RNA–Protein interactions for RNA: ENST00000522887.1

EIF3E-216, Transcript of eukaryotic translation initiation factor 3 subunit E, human

TSL 4

Gene EIF3E, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF3E-216	ENST00000522887	ANKRD30B	Q9BXX2	1392 aa		8.79	□□□□□ -1
EIF3E-216	ENST00000522887	CHRNA4	P43681	627 aa		8.79	□□□□□ -1
EIF3E-216	ENST00000522887	ENOX2	Q16206	610 aa	Known RBP	8.79	□□□□□ -1
EIF3E-216	ENST00000522887	TMCO4	Q5TGY1	634 aa		8.79	□□□□□ -1
EIF3E-216	ENST00000522887	MAP4K3	Q8IVH8	894 aa		8.79	□□□□□ -1
EIF3E-216	ENST00000522887	KRTAP4-12	Q9BQ66	201 aa		8.79	□□□□□ -1
EIF3E-216	ENST00000522887	PBX4	Q9BYU1	374 aa		8.79	□□□□□ -1
EIF3E-216	ENST00000522887	JPH1	Q9HDC5	661 aa	Predicted RBP	8.79	□□□□□ -1
EIF3E-216	ENST00000522887	ZFP64	Q9NPA5	681 aa		8.79	□□□□□ -1
EIF3E-216	ENST00000522887	SPATA31A6	Q5VVP1	1343 aa		8.79	□□□□□ -1
EIF3E-216	ENST00000522887	DIP2A	Q14689	1571 aa		8.78	□□□□□ -1
EIF3E-216	ENST00000522887	MYO5B	Q9ULV0	1848 aa		8.78	□□□□□ -1
EIF3E-216	ENST00000522887	SPHKAP	Q2M3C7	1700 aa		8.78	□□□□□ -1
EIF3E-216	ENST00000522887	EIF1AY	O14602	144 aa	Known RBP	8.78	□□□□□ -1
EIF3E-216	ENST00000522887	EREG	O14944	169 aa		8.78	□□□□□ -1
EIF3E-216	ENST00000522887	RXRB	P28702	533 aa		8.78	□□□□□ -1
EIF3E-216	ENST00000522887	GATA4	P43694	442 aa		8.78	□□□□□ -1
EIF3E-216	ENST00000522887	ALG1L	Q6GMV1	187 aa		8.78	□□□□□ -1
EIF3E-216	ENST00000522887	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	8.78	□□□□□ -1
EIF3E-216	ENST00000522887	TMEM102	Q8N9M5	508 aa	Predicted RBP	8.78	□□□□□ -1
EIF3E-216	ENST00000522887	NIF3L1	Q9GZT8	377 aa		8.78	□□□□□ -1
EIF3E-216	ENST00000522887	SMG9	Q9H0W8	520 aa	Known RBP	8.78	□□□□□ -1
EIF3E-216	ENST00000522887	RGS17	Q9UGC6	210 aa	Predicted RBP	8.78	□□□□□ -1
EIF3E-216	ENST00000522887	TRAK1	Q9UPV9	953 aa		8.78	□□□□□ -1
EIF3E-216	ENST00000522887	CLTCL1	P53675	1640 aa		8.78	□□□□□ -1
EIF3E-216	ENST00000522887	ALK	Q9UM73	1620 aa		8.78	□□□□□ -1
EIF3E-216	ENST00000522887	ROBO1	Q9Y6N7	1651 aa		8.78	□□□□□ -1
EIF3E-216	ENST00000522887	DHX57	Q6P158	1386 aa	Known RBP	8.77	□□□□□ -1.01
EIF3E-216	ENST00000522887	ROBO2	Q9HCK4	1378 aa		8.77	□□□□□ -1.01
EIF3E-216	ENST00000522887	FAM177B	A6PVY3	158 aa		8.77	□□□□□ -1.01
EIF3E-216	ENST00000522887	CYP2E1	P05181	493 aa	Predicted RBP	8.77	□□□□□ -1.01
EIF3E-216	ENST00000522887	NID1	P14543	1247 aa		8.77	□□□□□ -1.01
EIF3E-216	ENST00000522887	AFF1	P51825	1210 aa	Known RBP	8.77	□□□□□ -1.01
EIF3E-216	ENST00000522887	ATP2B2	Q01814	1243 aa		8.77	□□□□□ -1.01
EIF3E-216	ENST00000522887	MLLT1	Q03111	559 aa	Predicted RBP	8.77	□□□□□ -1.01
EIF3E-216	ENST00000522887	FRMD6	Q96NE9	622 aa		8.77	□□□□□ -1.01
EIF3E-216	ENST00000522887	NWD1	Q149M9	1564 aa		8.77	□□□□□ -1.01
EIF3E-216	ENST00000522887	ITGB7	P26010	798 aa		8.76	□□□□□ -1.01
EIF3E-216	ENST00000522887	GRIK5	Q16478	980 aa		8.76	□□□□□ -1.01
EIF3E-216	ENST00000522887	COL13A1	Q5TAT6	717 aa	Predicted RBP	8.76	□□□□□ -1.01
EIF3E-216	ENST00000522887	KIAA0319	Q5VV43	1072 aa		8.76	□□□□□ -1.01
EIF3E-216	ENST00000522887	PRAM1	Q96QH2	718 aa		8.76	□□□□□ -1.01
EIF3E-216	ENST00000522887	HIRIP3	Q9BW71	556 aa	Predicted RBP	8.76	□□□□□ -1.01
EIF3E-216	ENST00000522887	BHLHE41	Q9C0J9	482 aa	Predicted RBP	8.76	□□□□□ -1.01
EIF3E-216	ENST00000522887	DZANK1	Q9NVP4	752 aa		8.76	□□□□□ -1.01
EIF3E-216	ENST00000522887	KANSL3	Q9P2N6	904 aa		8.76	□□□□□ -1.01
EIF3E-216	ENST00000522887	NEXMIF	Q5QGS0	1516 aa		8.75	□□□□□ -1.01
EIF3E-216	ENST00000522887	ADGRL3	Q9HAR2	1447 aa		8.75	□□□□□ -1.01
EIF3E-216	ENST00000522887	GIPC1	O14908	333 aa		8.75	□□□□□ -1.01
EIF3E-216	ENST00000522887	PTPRA	P18433	802 aa		8.75	□□□□□ -1.01
EIF3E-216	ENST00000522887	COL9A3	Q14050	684 aa	Predicted RBP	8.75	□□□□□ -1.01
EIF3E-216	ENST00000522887	ADAM19	Q9H013	955 aa		8.75	□□□□□ -1.01
EIF3E-216	ENST00000522887	ZFYVE1	Q9HBF4	777 aa		8.75	□□□□□ -1.01
EIF3E-216	ENST00000522887	AFF2	P51816	1311 aa		8.75	□□□□□ -1.01
EIF3E-216	ENST00000522887	PHLPP1	O60346	1717 aa		8.74	□□□□□ -1.01
EIF3E-216	ENST00000522887	SETBP1	Q9Y6X0	1596 aa		8.74	□□□□□ -1.01
EIF3E-216	ENST00000522887		J3QW42	95 aa		8.74	□□□□□ -1.01
EIF3E-216	ENST00000522887	PDE2A	O00408	941 aa	Predicted RBP	8.74	□□□□□ -1.01
EIF3E-216	ENST00000522887	ORC1	Q13415	861 aa		8.74	□□□□□ -1.01
EIF3E-216	ENST00000522887	MSL1	Q68DK7	614 aa		8.74	□□□□□ -1.01
EIF3E-216	ENST00000522887	PRPF40B	Q6NWY9	871 aa	Known RBP	8.74	□□□□□ -1.01
EIF3E-216	ENST00000522887	HFE2	Q6ZVN8	426 aa		8.74	□□□□□ -1.01
EIF3E-216	ENST00000522887	KRT28	Q7Z3Y7	464 aa		8.74	□□□□□ -1.01
EIF3E-216	ENST00000522887	WFDC8	Q8IUA0	241 aa		8.74	□□□□□ -1.01
EIF3E-216	ENST00000522887	PMFBP1	Q8TBY8	1022 aa		8.74	□□□□□ -1.01
EIF3E-216	ENST00000522887	WNT8B	Q93098	351 aa		8.74	□□□□□ -1.01
EIF3E-216	ENST00000522887	CCDC74A	Q96AQ1	378 aa		8.74	□□□□□ -1.01
EIF3E-216	ENST00000522887	SRCIN1	Q9C0H9	1055 aa		8.74	□□□□□ -1.01
EIF3E-216	ENST00000522887	C14orf93	Q9H972	538 aa	Known RBP	8.74	□□□□□ -1.01
EIF3E-216	ENST00000522887	CCDC9	Q9Y3X0	531 aa	Known RBP	8.74	□□□□□ -1.01
EIF3E-216	ENST00000522887	NPHP3	Q7Z494	1330 aa		8.74	□□□□□ -1.01
EIF3E-216	ENST00000522887	LRPPRC	P42704	1394 aa	Known RBP	8.73	□□□□□ -1.01
EIF3E-216	ENST00000522887	CHD2	O14647	1828 aa	Known RBP	8.73	□□□□□ -1.01
EIF3E-216	ENST00000522887	KIF1B	O60333	1816 aa		8.73	□□□□□ -1.01
EIF3E-216	ENST00000522887	DCC	P43146	1447 aa		8.73	□□□□□ -1.01
EIF3E-216	ENST00000522887	MST1R	Q04912	1400 aa		8.73	□□□□□ -1.01
EIF3E-216	ENST00000522887	C1orf167	Q5SNV9	1468 aa		8.73	□□□□□ -1.01
EIF3E-216	ENST00000522887	ANKRD33B	A6NCL7	494 aa		8.73	□□□□□ -1.01
EIF3E-216	ENST00000522887	RAC1	P63000	192 aa		8.73	□□□□□ -1.01
EIF3E-216	ENST00000522887	PTPN12	Q05209	780 aa	Known RBP	8.73	□□□□□ -1.01
EIF3E-216	ENST00000522887	PRRT3	Q5FWE3	981 aa		8.73	□□□□□ -1.01
EIF3E-216	ENST00000522887	ARTN	Q5T4W7	220 aa		8.73	□□□□□ -1.01
EIF3E-216	ENST00000522887	NUDT8	Q8WV74	236 aa		8.73	□□□□□ -1.01
EIF3E-216	ENST00000522887	OSMR	Q99650	979 aa		8.73	□□□□□ -1.01
EIF3E-216	ENST00000522887	RASSF4	Q9H2L5	321 aa		8.73	□□□□□ -1.01
EIF3E-216	ENST00000522887	USP21	Q9UK80	565 aa		8.73	□□□□□ -1.01
EIF3E-216	ENST00000522887	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	8.72	□□□□□ -1.01
EIF3E-216	ENST00000522887	PNMA6F	A0A0J9YX94	578 aa		8.72	□□□□□ -1.01
EIF3E-216	ENST00000522887	NFKBIE	O00221	500 aa		8.72	□□□□□ -1.01
EIF3E-216	ENST00000522887	SPATA31C1	P0DKV0	1188 aa		8.72	□□□□□ -1.01
EIF3E-216	ENST00000522887	PEAR1	Q5VY43	1037 aa	Predicted RBP	8.72	□□□□□ -1.01
EIF3E-216	ENST00000522887	NPAS4	Q8IUM7	802 aa		8.72	□□□□□ -1.01
EIF3E-216	ENST00000522887	TRIM11	Q96F44	468 aa		8.72	□□□□□ -1.01
EIF3E-216	ENST00000522887	ZKSCAN3	Q9BRR0	538 aa		8.72	□□□□□ -1.01
EIF3E-216	ENST00000522887	NLRP2	Q9NX02	1062 aa		8.72	□□□□□ -1.01
EIF3E-216	ENST00000522887	XIRP1	Q702N8	1843 aa	Known RBP	8.72	□□□□□ -1.01
EIF3E-216	ENST00000522887	PLEKHH1	Q9ULM0	1364 aa		8.72	□□□□□ -1.01
EIF3E-216	ENST00000522887	ASXL1	Q8IXJ9	1541 aa		8.71	□□□□□ -1.01
EIF3E-216	ENST00000522887	XRCC5	P13010	732 aa	Known RBP	8.71	□□□□□ -1.02
EIF3E-216	ENST00000522887	CDC27	P30260	824 aa		8.71	□□□□□ -1.02

Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms