RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 ZC3H12AQ5D1E8 599 aaKnown RBP5.66□□□□□ -1.5
RNU4-49P-201ENST00000516080 MAP1SQ66K74 1059 aaPredicted RBP5.66□□□□□ -1.5
RNU4-49P-201ENST00000516080 NFXL1Q6ZNB6 911 aa5.66□□□□□ -1.5
RNU4-49P-201ENST00000516080 MISP3Q96FF7 219 aa5.66□□□□□ -1.5
RNU4-49P-201ENST00000516080 ASB16Q96NS5 453 aa5.66□□□□□ -1.5
RNU4-49P-201ENST00000516080 SLC5A6Q9Y289 635 aa5.66□□□□□ -1.5
RNU4-49P-201ENST00000516080 RNF114Q9Y508 228 aa5.66□□□□□ -1.5
RNU4-49P-201ENST00000516080 HCLS1P14317 486 aaPredicted RBP5.65□□□□□ -1.5
RNU4-49P-201ENST00000516080 ZNF252P-AS1Q0IIN9 211 aa5.65□□□□□ -1.5
RNU4-49P-201ENST00000516080 SCARA3Q6AZY7 606 aa5.65□□□□□ -1.5
RNU4-49P-201ENST00000516080 CBLL1Q75N03 491 aa5.65□□□□□ -1.5
RNU4-49P-201ENST00000516080 RNF214Q8ND24 703 aa5.65□□□□□ -1.5
RNU4-49P-201ENST00000516080 STK35Q8TDR2 534 aa5.65□□□□□ -1.5
RNU4-49P-201ENST00000516080 ACSBG1Q96GR2 724 aa5.65□□□□□ -1.5
RNU4-49P-201ENST00000516080 NECAB3Q96P71 396 aaPredicted RBP5.65□□□□□ -1.5
RNU4-49P-201ENST00000516080 CBX8Q9HC52 389 aa5.65□□□□□ -1.5
RNU4-49P-201ENST00000516080 SSU72Q9NP77 194 aaKnown RBP5.65□□□□□ -1.5
RNU4-49P-201ENST00000516080 PAK6Q9NQU5 681 aaPredicted RBP5.65□□□□□ -1.5
RNU4-49P-201ENST00000516080 IVNS1ABPQ9Y6Y0 642 aa5.65□□□□□ -1.5
RNU4-49P-201ENST00000516080 PATL2C9JE40 543 aaKnown RBP5.64□□□□□ -1.51
RNU4-49P-201ENST00000516080 LRRC14Q15048 493 aa5.64□□□□□ -1.51
RNU4-49P-201ENST00000516080 TPTE2Q6XPS3 522 aa5.64□□□□□ -1.51
RNU4-49P-201ENST00000516080 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.64□□□□□ -1.51
RNU4-49P-201ENST00000516080 NETO1Q8TDF5 533 aa5.64□□□□□ -1.51
RNU4-49P-201ENST00000516080 GPBAR1Q8TDU6 330 aa5.64□□□□□ -1.51
RNU4-49P-201ENST00000516080 ANKRD24Q8TF21 1146 aa5.64□□□□□ -1.51
RNU4-49P-201ENST00000516080 BCL7CQ8WUZ0 217 aaPredicted RBP5.64□□□□□ -1.51
RNU4-49P-201ENST00000516080 MKNK2Q9HBH9 465 aa5.64□□□□□ -1.51
RNU4-49P-201ENST00000516080 CACNA2D2Q9NY47 1150 aa5.64□□□□□ -1.51
RNU4-49P-201ENST00000516080 SPG7Q9UQ90 795 aa5.64□□□□□ -1.51
RNU4-49P-201ENST00000516080 TRIM37O94972 964 aa5.63□□□□□ -1.51
RNU4-49P-201ENST00000516080 NEFMP07197 916 aa5.63□□□□□ -1.51
RNU4-49P-201ENST00000516080 ISL2Q96A47 359 aa5.63□□□□□ -1.51
RNU4-49P-201ENST00000516080 DUSP23Q9BVJ7 150 aa5.63□□□□□ -1.51
RNU4-49P-201ENST00000516080 OSBPL7Q9BZF2 842 aa5.63□□□□□ -1.51
RNU4-49P-201ENST00000516080 ENC1O14682 589 aa5.62□□□□□ -1.51
RNU4-49P-201ENST00000516080 JUNBP17275 347 aaPredicted RBP5.62□□□□□ -1.51
RNU4-49P-201ENST00000516080 BMP6P22004 513 aa5.62□□□□□ -1.51
RNU4-49P-201ENST00000516080 LCE3BQ5TA77 95 aa5.62□□□□□ -1.51
RNU4-49P-201ENST00000516080 LLGL2Q6P1M3 1020 aa5.62□□□□□ -1.51
RNU4-49P-201ENST00000516080 ARHGAP27Q6ZUM4 889 aa5.62□□□□□ -1.51
RNU4-49P-201ENST00000516080 ASIC4Q96FT7 647 aa5.62□□□□□ -1.51
RNU4-49P-201ENST00000516080 FRMD6Q96NE9 622 aa5.62□□□□□ -1.51
RNU4-49P-201ENST00000516080 PICK1Q9NRD5 415 aa5.62□□□□□ -1.51
RNU4-49P-201ENST00000516080 VAV3Q9UKW4 847 aa5.62□□□□□ -1.51
RNU4-49P-201ENST00000516080 ITGB5P18084 799 aa5.61□□□□□ -1.51
RNU4-49P-201ENST00000516080 COL19A1Q14993 1142 aa5.61□□□□□ -1.51
RNU4-49P-201ENST00000516080 PLCL1Q15111 1095 aa5.61□□□□□ -1.51
RNU4-49P-201ENST00000516080 IFI16Q16666 785 aaKnown RBP5.61□□□□□ -1.51
RNU4-49P-201ENST00000516080 KRTAP19-1Q8IUB9 90 aa5.61□□□□□ -1.51
RNU4-49P-201ENST00000516080 KRTAP1-3Q8IUG1 177 aa5.61□□□□□ -1.51
RNU4-49P-201ENST00000516080 PLD6Q8N2A8 252 aaKnown RBP5.61□□□□□ -1.51
RNU4-49P-201ENST00000516080 FAM181AQ8N9Y4 354 aa5.61□□□□□ -1.51
RNU4-49P-201ENST00000516080 C12orf49Q9H741 205 aa5.61□□□□□ -1.51
RNU4-49P-201ENST00000516080 FAM8A1Q9UBU6 413 aa5.61□□□□□ -1.51
RNU4-49P-201ENST00000516080 WWC3Q9ULE0 1092 aa5.61□□□□□ -1.51
RNU4-49P-201ENST00000516080 CYP8B1Q9UNU6 501 aa5.61□□□□□ -1.51
RNU4-49P-201ENST00000516080 TMEM265A0A087WTH1 108 aa5.6□□□□□ -1.51
RNU4-49P-201ENST00000516080 FANCGO15287 622 aa5.6□□□□□ -1.51
RNU4-49P-201ENST00000516080 PAGE1O75459 146 aa5.6□□□□□ -1.51
RNU4-49P-201ENST00000516080 LEFTY1O75610 366 aa5.6□□□□□ -1.51
RNU4-49P-201ENST00000516080 YBX3P16989 372 aaKnown RBP eCLIP5.6□□□□□ -1.51
RNU4-49P-201ENST00000516080 PRKCQQ04759 706 aa5.6□□□□□ -1.51
RNU4-49P-201ENST00000516080 SPRED2Q7Z698 418 aa5.6□□□□□ -1.51
RNU4-49P-201ENST00000516080 TOP6BLQ8N6T0 577 aa5.6□□□□□ -1.51
RNU4-49P-201ENST00000516080 KCT2Q8NC54 265 aa5.6□□□□□ -1.51
RNU4-49P-201ENST00000516080 GRIN3AQ8TCU5 1115 aa5.6□□□□□ -1.51
RNU4-49P-201ENST00000516080 SETDB2Q96T68 719 aa5.6□□□□□ -1.51
RNU4-49P-201ENST00000516080 TRAIPQ9BWF2 469 aa5.6□□□□□ -1.51
RNU4-49P-201ENST00000516080 BIN1O00499 593 aa5.59□□□□□ -1.51
RNU4-49P-201ENST00000516080 FBXO24O75426 580 aa5.59□□□□□ -1.51
RNU4-49P-201ENST00000516080 CEACAM5P06731 702 aa5.59□□□□□ -1.51
RNU4-49P-201ENST00000516080 P4HBP07237 508 aaKnown RBP5.59□□□□□ -1.51
RNU4-49P-201ENST00000516080 OXCT1P55809 520 aa5.59□□□□□ -1.51
RNU4-49P-201ENST00000516080 FGD1P98174 961 aa5.59□□□□□ -1.51
RNU4-49P-201ENST00000516080 RING1Q06587 406 aa5.59□□□□□ -1.51
RNU4-49P-201ENST00000516080 PPM1JQ5JR12 505 aa5.59□□□□□ -1.51
RNU4-49P-201ENST00000516080 MPRIPQ6WCQ1 1025 aa5.59□□□□□ -1.51
RNU4-49P-201ENST00000516080 ZNF574Q6ZN55 896 aaPredicted RBP5.59□□□□□ -1.51
RNU4-49P-201ENST00000516080 CDC37L1Q7L3B6 337 aa5.59□□□□□ -1.51
RNU4-49P-201ENST00000516080 GTF2IRD1Q9UHL9 959 aa5.59□□□□□ -1.51
RNU4-49P-201ENST00000516080 PCDHA4Q9UN74 947 aa5.59□□□□□ -1.51
RNU4-49P-201ENST00000516080 DCDC2CA8MYV0 355 aa5.58□□□□□ -1.52
RNU4-49P-201ENST00000516080 IGF2BP3O00425 579 aaKnown RBP eCLIP5.58□□□□□ -1.52
RNU4-49P-201ENST00000516080 LDHBP07195 334 aaKnown RBP5.58□□□□□ -1.52
RNU4-49P-201ENST00000516080 USP17L7P0C7H9 530 aa5.58□□□□□ -1.52
RNU4-49P-201ENST00000516080 FUT4P22083 530 aa5.58□□□□□ -1.52
RNU4-49P-201ENST00000516080 BNIP3Q12983 259 aa5.58□□□□□ -1.52
RNU4-49P-201ENST00000516080 ZNF792Q3KQV3 632 aa5.58□□□□□ -1.52
RNU4-49P-201ENST00000516080 ZBTB37Q5TC79 503 aa5.58□□□□□ -1.52
RNU4-49P-201ENST00000516080 PCNX4Q63HM2 1172 aa5.58□□□□□ -1.52
RNU4-49P-201ENST00000516080 SV2BQ7L1I2 683 aa5.58□□□□□ -1.52
RNU4-49P-201ENST00000516080 C12orf40Q86WS4 652 aa5.58□□□□□ -1.52
RNU4-49P-201ENST00000516080 WFDC3Q8IUB2 231 aa5.58□□□□□ -1.52
RNU4-49P-201ENST00000516080 ELMO3Q96BJ8 720 aa5.58□□□□□ -1.52
RNU4-49P-201ENST00000516080 HRASLS5Q96KN8 279 aa5.58□□□□□ -1.52
RNU4-49P-201ENST00000516080 PRDM10Q9NQV6 1147 aa5.58□□□□□ -1.52
RNU4-49P-201ENST00000516080 SNX11Q9Y5W9 270 aa5.58□□□□□ -1.52
RNU4-49P-201ENST00000516080 CSADQ9Y600 493 aa5.58□□□□□ -1.52
RNU4-49P-201ENST00000516080 CD8BP10966 210 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms