RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 U2AF1Q01081 240 aaKnown RBP eCLIP5.02□□□□□ -1.619e-9■■■■■ 30
PVT1-211ENST00000521600 USPL1Q5W0Q7 1092 aa5.02□□□□□ -1.61
PVT1-211ENST00000521600 CIAPIN1Q6FI81 312 aa5.02□□□□□ -1.61
PVT1-211ENST00000521600 TAS1R3Q7RTX0 852 aa5.02□□□□□ -1.61
PVT1-211ENST00000521600 SCG3Q8WXD2 468 aaKnown RBP5.02□□□□□ -1.61
PVT1-211ENST00000521600 PURBQ96QR8 312 aaKnown RBP5.02□□□□□ -1.61
PVT1-211ENST00000521600 TAOK3Q9H2K8 898 aa5.02□□□□□ -1.61
PVT1-211ENST00000521600 ZFAND3Q9H8U3 227 aa5.02□□□□□ -1.61
PVT1-211ENST00000521600 HACL1Q9UJ83 578 aa5.02□□□□□ -1.61
PVT1-211ENST00000521600 COL3A1P02461 1466 aaPredicted RBP5.01□□□□□ -1.61
PVT1-211ENST00000521600 IL16Q14005 1332 aa5.01□□□□□ -1.61
PVT1-211ENST00000521600 SPTBN5Q9NRC6 3674 aaKnown RBP5.01□□□□□ -1.61
PVT1-211ENST00000521600 SOWAHDA6NJG2 315 aa5.01□□□□□ -1.61
PVT1-211ENST00000521600 CA12O43570 354 aa5.01□□□□□ -1.61
PVT1-211ENST00000521600 DIAPH1O60610 1272 aaKnown RBP5.01□□□□□ -1.61
PVT1-211ENST00000521600 IL2RAP01589 272 aa5.01□□□□□ -1.61
PVT1-211ENST00000521600 SERPINB2P05120 415 aa5.01□□□□□ -1.61
PVT1-211ENST00000521600 IGFBP4P22692 258 aa5.01□□□□□ -1.61
PVT1-211ENST00000521600 MAP2K2P36507 400 aa5.01□□□□□ -1.61
PVT1-211ENST00000521600 EPHA4P54764 986 aa5.01□□□□□ -1.61
PVT1-211ENST00000521600 CALD1Q05682 793 aaKnown RBP5.01□□□□□ -1.61
PVT1-211ENST00000521600 ZNF211Q13398 564 aaPredicted RBP5.01□□□□□ -1.61
PVT1-211ENST00000521600 TBCELQ5QJ74 424 aa5.01□□□□□ -1.61
PVT1-211ENST00000521600 INTS5Q6P9B9 1019 aaKnown RBP5.01□□□□□ -1.61
PVT1-211ENST00000521600 CAPN12Q6ZSI9 719 aa5.01□□□□□ -1.61
PVT1-211ENST00000521600 KDF1Q8NAX2 398 aaPredicted RBP5.01□□□□□ -1.61
PVT1-211ENST00000521600 RGS22Q8NE09 1264 aa5.01□□□□□ -1.61
PVT1-211ENST00000521600 GCC1Q96CN9 775 aa5.01□□□□□ -1.61
PVT1-211ENST00000521600 AGBL1Q96MI9 1066 aa5.01□□□□□ -1.61
PVT1-211ENST00000521600 GGNBP2Q9H3C7 697 aa5.01□□□□□ -1.61
PVT1-211ENST00000521600 ANO2Q9NQ90 1003 aa5.01□□□□□ -1.61
PVT1-211ENST00000521600 SEPT3Q9UH03 358 aa5.01□□□□□ -1.61
PVT1-211ENST00000521600 EYSQ5T1H1 3165 aa5.01□□□□□ -1.61
PVT1-211ENST00000521600 UBR2Q8IWV8 1755 aa5.01□□□□□ -1.61
PVT1-211ENST00000521600 SOS1Q07889 1333 aaPredicted RBP5□□□□□ -1.61
PVT1-211ENST00000521600 A0A1W2PRU2 124 aa5□□□□□ -1.61
PVT1-211ENST00000521600 A6NJY4 79 aa5□□□□□ -1.61
PVT1-211ENST00000521600 H0YIN7 160 aa5□□□□□ -1.61
PVT1-211ENST00000521600 U2SURPO15042 1029 aaKnown RBP5□□□□□ -1.61
PVT1-211ENST00000521600 PTCD1O75127 700 aaKnown RBP5□□□□□ -1.61
PVT1-211ENST00000521600 TIMP2P16035 220 aa5□□□□□ -1.61
PVT1-211ENST00000521600 SMPD1P17405 629 aa5□□□□□ -1.61
PVT1-211ENST00000521600 SMTNP53814 917 aa5□□□□□ -1.61
PVT1-211ENST00000521600 RELBQ01201 579 aa5□□□□□ -1.61
PVT1-211ENST00000521600 NAA30Q147X3 362 aaPredicted RBP5□□□□□ -1.61
PVT1-211ENST00000521600 TLR1Q15399 786 aa5□□□□□ -1.61
PVT1-211ENST00000521600 FOXD4L5Q5VV16 416 aaPredicted RBP5□□□□□ -1.61
PVT1-211ENST00000521600 OLFM4Q6UX06 510 aa5□□□□□ -1.61
PVT1-211ENST00000521600 TRIM67Q6ZTA4 783 aa5□□□□□ -1.61
PVT1-211ENST00000521600 Q6ZVU0 165 aa5□□□□□ -1.61
PVT1-211ENST00000521600 SAPCD2Q86UD0 394 aa5□□□□□ -1.61
PVT1-211ENST00000521600 SLC9A9Q8IVB4 645 aa5□□□□□ -1.61
PVT1-211ENST00000521600 FOXD4L4Q8WXT5 416 aaPredicted RBP5□□□□□ -1.61
PVT1-211ENST00000521600 CNKSR1Q969H4 720 aa5□□□□□ -1.61
PVT1-211ENST00000521600 ZNF622Q969S3 477 aaKnown RBP eCLIP5□□□□□ -1.61
PVT1-211ENST00000521600 VTI1AQ96AJ9 217 aa5□□□□□ -1.61
PVT1-211ENST00000521600 XAGE2Q96GT9 111 aa5□□□□□ -1.61
PVT1-211ENST00000521600 KLF16Q9BXK1 252 aaPredicted RBP5□□□□□ -1.61
PVT1-211ENST00000521600 ZNF395Q9H8N7 513 aaPredicted RBP5□□□□□ -1.61
PVT1-211ENST00000521600 TOR4AQ9NXH8 423 aa5□□□□□ -1.61
PVT1-211ENST00000521600 BIN2Q9UBW5 565 aaPredicted RBP5□□□□□ -1.61
PVT1-211ENST00000521600 SPG7Q9UQ90 795 aa5□□□□□ -1.61
PVT1-211ENST00000521600 USP3Q9Y6I4 520 aa5□□□□□ -1.61
PVT1-211ENST00000521600 FLT4P35916 1363 aa5□□□□□ -1.61
PVT1-211ENST00000521600 H3BRB1 525 aa4.99□□□□□ -1.61
PVT1-211ENST00000521600 MEN1O00255 615 aa4.99□□□□□ -1.61
PVT1-211ENST00000521600 PPP1R12BO60237 982 aaPredicted RBP4.99□□□□□ -1.61
PVT1-211ENST00000521600 TMPOP42166 694 aaKnown RBP4.99□□□□□ -1.61
PVT1-211ENST00000521600 PTGIRP43119 386 aa4.99□□□□□ -1.61
PVT1-211ENST00000521600 RARSP54136 660 aaKnown RBP4.99□□□□□ -1.61
PVT1-211ENST00000521600 FOXK2Q01167 660 aa4.99□□□□□ -1.61
PVT1-211ENST00000521600 MTFR1Q15390 333 aa4.99□□□□□ -1.61
PVT1-211ENST00000521600 PRPF40BQ6NWY9 871 aaKnown RBP4.99□□□□□ -1.61
PVT1-211ENST00000521600 NPM2Q86SE8 214 aaKnown RBP4.99□□□□□ -1.61
PVT1-211ENST00000521600 PNMA8AQ86V59 439 aaPredicted RBP4.99□□□□□ -1.61
PVT1-211ENST00000521600 IFNL2Q8IZJ0 200 aa4.99□□□□□ -1.61
PVT1-211ENST00000521600 NBPF15Q8N660 670 aa4.99□□□□□ -1.61
PVT1-211ENST00000521600 GTF3C2Q8WUA4 911 aaPredicted RBP4.99□□□□□ -1.61
PVT1-211ENST00000521600 C7orf43Q8WVR3 580 aa4.99□□□□□ -1.61
PVT1-211ENST00000521600 IPO9Q96P70 1041 aaKnown RBP4.99□□□□□ -1.61
PVT1-211ENST00000521600 ESYT1Q9BSJ8 1104 aa4.99□□□□□ -1.61
PVT1-211ENST00000521600 TUT1Q9H6E5 874 aaKnown RBP4.99□□□□□ -1.61
PVT1-211ENST00000521600 ZNF277Q9NRM2 450 aaPredicted RBP4.99□□□□□ -1.61
PVT1-211ENST00000521600 SCHIP1Q9P0W5 487 aaPredicted RBP4.99□□□□□ -1.61
PVT1-211ENST00000521600 COL15A1P39059 1388 aa4.99□□□□□ -1.61
PVT1-211ENST00000521600 LAMB4A4D0S4 1761 aa4.99□□□□□ -1.61
PVT1-211ENST00000521600 SNED1Q8TER0 1413 aa4.98□□□□□ -1.61
PVT1-211ENST00000521600 FZD9O00144 591 aa4.98□□□□□ -1.61
PVT1-211ENST00000521600 BCAR3O75815 825 aa4.98□□□□□ -1.61
PVT1-211ENST00000521600 EPS15P42566 896 aa4.98□□□□□ -1.61
PVT1-211ENST00000521600 PRR20EP86478 221 aa4.98□□□□□ -1.61
PVT1-211ENST00000521600 PRR20CP86479 221 aa4.98□□□□□ -1.61
PVT1-211ENST00000521600 PRR20DP86480 221 aa4.98□□□□□ -1.61
PVT1-211ENST00000521600 PRR20BP86481 221 aa4.98□□□□□ -1.61
PVT1-211ENST00000521600 PRR20AP86496 221 aa4.98□□□□□ -1.61
PVT1-211ENST00000521600 CENPCQ03188 943 aa4.98□□□□□ -1.61
PVT1-211ENST00000521600 LMOD3Q0VAK6 560 aa4.98□□□□□ -1.61
PVT1-211ENST00000521600 CLN3Q13286 438 aa4.98□□□□□ -1.61
PVT1-211ENST00000521600 MTMR3Q13615 1198 aa4.98□□□□□ -1.61
PVT1-211ENST00000521600 C20orf194Q5TEA3 1177 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms