RNA–Protein interactions for RNA: ENST00000524204.1

NPM1-212, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-212ENST00000524204 B3GALT4O96024 378 aa8.04□□□□□ -1.12
NPM1-212ENST00000524204 MPSTP25325 297 aa8.04□□□□□ -1.12
NPM1-212ENST00000524204 MPZL3Q6UWV2 235 aa8.04□□□□□ -1.12
NPM1-212ENST00000524204 SMYD4Q8IYR2 804 aaPredicted RBP8.04□□□□□ -1.12
NPM1-212ENST00000524204 HELQQ8TDG4 1101 aa8.04□□□□□ -1.12
NPM1-212ENST00000524204 DISC1Q9NRI5 854 aa8.04□□□□□ -1.12
NPM1-212ENST00000524204 A0A1W2PP55 124 aa8.03□□□□□ -1.12
NPM1-212ENST00000524204 NFIBO00712 420 aa8.03□□□□□ -1.12
NPM1-212ENST00000524204 HOXA5P20719 270 aa8.03□□□□□ -1.12
NPM1-212ENST00000524204 AFMP43652 599 aa8.03□□□□□ -1.12
NPM1-212ENST00000524204 SRPK2P78362 688 aaKnown RBP8.03□□□□□ -1.12
NPM1-212ENST00000524204 IKZF1Q13422 519 aa8.03□□□□□ -1.12
NPM1-212ENST00000524204 ZFYVE28Q9HCC9 887 aa8.03□□□□□ -1.12
NPM1-212ENST00000524204 SNX11Q9Y5W9 270 aa8.03□□□□□ -1.12
NPM1-212ENST00000524204 FAM214BQ7L5A3 538 aa8.02□□□□□ -1.13
NPM1-212ENST00000524204 PIDD1Q9HB75 910 aa8.02□□□□□ -1.13
NPM1-212ENST00000524204 TTLL4Q14679 1199 aa8.01□□□□□ -1.13
NPM1-212ENST00000524204 DIRC2Q96SL1 478 aa8.01□□□□□ -1.13
NPM1-212ENST00000524204 KRTAP9-8Q9BYQ0 159 aa8.01□□□□□ -1.13
NPM1-212ENST00000524204 CCDC86Q9H6F5 360 aaKnown RBP8.01□□□□□ -1.13
NPM1-212ENST00000524204 LIN7BQ9HAP6 207 aa8.01□□□□□ -1.13
NPM1-212ENST00000524204 FBXO15Q8NCQ5 510 aaPredicted RBP8□□□□□ -1.13
NPM1-212ENST00000524204 KIRREL1Q96J84 757 aa8□□□□□ -1.13
NPM1-212ENST00000524204 ZC3H12CQ9C0D7 883 aaKnown RBP8□□□□□ -1.13
NPM1-212ENST00000524204 CD320Q9NPF0 282 aa8□□□□□ -1.13
NPM1-212ENST00000524204 C19orf73Q9NVV2 129 aa8□□□□□ -1.13
NPM1-212ENST00000524204 PCDHGC5Q9Y5F6 944 aa8□□□□□ -1.13
NPM1-212ENST00000524204 ZNF862O60290 1169 aa7.99□□□□□ -1.13
NPM1-212ENST00000524204 RNGTTO60942 597 aaKnown RBP7.99□□□□□ -1.13
NPM1-212ENST00000524204 HCLS1P14317 486 aaPredicted RBP7.99□□□□□ -1.13
NPM1-212ENST00000524204 ID3Q02535 119 aa7.99□□□□□ -1.13
NPM1-212ENST00000524204 KCNA10Q16322 511 aa7.99□□□□□ -1.13
NPM1-212ENST00000524204 TMEM67Q5HYA8 995 aa7.99□□□□□ -1.13
NPM1-212ENST00000524204 SPACA3Q8IXA5 215 aa7.99□□□□□ -1.13
NPM1-212ENST00000524204 TOP6BLQ8N6T0 577 aa7.99□□□□□ -1.13
NPM1-212ENST00000524204 ASB11Q8WXH4 323 aa7.99□□□□□ -1.13
NPM1-212ENST00000524204 TRAIPQ9BWF2 469 aa7.99□□□□□ -1.13
NPM1-212ENST00000524204 ATXN3LQ9H3M9 355 aa7.99□□□□□ -1.13
NPM1-212ENST00000524204 ZNF576Q9H609 170 aa7.99□□□□□ -1.13
NPM1-212ENST00000524204 NSUN3Q9H649 340 aaKnown RBP7.99□□□□□ -1.13
NPM1-212ENST00000524204 ATP2B4P23634 1241 aa7.98□□□□□ -1.13
NPM1-212ENST00000524204 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.97□□□□□ -1.13
NPM1-212ENST00000524204 NEFMP07197 916 aa7.97□□□□□ -1.13
NPM1-212ENST00000524204 MTMR3Q13615 1198 aa7.97□□□□□ -1.13
NPM1-212ENST00000524204 NKPD1Q17RQ9 610 aa7.97□□□□□ -1.13
NPM1-212ENST00000524204 ATG14Q6ZNE5 492 aa7.97□□□□□ -1.13
NPM1-212ENST00000524204 CYFIP1Q7L576 1253 aa7.97□□□□□ -1.13
NPM1-212ENST00000524204 PCOLCE2Q9UKZ9 415 aa7.97□□□□□ -1.13
NPM1-212ENST00000524204 ZNF777Q9ULD5 760 aaPredicted RBP7.97□□□□□ -1.13
NPM1-212ENST00000524204 PITPNM2Q9BZ72 1349 aa7.97□□□□□ -1.13
NPM1-212ENST00000524204 ATG7O95352 703 aa7.96□□□□□ -1.14
NPM1-212ENST00000524204 TMEM253P0C7T8 217 aa7.96□□□□□ -1.14
NPM1-212ENST00000524204 AEBP1Q8IUX7 1158 aa7.96□□□□□ -1.14
NPM1-212ENST00000524204 DDX54Q8TDD1 881 aaKnown RBP7.96□□□□□ -1.14
NPM1-212ENST00000524204 RELTQ969Z4 430 aa7.96□□□□□ -1.14
NPM1-212ENST00000524204 KIF4BQ2VIQ3 1234 aa7.95□□□□□ -1.14
NPM1-212ENST00000524204 GALNT12Q8IXK2 581 aa7.95□□□□□ -1.14
NPM1-212ENST00000524204 CCDC97Q96F63 343 aaPredicted RBP7.95□□□□□ -1.14
NPM1-212ENST00000524204 SLFN14P0C7P3 912 aa7.94□□□□□ -1.14
NPM1-212ENST00000524204 EHHADHQ08426 723 aa7.94□□□□□ -1.14
NPM1-212ENST00000524204 AP3B2Q13367 1082 aa7.94□□□□□ -1.14
NPM1-212ENST00000524204 CIAPIN1Q6FI81 312 aa7.94□□□□□ -1.14
NPM1-212ENST00000524204 ISL2Q96A47 359 aa7.94□□□□□ -1.14
NPM1-212ENST00000524204 SERPINA10Q9UK55 444 aa7.94□□□□□ -1.14
NPM1-212ENST00000524204 ETV2O00321 342 aaPredicted RBP7.93□□□□□ -1.14
NPM1-212ENST00000524204 FZD6O60353 706 aa7.93□□□□□ -1.14
NPM1-212ENST00000524204 MED14OSP0DP75 135 aa7.93□□□□□ -1.14
NPM1-212ENST00000524204 ITPKAP23677 461 aa7.93□□□□□ -1.14
NPM1-212ENST00000524204 ZNF157P51786 506 aaPredicted RBP7.93□□□□□ -1.14
NPM1-212ENST00000524204 TMCO4Q5TGY1 634 aa7.93□□□□□ -1.14
NPM1-212ENST00000524204 GTF3C2Q8WUA4 911 aaPredicted RBP7.93□□□□□ -1.14
NPM1-212ENST00000524204 SMG5Q9UPR3 1016 aaKnown RBP7.93□□□□□ -1.14
NPM1-212ENST00000524204 AAMPQ13685 434 aa7.92□□□□□ -1.14
NPM1-212ENST00000524204 USPL1Q5W0Q7 1092 aa7.92□□□□□ -1.14
NPM1-212ENST00000524204 ALKBH2Q6NS38 261 aa7.92□□□□□ -1.14
NPM1-212ENST00000524204 CARS2Q9HA77 564 aaKnown RBP7.92□□□□□ -1.14
NPM1-212ENST00000524204 SHROOM4Q9ULL8 1493 aa7.92□□□□□ -1.14
NPM1-212ENST00000524204 KRTAP10-2P60368 255 aa7.91□□□□□ -1.14
NPM1-212ENST00000524204 IGF2BP3O00425 579 aaKnown RBP eCLIP7.9□□□□□ -1.14
NPM1-212ENST00000524204 FOXD2O60548 495 aaPredicted RBP7.9□□□□□ -1.14
NPM1-212ENST00000524204 FAAP100Q0VG06 881 aa7.9□□□□□ -1.14
NPM1-212ENST00000524204 KIAA0319Q5VV43 1072 aa7.9□□□□□ -1.14
NPM1-212ENST00000524204 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.9□□□□□ -1.14
NPM1-212ENST00000524204 GJD3Q8N144 294 aa7.9□□□□□ -1.14
NPM1-212ENST00000524204 CSRNP1Q96S65 589 aa7.9□□□□□ -1.14
NPM1-212ENST00000524204 DCP1AQ9NPI6 582 aaPredicted RBP7.9□□□□□ -1.14
NPM1-212ENST00000524204 CCDC87Q9NVE4 849 aa7.9□□□□□ -1.14
NPM1-212ENST00000524204 A0A0G2JLL6 359 aaPredicted RBP7.89□□□□□ -1.15
NPM1-212ENST00000524204 TCAF2A6NFQ2 919 aa7.89□□□□□ -1.15
NPM1-212ENST00000524204 NUAK1O60285 661 aa7.89□□□□□ -1.15
NPM1-212ENST00000524204 NPR3P17342 541 aa7.89□□□□□ -1.15
NPM1-212ENST00000524204 GDNFP39905 211 aa7.89□□□□□ -1.15
NPM1-212ENST00000524204 USP5P45974 858 aa7.89□□□□□ -1.15
NPM1-212ENST00000524204 LINC00310P59036 64 aa7.89□□□□□ -1.15
NPM1-212ENST00000524204 PARD6AQ9NPB6 346 aa7.89□□□□□ -1.15
NPM1-212ENST00000524204 GLDCP23378 1020 aa7.88□□□□□ -1.15
NPM1-212ENST00000524204 IRF2BPLQ9H1B7 796 aa7.88□□□□□ -1.15
NPM1-212ENST00000524204 SSU72Q9NP77 194 aaKnown RBP7.88□□□□□ -1.15
NPM1-212ENST00000524204 GTF2IRD1Q9UHL9 959 aa7.88□□□□□ -1.15
NPM1-212ENST00000524204 GSTP1P09211 210 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms