RNA–Protein interactions for RNA: ENST00000515155.1

FAM13A-221, Transcript of family with sequence similarity 13 member A, humanhuman

TSL 4

Gene FAM13A, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM13A-221ENST00000515155 TM6SF1Q9BZW5 370 aa11.09□□□□□ -0.63
FAM13A-221ENST00000515155 OSBPL5Q9H0X9 879 aaPredicted RBP11.09□□□□□ -0.63
FAM13A-221ENST00000515155 DHX36Q9H2U1 1008 aaKnown RBP11.09□□□□□ -0.63
FAM13A-221ENST00000515155 TDRD3Q9H7E2 651 aaKnown RBP11.09□□□□□ -0.63
FAM13A-221ENST00000515155 TMOD2Q9NZR1 351 aa11.09□□□□□ -0.63
FAM13A-221ENST00000515155 ZNF70Q9UC06 446 aaPredicted RBP11.09□□□□□ -0.63
FAM13A-221ENST00000515155 FAM198AQ9UFP1 575 aa11.09□□□□□ -0.63
FAM13A-221ENST00000515155 PCDHAC2Q9Y5I4 1007 aa11.09□□□□□ -0.63
FAM13A-221ENST00000515155 ATRNL1Q5VV63 1379 aa11.08□□□□□ -0.64
FAM13A-221ENST00000515155 MYH2Q9UKX2 1941 aa11.08□□□□□ -0.64
FAM13A-221ENST00000515155 SHTN1A0MZ66 631 aa11.08□□□□□ -0.64
FAM13A-221ENST00000515155 IQCA1LA6NCM1 817 aa11.08□□□□□ -0.64
FAM13A-221ENST00000515155 USP17L12C9JPN9 530 aa11.08□□□□□ -0.64
FAM13A-221ENST00000515155 USP17L21D6R901 530 aa11.08□□□□□ -0.64
FAM13A-221ENST00000515155 PSMA5P28066 241 aa11.08□□□□□ -0.64
FAM13A-221ENST00000515155 EPS15P42566 896 aa11.08□□□□□ -0.64
FAM13A-221ENST00000515155 PPARAQ07869 468 aa11.08□□□□□ -0.64
FAM13A-221ENST00000515155 TNFAIP1Q13829 316 aa11.08□□□□□ -0.64
FAM13A-221ENST00000515155 C12orf60Q5U649 245 aa11.08□□□□□ -0.64
FAM13A-221ENST00000515155 USP50Q70EL3 339 aaPredicted RBP11.08□□□□□ -0.64
FAM13A-221ENST00000515155 AMOTL1Q8IY63 956 aa11.08□□□□□ -0.64
FAM13A-221ENST00000515155 RASEFQ8IZ41 740 aa11.08□□□□□ -0.64
FAM13A-221ENST00000515155 ZC3H15Q8WU90 426 aaKnown RBP11.08□□□□□ -0.64
FAM13A-221ENST00000515155 DDX4Q9NQI0 724 aaKnown RBP11.08□□□□□ -0.64
FAM13A-221ENST00000515155 MCM9Q9NXL9 1143 aa11.08□□□□□ -0.64
FAM13A-221ENST00000515155 PALD1Q9ULE6 856 aa11.08□□□□□ -0.64
FAM13A-221ENST00000515155 SNX14Q9Y5W7 946 aa11.08□□□□□ -0.64
FAM13A-221ENST00000515155 PITPNM2Q9BZ72 1349 aa11.08□□□□□ -0.64
FAM13A-221ENST00000515155 ROBO3Q96MS0 1386 aa11.07□□□□□ -0.64
FAM13A-221ENST00000515155 EGFRP00533 1210 aa11.07□□□□□ -0.64
FAM13A-221ENST00000515155 SLC3A2P08195 630 aaKnown RBP11.07□□□□□ -0.64
FAM13A-221ENST00000515155 HMGB1P09429 215 aaKnown RBP11.07□□□□□ -0.64
FAM13A-221ENST00000515155 NFIAQ12857 509 aa11.07□□□□□ -0.64
FAM13A-221ENST00000515155 RABEP1Q15276 862 aa11.07□□□□□ -0.64
FAM13A-221ENST00000515155 NBPF9Q3BBW0 867 aa11.07□□□□□ -0.64
FAM13A-221ENST00000515155 SAMD7Q7Z3H4 446 aa11.07□□□□□ -0.64
FAM13A-221ENST00000515155 TTC6Q86TZ1 520 aa11.07□□□□□ -0.64
FAM13A-221ENST00000515155 METTL16Q86W50 562 aaKnown RBP11.07□□□□□ -0.64
FAM13A-221ENST00000515155 MAPKAPK5Q8IW41 473 aa11.07□□□□□ -0.64
FAM13A-221ENST00000515155 STAG1Q8WVM7 1258 aa11.07□□□□□ -0.64
FAM13A-221ENST00000515155 FAM151AQ8WW52 585 aa11.07□□□□□ -0.64
FAM13A-221ENST00000515155 NBPF3Q9H094 633 aa11.07□□□□□ -0.64
FAM13A-221ENST00000515155 EHD4Q9H223 541 aa11.07□□□□□ -0.64
FAM13A-221ENST00000515155 RNF41Q9H4P4 317 aaPredicted RBP11.07□□□□□ -0.64
FAM13A-221ENST00000515155 TSHZ2Q9NRE2 1034 aa11.07□□□□□ -0.64
FAM13A-221ENST00000515155 HACL1Q9UJ83 578 aa11.07□□□□□ -0.64
FAM13A-221ENST00000515155 TNNI2P48788 182 aa11.06□□□□□ -0.64
FAM13A-221ENST00000515155 HIRAP54198 1017 aaPredicted RBP11.06□□□□□ -0.64
FAM13A-221ENST00000515155 GABPAQ06546 454 aa11.06□□□□□ -0.64
FAM13A-221ENST00000515155 TBC1D10BQ4KMP7 808 aaPredicted RBP11.06□□□□□ -0.64
FAM13A-221ENST00000515155 AKNAD1Q5T1N1 836 aa11.06□□□□□ -0.64
FAM13A-221ENST00000515155 APOBEC3FQ8IUX4 373 aaKnown RBP11.06□□□□□ -0.64
FAM13A-221ENST00000515155 TRPM4Q8TD43 1214 aa11.06□□□□□ -0.64
FAM13A-221ENST00000515155 CNNM2Q9H8M5 875 aa11.06□□□□□ -0.64
FAM13A-221ENST00000515155 ZNF287Q9HBT7 754 aa11.06□□□□□ -0.64
FAM13A-221ENST00000515155 ZSWIM6Q9HCJ5 1215 aa11.06□□□□□ -0.64
FAM13A-221ENST00000515155 PI4KBQ9UBF8 816 aa11.06□□□□□ -0.64
FAM13A-221ENST00000515155 PGAP2Q9UHJ9 254 aa11.06□□□□□ -0.64
FAM13A-221ENST00000515155 PPP2R3BQ9Y5P8 575 aa11.06□□□□□ -0.64
FAM13A-221ENST00000515155 TIAM2Q8IVF5 1701 aa11.06□□□□□ -0.64
FAM13A-221ENST00000515155 CLRN2A0PK11 232 aa11.05□□□□□ -0.64
FAM13A-221ENST00000515155 POTECB2RU33 542 aa11.05□□□□□ -0.64
FAM13A-221ENST00000515155 E7EWF7 191 aa11.05□□□□□ -0.64
FAM13A-221ENST00000515155 ORC4O43929 436 aa11.05□□□□□ -0.64
FAM13A-221ENST00000515155 POLR3DP05423 398 aaPredicted RBP11.05□□□□□ -0.64
FAM13A-221ENST00000515155 HLA-DOAP06340 250 aa11.05□□□□□ -0.64
FAM13A-221ENST00000515155 EPHX2P34913 555 aa11.05□□□□□ -0.64
FAM13A-221ENST00000515155 PLCD1P51178 756 aa11.05□□□□□ -0.64
FAM13A-221ENST00000515155 MAP3K10Q02779 954 aa11.05□□□□□ -0.64
FAM13A-221ENST00000515155 PICALMQ13492 652 aa11.05□□□□□ -0.64
FAM13A-221ENST00000515155 RBM26Q5T8P6 1007 aaKnown RBP11.05□□□□□ -0.64
FAM13A-221ENST00000515155 C16orf86Q6ZW13 317 aa11.05□□□□□ -0.64
FAM13A-221ENST00000515155 PNMA8AQ86V59 439 aaPredicted RBP11.05□□□□□ -0.64
FAM13A-221ENST00000515155 TBC1D10CQ8IV04 446 aa11.05□□□□□ -0.64
FAM13A-221ENST00000515155 FOXP4Q8IVH2 680 aaPredicted RBP11.05□□□□□ -0.64
FAM13A-221ENST00000515155 FBXL16Q8N461 479 aa11.05□□□□□ -0.64
FAM13A-221ENST00000515155 NEK1Q96PY6 1258 aa11.05□□□□□ -0.64
FAM13A-221ENST00000515155 MTA3Q9BTC8 594 aa11.05□□□□□ -0.64
FAM13A-221ENST00000515155 ALDH8A1Q9H2A2 487 aaPredicted RBP11.05□□□□□ -0.64
FAM13A-221ENST00000515155 TAF1DQ9H5J8 278 aaPredicted RBP11.05□□□□□ -0.64
FAM13A-221ENST00000515155 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.05□□□□□ -0.64
FAM13A-221ENST00000515155 TAF6LQ9Y6J9 622 aa11.05□□□□□ -0.64
FAM13A-221ENST00000515155 WDR19Q8NEZ3 1342 aa11.05□□□□□ -0.64
FAM13A-221ENST00000515155 CNTNAP1P78357 1384 aa11.04□□□□□ -0.64
FAM13A-221ENST00000515155 MINDY4BA8MYZ0 360 aa11.04□□□□□ -0.64
FAM13A-221ENST00000515155 TBC1D12O60347 775 aa11.04□□□□□ -0.64
FAM13A-221ENST00000515155 CACNB3P54284 484 aa11.04□□□□□ -0.64
FAM13A-221ENST00000515155 HAND2P61296 217 aa11.04□□□□□ -0.64
FAM13A-221ENST00000515155 PDE4BQ07343 736 aa11.04□□□□□ -0.64
FAM13A-221ENST00000515155 TRDNQ13061 729 aa11.04□□□□□ -0.64
FAM13A-221ENST00000515155 ADCK5Q3MIX3 580 aa11.04□□□□□ -0.64
FAM13A-221ENST00000515155 MFSD6Q6ZSS7 791 aa11.04□□□□□ -0.64
FAM13A-221ENST00000515155 STOX1Q6ZVD7 989 aa11.04□□□□□ -0.64
FAM13A-221ENST00000515155 SH3BP5LQ7L8J4 393 aa11.04□□□□□ -0.64
FAM13A-221ENST00000515155 ZFPM1Q8IX07 1006 aa11.04□□□□□ -0.64
FAM13A-221ENST00000515155 NCOA7Q8NI08 942 aa11.04□□□□□ -0.64
FAM13A-221ENST00000515155 KRT23Q9C075 422 aa11.04□□□□□ -0.64
FAM13A-221ENST00000515155 SWAP70Q9UH65 585 aa11.04□□□□□ -0.64
FAM13A-221ENST00000515155 SERPINB13Q9UIV8 391 aa11.04□□□□□ -0.64
FAM13A-221ENST00000515155 CYP2D7A0A087X1C5 515 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms