RNA–Protein interactions for RNA: ENST00000514962.5

CALCOCO2-224, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 765 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-224ENST00000514962 BCAMP50895 628 aa7.31□□□□□ -1.24
CALCOCO2-224ENST00000514962 GYS2P54840 703 aa7.31□□□□□ -1.24
CALCOCO2-224ENST00000514962 SF3B2Q13435 895 aaKnown RBP7.31□□□□□ -1.24
CALCOCO2-224ENST00000514962 GNL2Q13823 731 aaKnown RBP7.31□□□□□ -1.24
CALCOCO2-224ENST00000514962 NCAPHQ15003 741 aa7.31□□□□□ -1.24
CALCOCO2-224ENST00000514962 NCAPD2Q15021 1401 aa7.31□□□□□ -1.24
CALCOCO2-224ENST00000514962 SF3A1Q15459 793 aaKnown RBP7.31□□□□□ -1.24
CALCOCO2-224ENST00000514962 HSP90B2PQ58FF3 399 aa7.31□□□□□ -1.24
CALCOCO2-224ENST00000514962 BEND6Q5SZJ8 279 aaPredicted RBP7.31□□□□□ -1.24
CALCOCO2-224ENST00000514962 OVOS2Q6IE36 1432 aa7.31□□□□□ -1.24
CALCOCO2-224ENST00000514962 SRGAP1Q7Z6B7 1085 aa7.31□□□□□ -1.24
CALCOCO2-224ENST00000514962 TTC13Q8NBP0 860 aa7.31□□□□□ -1.24
CALCOCO2-224ENST00000514962 CTCFLQ8NI51 663 aaPredicted RBP7.31□□□□□ -1.24
CALCOCO2-224ENST00000514962 KCNG4Q8TDN1 519 aa7.31□□□□□ -1.24
CALCOCO2-224ENST00000514962 KIFC2Q96AC6 838 aa7.31□□□□□ -1.24
CALCOCO2-224ENST00000514962 PBXIP1Q96AQ6 731 aa7.31□□□□□ -1.24
CALCOCO2-224ENST00000514962 CCDC34Q96HJ3 373 aa7.31□□□□□ -1.24
CALCOCO2-224ENST00000514962 PLCD4Q9BRC7 762 aa7.31□□□□□ -1.24
CALCOCO2-224ENST00000514962 SDF4Q9BRK5 362 aa7.31□□□□□ -1.24
CALCOCO2-224ENST00000514962 VIPAS39Q9H9C1 493 aa7.31□□□□□ -1.24
CALCOCO2-224ENST00000514962 VPS18Q9P253 973 aa7.31□□□□□ -1.24
CALCOCO2-224ENST00000514962 TOPAZ1Q8N9V7 1692 aa7.31□□□□□ -1.24
CALCOCO2-224ENST00000514962 KDRP35968 1356 aa7.31□□□□□ -1.24
CALCOCO2-224ENST00000514962 USP31Q70CQ4 1352 aa7.31□□□□□ -1.24
CALCOCO2-224ENST00000514962 A2ML1A8K2U0 1454 aa7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 MRC1P22897 1456 aa7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 TSPOAP1O95153 1857 aa7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 DIP2CQ9Y2E4 1556 aa7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 SLC3A2P08195 630 aaKnown RBP7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 HOXB7P09629 217 aa7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 CCDC172P0C7W6 258 aa7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 TOP1P11387 765 aaKnown RBP7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 ERCC3P19447 782 aa7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 GNG11P61952 73 aa7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 TBX2Q13207 712 aaPredicted RBP7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 OS9Q13438 667 aaPredicted RBP7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 RRS1Q15050 365 aaKnown RBP7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 AMHR2Q16671 573 aa7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 DNAJC21Q5F1R6 531 aaKnown RBP7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 NUTM2DQ5VT03 806 aaPredicted RBP7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 GGT6Q6P531 493 aa7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 LRRC31Q6UY01 552 aa7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 TADA2BQ86TJ2 420 aa7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 TMEM139Q8IV31 216 aa7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 PARP9Q8IXQ6 854 aa7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 TATDN2Q93075 761 aa7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 PHOX2BQ99453 314 aa7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 DONSONQ9NYP3 566 aa7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 CEP83Q9Y592 693 aa7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 ADGRG1Q9Y653 693 aa7.3□□□□□ -1.24
CALCOCO2-224ENST00000514962 ZC3H4Q9UPT8 1303 aaKnown RBP7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 C3orf80F5H4A9 247 aa7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 FANCGO15287 622 aa7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 JAK2O60674 1132 aa7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 CUTAO60888 179 aa7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 MCM3P25205 808 aa7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 ME1P48163 572 aa7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 AARSP49588 968 aaKnown RBP eCLIP7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 UBASH3AP57075 661 aa7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 CHMP4BP1P59074 171 aa7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 MYL5Q02045 173 aa7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 TRDNQ13061 729 aa7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 DPCR1Q3MIW9 517 aa7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 NUDT18Q6ZVK8 323 aa7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 CEP120Q8N960 986 aa7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 NSUN7Q8NE18 718 aaKnown RBP7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 STAG1Q8WVM7 1258 aa7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 NLRP7Q8WX94 980 aa7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 NEK1Q96PY6 1258 aa7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 USP28Q96RU2 1077 aa7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 PDE11AQ9HCR9 933 aa7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 A1CFQ9NQ94 594 aaKnown RBP7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 TSR3Q9UJK0 312 aaKnown RBP7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 TUBE1Q9UJT0 475 aa7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 CDC23Q9UJX2 597 aa7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 PCDHA7Q9UN72 937 aa7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 L1RE1Q9UN81 338 aa7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 HPS5Q9UPZ3 1129 aa7.29□□□□□ -1.24
CALCOCO2-224ENST00000514962 ATXN2Q99700 1313 aaKnown RBP7.28□□□□□ -1.24
CALCOCO2-224ENST00000514962 TECPR2O15040 1411 aa7.28□□□□□ -1.24
CALCOCO2-224ENST00000514962 SMAPO00193 183 aa7.28□□□□□ -1.24
CALCOCO2-224ENST00000514962 RNF40O75150 1001 aa7.28□□□□□ -1.24
CALCOCO2-224ENST00000514962 TAF5LO75529 589 aa7.28□□□□□ -1.24
CALCOCO2-224ENST00000514962 CMA1P23946 247 aa7.28□□□□□ -1.24
CALCOCO2-224ENST00000514962 ATP6V1AP38606 617 aa7.28□□□□□ -1.24
CALCOCO2-224ENST00000514962 STK3Q13188 491 aa7.28□□□□□ -1.24
CALCOCO2-224ENST00000514962 TTLL12Q14166 644 aaPredicted RBP7.28□□□□□ -1.24
CALCOCO2-224ENST00000514962 STK38Q15208 465 aa7.28□□□□□ -1.24
CALCOCO2-224ENST00000514962 WHAMMP3Q1A5X7 153 aa7.28□□□□□ -1.24
CALCOCO2-224ENST00000514962 MTHFSDQ2M296 383 aaKnown RBP7.28□□□□□ -1.24
CALCOCO2-224ENST00000514962 BRAPQ7Z569 592 aa7.28□□□□□ -1.24
CALCOCO2-224ENST00000514962 METTL3Q86U44 580 aaKnown RBP7.28□□□□□ -1.24
CALCOCO2-224ENST00000514962 ELOA2Q8IYF1 753 aaPredicted RBP7.28□□□□□ -1.24
CALCOCO2-224ENST00000514962 CNNM3Q8NE01 707 aa7.28□□□□□ -1.24
CALCOCO2-224ENST00000514962 AFAP1L1Q8TED9 768 aa7.28□□□□□ -1.24
CALCOCO2-224ENST00000514962 DNAAF4Q8WXU2 420 aa7.28□□□□□ -1.24
CALCOCO2-224ENST00000514962 DHX58Q96C10 678 aa7.28□□□□□ -1.24
CALCOCO2-224ENST00000514962 NUDT16Q96DE0 195 aaKnown RBP7.28□□□□□ -1.24
CALCOCO2-224ENST00000514962 WDR24Q96S15 920 aa7.28□□□□□ -1.24
CALCOCO2-224ENST00000514962 BAG1Q99933 345 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms