RNA–Protein interactions for RNA: ENST00000515802.5

SH3BP2-229, Transcript of SH3 domain binding protein 2, humanhuman

TSL 2

Gene SH3BP2, Length 2,247 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-229ENST00000515802 RPGRQ92834 1020 aaKnown RBP17.6■□□□□ 0.41
SH3BP2-229ENST00000515802 GJB4Q9NTQ9 266 aa17.6■□□□□ 0.41
SH3BP2-229ENST00000515802 FAM217BQ9NTX9 383 aaPredicted RBP17.6■□□□□ 0.41
SH3BP2-229ENST00000515802 XDHP47989 1333 aa17.6■□□□□ 0.41
SH3BP2-229ENST00000515802 MINDY4BA8MYZ0 360 aa17.59■□□□□ 0.41
SH3BP2-229ENST00000515802 ST5P78524 1137 aa17.59■□□□□ 0.41
SH3BP2-229ENST00000515802 CEBPZQ03701 1054 aaKnown RBP17.59■□□□□ 0.41
SH3BP2-229ENST00000515802 CCDC144CPQ8IYA2 1237 aa17.59■□□□□ 0.41
SH3BP2-229ENST00000515802 ZKSCAN3Q9BRR0 538 aa17.59■□□□□ 0.41
SH3BP2-229ENST00000515802 BRIP1Q9BX63 1249 aa17.59■□□□□ 0.41
SH3BP2-229ENST00000515802 RNF41Q9H4P4 317 aaPredicted RBP17.59■□□□□ 0.41
SH3BP2-229ENST00000515802 TOMM22Q9NS69 142 aa17.59■□□□□ 0.41
SH3BP2-229ENST00000515802 LEMD3Q9Y2U8 911 aa17.59■□□□□ 0.41
SH3BP2-229ENST00000515802 CYP2D7A0A087X1C5 515 aa17.59■□□□□ 0.41
SH3BP2-229ENST00000515802 NTRK3Q16288 839 aa17.59■□□□□ 0.41
SH3BP2-229ENST00000515802 GIMAP6Q6P9H5 292 aa17.59■□□□□ 0.41
SH3BP2-229ENST00000515802 DHX37Q8IY37 1157 aaKnown RBP17.59■□□□□ 0.41
SH3BP2-229ENST00000515802 USP28Q96RU2 1077 aa17.59■□□□□ 0.41
SH3BP2-229ENST00000515802 ANKRD31Q8N7Z5 1873 aa17.59■□□□□ 0.41
SH3BP2-229ENST00000515802 NID2Q14112 1375 aa17.58■□□□□ 0.41
SH3BP2-229ENST00000515802 GPR101Q96P66 508 aaPredicted RBP17.58■□□□□ 0.4
SH3BP2-229ENST00000515802 FUCA2Q9BTY2 467 aa17.58■□□□□ 0.4
SH3BP2-229ENST00000515802 GOLGA6L4A6NEF3 574 aa17.57■□□□□ 0.4
SH3BP2-229ENST00000515802 GOLGA8AA7E2F4 631 aa17.57■□□□□ 0.4
SH3BP2-229ENST00000515802 POLRMTO00411 1230 aaKnown RBP17.57■□□□□ 0.4
SH3BP2-229ENST00000515802 RANBP6O60518 1105 aaKnown RBP17.57■□□□□ 0.4
SH3BP2-229ENST00000515802 PHKBQ93100 1093 aa17.57■□□□□ 0.4
SH3BP2-229ENST00000515802 AIFM3Q96NN9 605 aa17.57■□□□□ 0.4
SH3BP2-229ENST00000515802 AATFQ9NY61 560 aaKnown RBP eCLIP17.57■□□□□ 0.4
SH3BP2-229ENST00000515802 SLC12A7Q9Y666 1083 aa17.57■□□□□ 0.4
SH3BP2-229ENST00000515802 CCDC69A6NI79 296 aa17.57■□□□□ 0.4
SH3BP2-229ENST00000515802 CDKL5O76039 1030 aa17.57■□□□□ 0.4
SH3BP2-229ENST00000515802 GPSM2P81274 684 aa17.57■□□□□ 0.4
SH3BP2-229ENST00000515802 ANP32BQ92688 251 aaKnown RBP17.57■□□□□ 0.4
SH3BP2-229ENST00000515802 RCOR1Q9UKL0 485 aa17.57■□□□□ 0.4
SH3BP2-229ENST00000515802 LTBP1Q14766 1721 aa17.57■□□□□ 0.4
SH3BP2-229ENST00000515802 DLEC1Q9Y238 1755 aa17.57■□□□□ 0.4
SH3BP2-229ENST00000515802 LRRC37AA6NMS7 1700 aa17.56■□□□□ 0.4
SH3BP2-229ENST00000515802 ATL3Q6DD88 541 aa17.56■□□□□ 0.4
SH3BP2-229ENST00000515802 CTR9Q6PD62 1173 aa17.56■□□□□ 0.4
SH3BP2-229ENST00000515802 MTA3Q9BTC8 594 aa17.56■□□□□ 0.4
SH3BP2-229ENST00000515802 PDCL3Q9H2J4 239 aa17.56■□□□□ 0.4
SH3BP2-229ENST00000515802 DACT1Q9NYF0 836 aa17.56■□□□□ 0.4
SH3BP2-229ENST00000515802 EVX2Q03828 476 aa17.56■□□□□ 0.4
SH3BP2-229ENST00000515802 WTAPQ15007 396 aa17.56■□□□□ 0.4
SH3BP2-229ENST00000515802 SART3Q15020 963 aaKnown RBP17.56■□□□□ 0.4
SH3BP2-229ENST00000515802 TDRD7Q8NHU6 1098 aaKnown RBP17.56■□□□□ 0.4
SH3BP2-229ENST00000515802 ZNF396Q96N95 335 aaPredicted RBP17.56■□□□□ 0.4
SH3BP2-229ENST00000515802 KIF28PB7ZC32 967 aa17.55■□□□□ 0.4
SH3BP2-229ENST00000515802 NR1I2O75469 434 aa17.55■□□□□ 0.4
SH3BP2-229ENST00000515802 ZNF827Q17R98 1081 aa17.55■□□□□ 0.4
SH3BP2-229ENST00000515802 C15orf52Q6ZUT6 534 aaKnown RBP17.55■□□□□ 0.4
SH3BP2-229ENST00000515802 BICD2Q8TD16 824 aa17.55■□□□□ 0.4
SH3BP2-229ENST00000515802 PDLIM2Q96JY6 352 aa17.55■□□□□ 0.4
SH3BP2-229ENST00000515802 RBM17Q96I25 401 aaKnown RBP17.55■□□□□ 0.4
SH3BP2-229ENST00000515802 ALG1Q9BT22 464 aa17.55■□□□□ 0.4
SH3BP2-229ENST00000515802 NUP62CLQ9H1M0 184 aa17.55■□□□□ 0.4
SH3BP2-229ENST00000515802 DCP1AQ9NPI6 582 aaPredicted RBP17.55■□□□□ 0.4
SH3BP2-229ENST00000515802 NRXN2Q9P2S2 1712 aa17.54■□□□□ 0.4
SH3BP2-229ENST00000515802 USP17L12C9JPN9 530 aa17.54■□□□□ 0.4
SH3BP2-229ENST00000515802 USP17L21D6R901 530 aa17.54■□□□□ 0.4
SH3BP2-229ENST00000515802 UBE2Q2LH0YL09 131 aa17.54■□□□□ 0.4
SH3BP2-229ENST00000515802 FGRP09769 529 aa17.54■□□□□ 0.4
SH3BP2-229ENST00000515802 HOXA10P31260 410 aaPredicted RBP17.54■□□□□ 0.4
SH3BP2-229ENST00000515802 KIF23Q02241 960 aaPredicted RBP17.54■□□□□ 0.4
SH3BP2-229ENST00000515802 SEC23AQ15436 765 aa17.54■□□□□ 0.4
SH3BP2-229ENST00000515802 CAMK4Q16566 473 aa17.54■□□□□ 0.4
SH3BP2-229ENST00000515802 CPLX2Q6PUV4 134 aaKnown RBP17.54■□□□□ 0.4
SH3BP2-229ENST00000515802 DZIP1Q86YF9 867 aaKnown RBP17.54■□□□□ 0.4
SH3BP2-229ENST00000515802 RGS22Q8NE09 1264 aa17.54■□□□□ 0.4
SH3BP2-229ENST00000515802 ESR2Q92731 530 aa17.54■□□□□ 0.4
SH3BP2-229ENST00000515802 CRNKL1Q9BZJ0 848 aaKnown RBP17.54■□□□□ 0.4
SH3BP2-229ENST00000515802 MYH6P13533 1939 aa17.54■□□□□ 0.4
SH3BP2-229ENST00000515802 ERICH2A1L162 156 aa17.53■□□□□ 0.4
SH3BP2-229ENST00000515802 UFL1O94874 794 aa17.53■□□□□ 0.4
SH3BP2-229ENST00000515802 TNKSO95271 1327 aa17.53■□□□□ 0.4
SH3BP2-229ENST00000515802 POLR3DP05423 398 aaPredicted RBP17.53■□□□□ 0.4
SH3BP2-229ENST00000515802 IARSP41252 1262 aaKnown RBP17.53■□□□□ 0.4
SH3BP2-229ENST00000515802 RBM6P78332 1123 aaKnown RBP17.53■□□□□ 0.4
SH3BP2-229ENST00000515802 GRIK5Q16478 980 aa17.53■□□□□ 0.4
SH3BP2-229ENST00000515802 SPTY2D1Q68D10 685 aaPredicted RBP17.53■□□□□ 0.4
SH3BP2-229ENST00000515802 TMED8Q6PL24 325 aaPredicted RBP17.53■□□□□ 0.4
SH3BP2-229ENST00000515802 ZNF804AQ7Z570 1209 aa17.53■□□□□ 0.4
SH3BP2-229ENST00000515802 UBAC1Q9BSL1 405 aa17.53■□□□□ 0.4
SH3BP2-229ENST00000515802 CDK5RAP2Q96SN8 1893 aa17.53■□□□□ 0.4
SH3BP2-229ENST00000515802 STK36Q9NRP7 1315 aa17.53■□□□□ 0.4
SH3BP2-229ENST00000515802 KLRG2A4D1S0 409 aaPredicted RBP17.53■□□□□ 0.4
SH3BP2-229ENST00000515802 PRDM1O75626 825 aa17.53■□□□□ 0.4
SH3BP2-229ENST00000515802 BRAPQ7Z569 592 aa17.53■□□□□ 0.4
SH3BP2-229ENST00000515802 WDR66Q8TBY9 1149 aa17.53■□□□□ 0.4
SH3BP2-229ENST00000515802 DDX19AQ9NUU7 478 aaKnown RBP17.53■□□□□ 0.4
SH3BP2-229ENST00000515802 LDHBP07195 334 aaKnown RBP17.52■□□□□ 0.4
SH3BP2-229ENST00000515802 MYSM1Q5VVJ2 828 aa17.52■□□□□ 0.4
SH3BP2-229ENST00000515802 SYNE3Q6ZMZ3 975 aa17.52■□□□□ 0.4
SH3BP2-229ENST00000515802 ZNF654Q8IZM8 581 aa17.52■□□□□ 0.4
SH3BP2-229ENST00000515802 CLSTN2Q9H4D0 955 aa17.52■□□□□ 0.4
SH3BP2-229ENST00000515802 ATP8A2Q9NTI2 1148 aa17.52■□□□□ 0.4
SH3BP2-229ENST00000515802 RTEL1Q9NZ71 1219 aa17.52■□□□□ 0.4
SH3BP2-229ENST00000515802 IFNAR1P17181 557 aa17.52■□□□□ 0.39
SH3BP2-229ENST00000515802 MAP3K11Q16584 847 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms