH4Q9UQ05 1017 aa22.63■■□□□ 1.21
CAPN1-203ENST00000525013 DOCK1Q14185 1865 aa22.62■■□□□ 1.21
CAPN1-203ENST00000525013 CTNND1O60716 968 aaKnown RBP22.62■■□□□ 1.21
CAPN1-203ENST00000525013 IGSF3O75054 1194 aa22.62■■□□□ 1.21
CAPN1-203ENST00000525013 RAB11FIP3O75154 756 aa22.62■■□□□ 1.21
CAPN1-203ENST00000525013 TGFBRAP1Q8WUH2 860 aa22.62■■□□□ 1.21
CAPN1-203ENST00000525013 CXCL11O14625 94 aa22.61■■□□□ 1.21
CAPN1-203ENST00000525013 TBC1D12O60347 775 aa22.61■■□□□ 1.21
CAPN1-203ENST00000525013 PTPRAP18433 802 aa22.61■■□□□ 1.21
CAPN1-203ENST00000525013 SOX10P56693 466 aa22.61■■□□□ 1.21
CAPN1-203ENST00000525013 MAPKAPK5Q8IW41 473 aa22.61■■□□□ 1.21
CAPN1-203ENST00000525013 MAGEB6Q8N7X4 407 aa22.61■■□□□ 1.21
CAPN1-203ENST00000525013 ANTXR1Q9H6X2 564 aa22.61■■□□□ 1.21
CAPN1-203ENST00000525013 EFCC1Q9HA90 598 aa22.61■■□□□ 1.21
CAPN1-203ENST00000525013 COL2A1P02458 1487 aaPredicted RBP22.6■■□□□ 1.21
CAPN1-203ENST00000525013 DYNLL1P63167 89 aaKnown RBP22.6■■□□□ 1.21
CAPN1-203ENST00000525013 MAP3K12Q12852 859 aa22.6■■□□□ 1.21
CAPN1-203ENST00000525013 ANKRD23Q86SG2 305 aa22.6■■□□□ 1.21
CAPN1-203ENST00000525013 FOCADQ5VW36 1801 aa22.59■■□□□ 1.21
CAPN1-203ENST00000525013 PDHXO00330 501 aa22.59■■□□□ 1.21
CAPN1-203ENST00000525013 TLR2O60603 784 aa22.59■■□□□ 1.21
CAPN1-203ENST00000525013 RGS19P49795 217 aa22.59■■□□□ 1.21
CAPN1-203ENST00000525013 MLLT1Q03111 559 aaPredicted RBP22.59■■□□□ 1.21
CAPN1-203ENST00000525013 MIGA1Q8NAN2 632 aa22.59■■□□□ 1.21
CAPN1-203ENST00000525013 DHX36Q9H2U1 1008 aaKnown RBP22.59■■□□□ 1.21
CAPN1-203ENST00000525013 ARHGEF6Q15052 776 aa22.58■■□□□ 1.21
CAPN1-203ENST00000525013 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.58■■□□□ 1.21
CAPN1-203ENST00000525013 PI4KBQ9UBF8 816 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms