RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 C14orf37Q86TY3 774 aa3.53□□□□□ -1.84
CD44-212ENST00000524922 TP53INP2Q8IXH6 220 aa3.53□□□□□ -1.84
CD44-212ENST00000524922 SMYD4Q8IYR2 804 aaPredicted RBP3.53□□□□□ -1.84
CD44-212ENST00000524922 AGBL5Q8NDL9 886 aa3.53□□□□□ -1.84
CD44-212ENST00000524922 FLCNQ8NFG4 579 aa3.53□□□□□ -1.84
CD44-212ENST00000524922 DDX54Q8TDD1 881 aaKnown RBP3.53□□□□□ -1.84
CD44-212ENST00000524922 ANKRD24Q8TF21 1146 aa3.53□□□□□ -1.84
CD44-212ENST00000524922 ISL2Q96A47 359 aa3.53□□□□□ -1.84
CD44-212ENST00000524922 NECAB3Q96P71 396 aaPredicted RBP3.53□□□□□ -1.84
CD44-212ENST00000524922 SETDB2Q96T68 719 aa3.53□□□□□ -1.84
CD44-212ENST00000524922 DUSP23Q9BVJ7 150 aa3.53□□□□□ -1.84
CD44-212ENST00000524922 TNKS2Q9H2K2 1166 aa3.53□□□□□ -1.84
CD44-212ENST00000524922 ATXN3LQ9H3M9 355 aa3.53□□□□□ -1.84
CD44-212ENST00000524922 MBNL3Q9NUK0 354 aaKnown RBP3.53□□□□□ -1.84
CD44-212ENST00000524922 SHROOM4Q9ULL8 1493 aa3.53□□□□□ -1.84
CD44-212ENST00000524922 RBAK-RBAKDNI3L0D1 243 aa3.52□□□□□ -1.85
CD44-212ENST00000524922 CD8BP10966 210 aa3.52□□□□□ -1.85
CD44-212ENST00000524922 XRCC5P13010 732 aaKnown RBP3.52□□□□□ -1.85
CD44-212ENST00000524922 HCLS1P14317 486 aaPredicted RBP3.52□□□□□ -1.85
CD44-212ENST00000524922 FUT4P22083 530 aa3.52□□□□□ -1.85
CD44-212ENST00000524922 ARNTP27540 789 aa3.52□□□□□ -1.85
CD44-212ENST00000524922 ERVK-24P63145 666 aa3.52□□□□□ -1.85
CD44-212ENST00000524922 ZNF792Q3KQV3 632 aa3.52□□□□□ -1.85
CD44-212ENST00000524922 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.52□□□□□ -1.85
CD44-212ENST00000524922 LCE4AQ5TA78 99 aa3.52□□□□□ -1.85
CD44-212ENST00000524922 SULF2Q8IWU5 870 aa3.52□□□□□ -1.85
CD44-212ENST00000524922 GRIN3AQ8TCU5 1115 aa3.52□□□□□ -1.85
CD44-212ENST00000524922 GPBAR1Q8TDU6 330 aa3.52□□□□□ -1.85
CD44-212ENST00000524922 KRTAP4-7Q9BYR0 210 aa3.52□□□□□ -1.85
CD44-212ENST00000524922 OSBPL7Q9BZF2 842 aa3.52□□□□□ -1.85
CD44-212ENST00000524922 MKNK2Q9HBH9 465 aa3.52□□□□□ -1.85
CD44-212ENST00000524922 DCTN4Q9UJW0 460 aa3.52□□□□□ -1.85
CD44-212ENST00000524922 SLC5A6Q9Y289 635 aa3.52□□□□□ -1.85
CD44-212ENST00000524922 C8AP07357 584 aa3.51□□□□□ -1.85
CD44-212ENST00000524922 RNASE1P07998 156 aaKnown RBP3.51□□□□□ -1.85
CD44-212ENST00000524922 SLFN14P0C7P3 912 aa3.51□□□□□ -1.85
CD44-212ENST00000524922 NME2P22392 152 aa3.51□□□□□ -1.85
CD44-212ENST00000524922 PRKCQQ04759 706 aa3.51□□□□□ -1.85
CD44-212ENST00000524922 FMR1Q06787 632 aaKnown RBP eCLIP3.51□□□□□ -1.85
CD44-212ENST00000524922 CYP27C1Q4G0S4 372 aa3.51□□□□□ -1.85
CD44-212ENST00000524922 DTHD1Q6ZMT9 781 aa3.51□□□□□ -1.85
CD44-212ENST00000524922 RNF214Q8ND24 703 aa3.51□□□□□ -1.85
CD44-212ENST00000524922 CCER1Q8TC90 406 aaPredicted RBP3.51□□□□□ -1.85
CD44-212ENST00000524922 NETO1Q8TDF5 533 aa3.51□□□□□ -1.85
CD44-212ENST00000524922 MISP3Q96FF7 219 aa3.51□□□□□ -1.85
CD44-212ENST00000524922 PNMA6FA0A0J9YX94 578 aa3.5□□□□□ -1.85
CD44-212ENST00000524922 CEACAM5P06731 702 aa3.5□□□□□ -1.85
CD44-212ENST00000524922 FZD5Q13467 585 aa3.5□□□□□ -1.85
CD44-212ENST00000524922 NKPD1Q17RQ9 610 aa3.5□□□□□ -1.85
CD44-212ENST00000524922 CILP2Q8IUL8 1156 aa3.5□□□□□ -1.85
CD44-212ENST00000524922 SPACA3Q8IXA5 215 aa3.5□□□□□ -1.85
CD44-212ENST00000524922 STK11IPQ8N1F8 1099 aa3.5□□□□□ -1.85
CD44-212ENST00000524922 GPN3Q9UHW5 284 aaPredicted RBP3.5□□□□□ -1.85
CD44-212ENST00000524922 VAV3Q9UKW4 847 aa3.5□□□□□ -1.85
CD44-212ENST00000524922 PCOLCE2Q9UKZ9 415 aa3.5□□□□□ -1.85
CD44-212ENST00000524922 CNTNAP4Q9C0A0 1308 aa3.49□□□□□ -1.85
CD44-212ENST00000524922 BRD1O95696 1058 aa3.49□□□□□ -1.85
CD44-212ENST00000524922 EOMESO95936 686 aa3.49□□□□□ -1.85
CD44-212ENST00000524922 PTPN11Q06124 597 aaPredicted RBP3.49□□□□□ -1.85
CD44-212ENST00000524922 PPP2R3AQ06190 1150 aa3.49□□□□□ -1.85
CD44-212ENST00000524922 PLCL1Q15111 1095 aa3.49□□□□□ -1.85
CD44-212ENST00000524922 PPM1JQ5JR12 505 aa3.49□□□□□ -1.85
CD44-212ENST00000524922 MAP1SQ66K74 1059 aaPredicted RBP3.49□□□□□ -1.85
CD44-212ENST00000524922 ATG4DQ86TL0 474 aaPredicted RBP3.49□□□□□ -1.85
CD44-212ENST00000524922 LRRN4CLQ8ND94 238 aa3.49□□□□□ -1.85
CD44-212ENST00000524922 TMC1Q8TDI8 760 aa3.49□□□□□ -1.85
CD44-212ENST00000524922 KCNB2Q92953 911 aa3.49□□□□□ -1.85
CD44-212ENST00000524922 ASIC4Q96FT7 647 aa3.49□□□□□ -1.85
CD44-212ENST00000524922 PIDD1Q9HB75 910 aa3.49□□□□□ -1.85
CD44-212ENST00000524922 NLRP2Q9NX02 1062 aa3.49□□□□□ -1.85
CD44-212ENST00000524922 WWC3Q9ULE0 1092 aa3.49□□□□□ -1.85
CD44-212ENST00000524922 PPM1HQ9ULR3 514 aa3.49□□□□□ -1.85
CD44-212ENST00000524922 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.48□□□□□ -1.85
CD44-212ENST00000524922 SUPT5HO00267 1087 aaKnown RBP3.48□□□□□ -1.85
CD44-212ENST00000524922 IGF2BP3O00425 579 aaKnown RBP eCLIP3.48□□□□□ -1.85
CD44-212ENST00000524922 FBXO24O75426 580 aa3.48□□□□□ -1.85
CD44-212ENST00000524922 TRIM37O94972 964 aa3.48□□□□□ -1.85
CD44-212ENST00000524922 PLCB3Q01970 1234 aa3.48□□□□□ -1.85
CD44-212ENST00000524922 IFI16Q16666 785 aaKnown RBP3.48□□□□□ -1.85
CD44-212ENST00000524922 ZBTB37Q5TC79 503 aa3.48□□□□□ -1.85
CD44-212ENST00000524922 TOP6BLQ8N6T0 577 aa3.48□□□□□ -1.85
CD44-212ENST00000524922 FBF1Q8TES7 1133 aa3.48□□□□□ -1.85
CD44-212ENST00000524922 GAL3ST3Q96A11 431 aa3.48□□□□□ -1.85
CD44-212ENST00000524922 ARID3AQ99856 593 aa3.48□□□□□ -1.85
CD44-212ENST00000524922 AKAP2Q9Y2D5 859 aa3.48□□□□□ -1.85
CD44-212ENST00000524922 MYO15BQ96JP2 1530 aa3.48□□□□□ -1.85
CD44-212ENST00000524922 RNGTTO60942 597 aaKnown RBP3.47□□□□□ -1.85
CD44-212ENST00000524922 CELA3AP09093 270 aa3.47□□□□□ -1.85
CD44-212ENST00000524922 MESP2Q0VG99 397 aa3.47□□□□□ -1.85
CD44-212ENST00000524922 INPP5AQ14642 412 aa3.47□□□□□ -1.85
CD44-212ENST00000524922 AOC3Q16853 763 aa3.47□□□□□ -1.85
CD44-212ENST00000524922 SCARA3Q6AZY7 606 aa3.47□□□□□ -1.85
CD44-212ENST00000524922 TPTE2Q6XPS3 522 aa3.47□□□□□ -1.85
CD44-212ENST00000524922 CYFIP1Q7L576 1253 aa3.47□□□□□ -1.85
CD44-212ENST00000524922 C12orf40Q86WS4 652 aa3.47□□□□□ -1.85
CD44-212ENST00000524922 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.47□□□□□ -1.85
CD44-212ENST00000524922 FLAD1Q8NFF5 587 aa3.47□□□□□ -1.85
CD44-212ENST00000524922 ASB16Q96NS5 453 aa3.47□□□□□ -1.85
CD44-212ENST00000524922 SRCIN1Q9C0H9 1055 aa3.47□□□□□ -1.85
CD44-212ENST00000524922 FBRSQ9HAH7 460 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms