RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 APPBP2Q92624 585 aa17.49■□□□□ 0.39
SNF8-212ENST00000514089 SLC10A4Q96EP9 437 aa17.49■□□□□ 0.39
SNF8-212ENST00000514089 TEPSINQ96N21 525 aa17.49■□□□□ 0.39
SNF8-212ENST00000514089 DHX36Q9H2U1 1008 aaKnown RBP17.49■□□□□ 0.39
SNF8-212ENST00000514089 ARMT1Q9H993 441 aa17.49■□□□□ 0.39
SNF8-212ENST00000514089 SAP30BPQ9UHR5 308 aaKnown RBP17.49■□□□□ 0.39
SNF8-212ENST00000514089 CNTNAP1P78357 1384 aa17.49■□□□□ 0.39
SNF8-212ENST00000514089 NPM3O75607 178 aaKnown RBP17.48■□□□□ 0.39
SNF8-212ENST00000514089 APPP05067 770 aa17.48■□□□□ 0.39
SNF8-212ENST00000514089 POLR3DP05423 398 aaPredicted RBP17.48■□□□□ 0.39
SNF8-212ENST00000514089 HLA-DOAP06340 250 aa17.48■□□□□ 0.39
SNF8-212ENST00000514089 PDE4AP27815 886 aa17.48■□□□□ 0.39
SNF8-212ENST00000514089 RGMBQ6NW40 437 aa17.48■□□□□ 0.39
SNF8-212ENST00000514089 CDAN1Q8IWY9 1227 aa17.48■□□□□ 0.39
SNF8-212ENST00000514089 AMOTL1Q8IY63 956 aa17.48■□□□□ 0.39
SNF8-212ENST00000514089 CRACR2BQ8N4Y2 399 aaPredicted RBP17.48■□□□□ 0.39
SNF8-212ENST00000514089 CCDC102AQ96A19 550 aa17.48■□□□□ 0.39
SNF8-212ENST00000514089 ZNF341Q9BYN7 854 aa17.48■□□□□ 0.39
SNF8-212ENST00000514089 OSBPL5Q9H0X9 879 aaPredicted RBP17.48■□□□□ 0.39
SNF8-212ENST00000514089 DDX4Q9NQI0 724 aaKnown RBP17.48■□□□□ 0.39
SNF8-212ENST00000514089 FZD1Q9UP38 647 aa17.48■□□□□ 0.39
SNF8-212ENST00000514089 CSADQ9Y600 493 aa17.48■□□□□ 0.39
SNF8-212ENST00000514089 ADAMTSL1Q8N6G6 1762 aa17.48■□□□□ 0.39
SNF8-212ENST00000514089 PSME4Q14997 1843 aa17.47■□□□□ 0.39
SNF8-212ENST00000514089 RASSF10A6NK89 507 aa17.47■□□□□ 0.39
SNF8-212ENST00000514089 USP2O75604 605 aaPredicted RBP17.47■□□□□ 0.39
SNF8-212ENST00000514089 CYP4F22Q6NT55 531 aa17.47■□□□□ 0.39
SNF8-212ENST00000514089 LCORLQ8N3X6 602 aa17.47■□□□□ 0.39
SNF8-212ENST00000514089 RIOK1Q9BRS2 568 aaKnown RBP17.47■□□□□ 0.39
SNF8-212ENST00000514089 PUS7LQ9H0K6 701 aaKnown RBP17.47■□□□□ 0.39
SNF8-212ENST00000514089 PI4KBQ9UBF8 816 aa17.47■□□□□ 0.39
SNF8-212ENST00000514089 SLC4A4Q9Y6R1 1079 aa17.47■□□□□ 0.39
SNF8-212ENST00000514089 DDTLA6NHG4 134 aaPredicted RBP17.46■□□□□ 0.39
SNF8-212ENST00000514089 CHGBP05060 677 aa17.46■□□□□ 0.39
SNF8-212ENST00000514089 MAP3K9P80192 1104 aa17.46■□□□□ 0.39
SNF8-212ENST00000514089 TTC6Q86TZ1 520 aa17.46■□□□□ 0.39
SNF8-212ENST00000514089 ANKRD13AQ8IZ07 590 aa17.46■□□□□ 0.39
SNF8-212ENST00000514089 HHIPL1Q96JK4 782 aa17.46■□□□□ 0.39
SNF8-212ENST00000514089 CAPNS2Q96L46 248 aa17.46■□□□□ 0.39
SNF8-212ENST00000514089 WRNIP1Q96S55 665 aa17.46■□□□□ 0.39
SNF8-212ENST00000514089 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.46■□□□□ 0.39
SNF8-212ENST00000514089 PALD1Q9ULE6 856 aa17.46■□□□□ 0.39
SNF8-212ENST00000514089 FLT1P17948 1338 aa17.46■□□□□ 0.38
SNF8-212ENST00000514089 VEGFBP49765 207 aa17.45■□□□□ 0.38
SNF8-212ENST00000514089 SLC4A8Q2Y0W8 1093 aa17.45■□□□□ 0.38
SNF8-212ENST00000514089 SDR42E1Q8WUS8 393 aa17.45■□□□□ 0.38
SNF8-212ENST00000514089 KLRG1Q96E93 195 aa17.45■□□□□ 0.38
SNF8-212ENST00000514089 DIAPH3Q9NSV4 1193 aa17.45■□□□□ 0.38
SNF8-212ENST00000514089 ATP8A2Q9NTI2 1148 aa17.45■□□□□ 0.38
SNF8-212ENST00000514089 MCM9Q9NXL9 1143 aa17.45■□□□□ 0.38
SNF8-212ENST00000514089 HIP1O00291 1037 aa17.44■□□□□ 0.38
SNF8-212ENST00000514089 GNAT2P19087 354 aa17.44■□□□□ 0.38
SNF8-212ENST00000514089 TTC22Q5TAA0 569 aa17.44■□□□□ 0.38
SNF8-212ENST00000514089 FOXP4Q8IVH2 680 aaPredicted RBP17.44■□□□□ 0.38
SNF8-212ENST00000514089 OSBP2Q969R2 916 aa17.44■□□□□ 0.38
SNF8-212ENST00000514089 NACAP1Q9BZK3 213 aa17.44■□□□□ 0.38
SNF8-212ENST00000514089 WDR33Q9C0J8 1336 aaKnown RBP17.44■□□□□ 0.38
SNF8-212ENST00000514089 UNCXA6NJT0 531 aa17.43■□□□□ 0.38
SNF8-212ENST00000514089 GPAA1O43292 621 aa17.43■□□□□ 0.38
SNF8-212ENST00000514089 PRKAB2O43741 272 aa17.43■□□□□ 0.38
SNF8-212ENST00000514089 SH3BP5LQ7L8J4 393 aa17.43■□□□□ 0.38
SNF8-212ENST00000514089 TICAM2Q86XR7 235 aa17.43■□□□□ 0.38
SNF8-212ENST00000514089 STRBPQ96SI9 672 aaKnown RBP17.43■□□□□ 0.38
SNF8-212ENST00000514089 RPAP1Q9BWH6 1393 aaPredicted RBP17.42■□□□□ 0.38
SNF8-212ENST00000514089 SDSP20132 328 aa17.42■□□□□ 0.38
SNF8-212ENST00000514089 MKRN3Q13064 507 aaKnown RBP17.42■□□□□ 0.38
SNF8-212ENST00000514089 MAP3K11Q16584 847 aa17.42■□□□□ 0.38
SNF8-212ENST00000514089 ZMYM1Q5SVZ6 1142 aa17.42■□□□□ 0.38
SNF8-212ENST00000514089 LDLRAD1Q5T700 205 aa17.42■□□□□ 0.38
SNF8-212ENST00000514089 DNAJC5GQ8N7S2 189 aa17.42■□□□□ 0.38
SNF8-212ENST00000514089 SEC62Q99442 399 aaKnown RBP17.42■□□□□ 0.38
SNF8-212ENST00000514089 ELP3Q9H9T3 547 aa17.42■□□□□ 0.38
SNF8-212ENST00000514089 PICK1Q9NRD5 415 aa17.42■□□□□ 0.38
SNF8-212ENST00000514089 HELLSQ9NRZ9 838 aa17.42■□□□□ 0.38
SNF8-212ENST00000514089 PATL2C9JE40 543 aaKnown RBP17.41■□□□□ 0.38
SNF8-212ENST00000514089 M0R2C6 588 aa17.41■□□□□ 0.38
SNF8-212ENST00000514089 TDO2P48775 406 aa17.41■□□□□ 0.38
SNF8-212ENST00000514089 MFAP1P55081 439 aaKnown RBP17.41■□□□□ 0.38
SNF8-212ENST00000514089 NOGQ13253 232 aa17.41■□□□□ 0.38
SNF8-212ENST00000514089 MCMDC2Q4G0Z9 681 aa17.41■□□□□ 0.38
SNF8-212ENST00000514089 ZKSCAN4Q969J2 545 aaPredicted RBP17.41■□□□□ 0.38
SNF8-212ENST00000514089 CLMNQ96JQ2 1002 aa17.41■□□□□ 0.38
SNF8-212ENST00000514089 BEGAINQ9BUH8 593 aa17.41■□□□□ 0.38
SNF8-212ENST00000514089 DCP1AQ9NPI6 582 aaPredicted RBP17.41■□□□□ 0.38
SNF8-212ENST00000514089 HERC5Q9UII4 1024 aaKnown RBP17.41■□□□□ 0.38
SNF8-212ENST00000514089 ZNF646O15015 1829 aaPredicted RBP17.4■□□□□ 0.38
SNF8-212ENST00000514089 TBC1D12O60347 775 aa17.4■□□□□ 0.38
SNF8-212ENST00000514089 VGLL4Q14135 290 aa17.4■□□□□ 0.38
SNF8-212ENST00000514089 CWC27Q6UX04 472 aaKnown RBP17.4■□□□□ 0.38
SNF8-212ENST00000514089 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.4■□□□□ 0.383e-6■■■■■ 38.3
SNF8-212ENST00000514089 SERPINB13Q9UIV8 391 aa17.4■□□□□ 0.38
SNF8-212ENST00000514089 FAM196BA6NMK8 535 aa17.39■□□□□ 0.37
SNF8-212ENST00000514089 MINDY4BA8MYZ0 360 aa17.39■□□□□ 0.37
SNF8-212ENST00000514089 USP17L12C9JPN9 530 aa17.39■□□□□ 0.37
SNF8-212ENST00000514089 USP17L21D6R901 530 aa17.39■□□□□ 0.37
SNF8-212ENST00000514089 AOC2O75106 756 aa17.39■□□□□ 0.37
SNF8-212ENST00000514089 INPP5BP32019 993 aa17.39■□□□□ 0.37
SNF8-212ENST00000514089 MAP2K2P36507 400 aa17.39■□□□□ 0.37
SNF8-212ENST00000514089 NMIQ13287 307 aaPredicted RBP17.39■□□□□ 0.37
SNF8-212ENST00000514089 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 234.4 ms