RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 ERVFC1P60507 584 aa2.53□□□□□ -2
SCARNA23-201ENST00000516060 PCDH1Q08174 1060 aa2.53□□□□□ -2
SCARNA23-201ENST00000516060 C16orf46Q6P387 395 aa2.53□□□□□ -2
SCARNA23-201ENST00000516060 XKR5Q6UX68 686 aa2.53□□□□□ -2
SCARNA23-201ENST00000516060 NPAS4Q8IUM7 802 aa2.53□□□□□ -2
SCARNA23-201ENST00000516060 SYT8Q8NBV8 401 aa2.53□□□□□ -2
SCARNA23-201ENST00000516060 PANK1Q8TE04 598 aa2.53□□□□□ -2
SCARNA23-201ENST00000516060 CCDC120Q96HB5 630 aa2.53□□□□□ -2
SCARNA23-201ENST00000516060 FANCD2OSQ96PS1 177 aa2.53□□□□□ -2
SCARNA23-201ENST00000516060 CORO1BQ9BR76 489 aa2.53□□□□□ -2
SCARNA23-201ENST00000516060 BDH2Q9BUT1 245 aa2.53□□□□□ -2
SCARNA23-201ENST00000516060 SLITRK6Q9H5Y7 841 aa2.53□□□□□ -2
SCARNA23-201ENST00000516060 ATP13A1Q9HD20 1204 aa2.53□□□□□ -2
SCARNA23-201ENST00000516060 DISC1Q9NRI5 854 aa2.53□□□□□ -2
SCARNA23-201ENST00000516060 COG6Q9Y2V7 657 aa2.53□□□□□ -2
SCARNA23-201ENST00000516060 ZC3H12DA2A288 527 aaKnown RBP2.52□□□□□ -2.01
SCARNA23-201ENST00000516060 POM121CA8CG34 1229 aa2.52□□□□□ -2.01
SCARNA23-201ENST00000516060 METTL12A8MUP2 240 aa2.52□□□□□ -2.01
SCARNA23-201ENST00000516060 RAC2P15153 192 aa2.52□□□□□ -2.01
SCARNA23-201ENST00000516060 TGM1P22735 817 aa2.52□□□□□ -2.01
SCARNA23-201ENST00000516060 SWI5Q1ZZU3 235 aa2.52□□□□□ -2.01
SCARNA23-201ENST00000516060 HDGFL1Q5TGJ6 251 aa2.52□□□□□ -2.01
SCARNA23-201ENST00000516060 MYLIPQ8WY64 445 aa2.52□□□□□ -2.01
SCARNA23-201ENST00000516060 PMEPA1Q969W9 287 aa2.52□□□□□ -2.01
SCARNA23-201ENST00000516060 DACT3Q96B18 629 aaPredicted RBP2.52□□□□□ -2.01
SCARNA23-201ENST00000516060 NUDT16Q96DE0 195 aaKnown RBP2.52□□□□□ -2.01
SCARNA23-201ENST00000516060 ALPK1Q96QP1 1244 aa2.52□□□□□ -2.01
SCARNA23-201ENST00000516060 ARXQ96QS3 562 aa2.52□□□□□ -2.01
SCARNA23-201ENST00000516060 MRIQ9BWK5 157 aa2.52□□□□□ -2.01
SCARNA23-201ENST00000516060 SGPP1Q9BX95 441 aa2.52□□□□□ -2.01
SCARNA23-201ENST00000516060 SCAND2PQ9GZW5 306 aaPredicted RBP2.52□□□□□ -2.01
SCARNA23-201ENST00000516060 ATXN3LQ9H3M9 355 aa2.52□□□□□ -2.01
SCARNA23-201ENST00000516060 GTF2IRD1Q9UHL9 959 aa2.52□□□□□ -2.01
SCARNA23-201ENST00000516060 PCOLCE2Q9UKZ9 415 aa2.52□□□□□ -2.01
SCARNA23-201ENST00000516060 TEX51A0A1B0GUA7 166 aa2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 SLC22A31A6NKX4 558 aa2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 USP17L15C9J2P7 530 aa2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 USP17L10C9JJH3 530 aa2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 USP17L13C9JLJ4 530 aa2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 USP17L12C9JPN9 530 aa2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 USP17L11C9JVI0 530 aa2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 USP17L21D6R901 530 aa2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 USP17L18D6R9N7 530 aa2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 USP17L22D6RA61 530 aa2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 USP17L17D6RBQ6 530 aa2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 USP17L19D6RCP7 530 aa2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 USP17L20D6RJB6 530 aa2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 SLPIP03973 132 aa2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 USP17L24Q0WX57 530 aa2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 PDE3AQ14432 1141 aa2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 TTLL4Q14679 1199 aa2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 CRB2Q5IJ48 1285 aa2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 KANK4Q5T7N3 995 aaPredicted RBP2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 FRMD5Q7Z6J6 570 aa2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 ZNF605Q86T29 641 aa2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 TTC6Q86TZ1 520 aa2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 WDR89Q96FK6 387 aaPredicted RBP2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 CLEC4MQ9H2X3 399 aaPredicted RBP2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 PALD1Q9ULE6 856 aa2.51□□□□□ -2.01
SCARNA23-201ENST00000516060 FAM196BA6NMK8 535 aa2.5□□□□□ -2.01
SCARNA23-201ENST00000516060 EREGO14944 169 aa2.5□□□□□ -2.01
SCARNA23-201ENST00000516060 PRICKLE3O43900 615 aaPredicted RBP2.5□□□□□ -2.01
SCARNA23-201ENST00000516060 RNGTTO60942 597 aaKnown RBP2.5□□□□□ -2.01
SCARNA23-201ENST00000516060 HPXP02790 462 aa2.5□□□□□ -2.01
SCARNA23-201ENST00000516060 HCLS1P14317 486 aaPredicted RBP2.5□□□□□ -2.01
SCARNA23-201ENST00000516060 LIG1P18858 919 aa2.5□□□□□ -2.01
SCARNA23-201ENST00000516060 PI3P19957 117 aa2.5□□□□□ -2.01
SCARNA23-201ENST00000516060 AFF3P51826 1226 aaKnown RBP2.5□□□□□ -2.01
SCARNA23-201ENST00000516060 ID3Q02535 119 aa2.5□□□□□ -2.01
SCARNA23-201ENST00000516060 HNRNPA0Q13151 305 aaKnown RBP2.5□□□□□ -2.01
SCARNA23-201ENST00000516060 RTP5Q14D33 572 aa2.5□□□□□ -2.01
SCARNA23-201ENST00000516060 PEAR1Q5VY43 1037 aaPredicted RBP2.5□□□□□ -2.01
SCARNA23-201ENST00000516060 IRF2BP1Q8IU81 584 aa2.5□□□□□ -2.01
SCARNA23-201ENST00000516060 SP8Q8IXZ3 490 aa2.5□□□□□ -2.01
SCARNA23-201ENST00000516060 HSPA12BQ96MM6 686 aa2.5□□□□□ -2.01
SCARNA23-201ENST00000516060 RNF32Q9H0A6 362 aa2.5□□□□□ -2.01
SCARNA23-201ENST00000516060 SLAMF8Q9P0V8 285 aa2.5□□□□□ -2.01
SCARNA23-201ENST00000516060 TFIP11Q9UBB9 837 aaKnown RBP2.5□□□□□ -2.01
SCARNA23-201ENST00000516060 CNOT11Q9UKZ1 510 aaKnown RBP2.5□□□□□ -2.01
SCARNA23-201ENST00000516060 PCDHGC5Q9Y5F6 944 aa2.5□□□□□ -2.01
SCARNA23-201ENST00000516060 MAFBQ9Y5Q3 323 aaPredicted RBP2.5□□□□□ -2.01
SCARNA23-201ENST00000516060 DNAJC25-GNG10A0A024R161 153 aa2.49□□□□□ -2.01
SCARNA23-201ENST00000516060 A0A096LPE4 126 aa2.49□□□□□ -2.01
SCARNA23-201ENST00000516060 A0A1W2PPZ6 126 aa2.49□□□□□ -2.01
SCARNA23-201ENST00000516060 GNAT3A8MTJ3 354 aa2.49□□□□□ -2.01
SCARNA23-201ENST00000516060 NEFMP07197 916 aa2.49□□□□□ -2.01
SCARNA23-201ENST00000516060 SLFN14P0C7P3 912 aa2.49□□□□□ -2.01
SCARNA23-201ENST00000516060 EDN3P14138 238 aa2.49□□□□□ -2.01
SCARNA23-201ENST00000516060 TRHRP34981 398 aaPredicted RBP2.49□□□□□ -2.01
SCARNA23-201ENST00000516060 MAGEA10P43363 369 aaPredicted RBP2.49□□□□□ -2.01
SCARNA23-201ENST00000516060 MCM6Q14566 821 aa2.49□□□□□ -2.01
SCARNA23-201ENST00000516060 NEUROD2Q15784 382 aa2.49□□□□□ -2.01
SCARNA23-201ENST00000516060 VMACQ2NL98 169 aa2.49□□□□□ -2.01
SCARNA23-201ENST00000516060 RALGPS1Q5JS13 557 aa2.49□□□□□ -2.01
SCARNA23-201ENST00000516060 TMEM132EQ6IEE7 984 aa2.49□□□□□ -2.01
SCARNA23-201ENST00000516060 ISL2Q96A47 359 aa2.49□□□□□ -2.01
SCARNA23-201ENST00000516060 DNAJC25Q9H1X3 360 aa2.49□□□□□ -2.01
SCARNA23-201ENST00000516060 GGNBP2Q9H3C7 697 aa2.49□□□□□ -2.01
SCARNA23-201ENST00000516060 ZNF552Q9H707 407 aaPredicted RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms