RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 APPBP2Q92624 585 aa18.77■□□□□ 0.6
SQSTM1-213ENST00000510187 FBXW7Q969H0 707 aa18.77■□□□□ 0.6
SQSTM1-213ENST00000510187 TAOK3Q9H2K8 898 aa18.77■□□□□ 0.6
SQSTM1-213ENST00000510187 R3HCC1Q9Y3T6 440 aaKnown RBP18.77■□□□□ 0.6
SQSTM1-213ENST00000510187 KIF3AQ9Y496 699 aa18.77■□□□□ 0.6
SQSTM1-213ENST00000510187 GOLGA6L4A6NEF3 574 aa18.77■□□□□ 0.59
SQSTM1-213ENST00000510187 PRDX5P30044 214 aa18.77■□□□□ 0.59
SQSTM1-213ENST00000510187 STK3Q13188 491 aa18.77■□□□□ 0.59
SQSTM1-213ENST00000510187 HSP90AA2PQ14568 343 aaPredicted RBP18.77■□□□□ 0.59
SQSTM1-213ENST00000510187 SPTY2D1Q68D10 685 aaPredicted RBP18.77■□□□□ 0.59
SQSTM1-213ENST00000510187 SASS6Q6UVJ0 657 aa18.77■□□□□ 0.59
SQSTM1-213ENST00000510187 DHX32Q7L7V1 743 aaKnown RBP18.77■□□□□ 0.59
SQSTM1-213ENST00000510187 FAM200AQ8TCP9 573 aa18.77■□□□□ 0.59
SQSTM1-213ENST00000510187 PIBF1Q8WXW3 757 aa18.77■□□□□ 0.59
SQSTM1-213ENST00000510187 OSBP2Q969R2 916 aa18.77■□□□□ 0.59
SQSTM1-213ENST00000510187 AGXT2Q9BYV1 514 aa18.77■□□□□ 0.59
SQSTM1-213ENST00000510187 FAM205AQ6ZU69 1335 aa18.76■□□□□ 0.59
SQSTM1-213ENST00000510187 DOCK2Q92608 1830 aa18.76■□□□□ 0.59
SQSTM1-213ENST00000510187 MYH7P12883 1935 aa18.76■□□□□ 0.59
SQSTM1-213ENST00000510187 HMGN5P82970 282 aaKnown RBP18.76■□□□□ 0.59
SQSTM1-213ENST00000510187 MFSD14BQ5SR56 506 aa18.76■□□□□ 0.59
SQSTM1-213ENST00000510187 TTLL5Q6EMB2 1281 aa18.76■□□□□ 0.59
SQSTM1-213ENST00000510187 NAA16Q6N069 864 aaPredicted RBP18.76■□□□□ 0.59
SQSTM1-213ENST00000510187 LARGE2Q8N3Y3 721 aa18.76■□□□□ 0.59
SQSTM1-213ENST00000510187 TBC1D22AQ8WUA7 517 aa18.76■□□□□ 0.59
SQSTM1-213ENST00000510187 VPS33BQ9H267 617 aa18.76■□□□□ 0.59
SQSTM1-213ENST00000510187 MYO5AQ9Y4I1 1855 aaKnown RBP18.76■□□□□ 0.59
SQSTM1-213ENST00000510187 MAST3O60307 1309 aa18.76■□□□□ 0.59
SQSTM1-213ENST00000510187 TCRBV5S4A2TA0A5A2 114 aa18.75■□□□□ 0.59
SQSTM1-213ENST00000510187 LDHBP07195 334 aaKnown RBP18.75■□□□□ 0.59
SQSTM1-213ENST00000510187 LIG1P18858 919 aa18.75■□□□□ 0.59
SQSTM1-213ENST00000510187 BRF1Q92994 677 aa18.75■□□□□ 0.59
SQSTM1-213ENST00000510187 PUS7LQ9H0K6 701 aaKnown RBP18.75■□□□□ 0.59
SQSTM1-213ENST00000510187 CLSTN2Q9H4D0 955 aa18.75■□□□□ 0.59
SQSTM1-213ENST00000510187 LAMA4Q16363 1823 aa18.74■□□□□ 0.59
SQSTM1-213ENST00000510187 M0R2C6 588 aa18.74■□□□□ 0.59
SQSTM1-213ENST00000510187 NFKBIEO00221 500 aa18.74■□□□□ 0.59
SQSTM1-213ENST00000510187 JAK2O60674 1132 aa18.74■□□□□ 0.59
SQSTM1-213ENST00000510187 IARSP41252 1262 aaKnown RBP18.74■□□□□ 0.59
SQSTM1-213ENST00000510187 MECOMQ03112 1051 aa18.74■□□□□ 0.59
SQSTM1-213ENST00000510187 ATL3Q6DD88 541 aa18.74■□□□□ 0.59
SQSTM1-213ENST00000510187 TNMDQ9H2S6 317 aa18.74■□□□□ 0.59
SQSTM1-213ENST00000510187 CFAP45Q9UL16 551 aa18.74■□□□□ 0.59
SQSTM1-213ENST00000510187 H3BQV1 296 aa18.74■□□□□ 0.59
SQSTM1-213ENST00000510187 CYP7A1P22680 504 aa18.74■□□□□ 0.59
SQSTM1-213ENST00000510187 EXOSC10Q01780 885 aaKnown RBP18.74■□□□□ 0.59
SQSTM1-213ENST00000510187 TYRO3Q06418 890 aa18.74■□□□□ 0.59
SQSTM1-213ENST00000510187 IFFO2Q5TF58 517 aa18.74■□□□□ 0.59
SQSTM1-213ENST00000510187 STOX1Q6ZVD7 989 aa18.74■□□□□ 0.59
SQSTM1-213ENST00000510187 DZIP1Q86YF9 867 aaKnown RBP18.74■□□□□ 0.59
SQSTM1-213ENST00000510187 FBXL16Q8N461 479 aa18.74■□□□□ 0.59
SQSTM1-213ENST00000510187 NSUN4Q96CB9 384 aaKnown RBP18.74■□□□□ 0.59
SQSTM1-213ENST00000510187 KCNQ5Q9NR82 932 aa18.74■□□□□ 0.59
SQSTM1-213ENST00000510187 GOLGA6L6A8MZA4 724 aa18.73■□□□□ 0.59
SQSTM1-213ENST00000510187 CAVIN2O95810 425 aa18.73■□□□□ 0.59
SQSTM1-213ENST00000510187 FGD1P98174 961 aa18.73■□□□□ 0.59
SQSTM1-213ENST00000510187 SCRN1Q12765 414 aa18.73■□□□□ 0.59
SQSTM1-213ENST00000510187 GRIK5Q16478 980 aa18.73■□□□□ 0.59
SQSTM1-213ENST00000510187 SPTLC3Q9NUV7 552 aa18.73■□□□□ 0.59
SQSTM1-213ENST00000510187 DACT1Q9NYF0 836 aa18.73■□□□□ 0.59
SQSTM1-213ENST00000510187 MRVI1Q9Y6F6 885 aa18.73■□□□□ 0.59
SQSTM1-213ENST00000510187 FER1L6Q2WGJ9 1857 aa18.73■□□□□ 0.59
SQSTM1-213ENST00000510187 CHD4Q14839 1912 aa18.73■□□□□ 0.59
SQSTM1-213ENST00000510187 DTNBO60941 627 aa18.72■□□□□ 0.59
SQSTM1-213ENST00000510187 IGSF3O75054 1194 aa18.72■□□□□ 0.59
SQSTM1-213ENST00000510187 TPRNQ4KMQ1 711 aa18.72■□□□□ 0.59
SQSTM1-213ENST00000510187 FAM173BQ6P4H8 233 aa18.72■□□□□ 0.59
SQSTM1-213ENST00000510187 NSUN7Q8NE18 718 aaKnown RBP18.72■□□□□ 0.59
SQSTM1-213ENST00000510187 ZNF384Q8TF68 577 aa18.72■□□□□ 0.59
SQSTM1-213ENST00000510187 LTBP3Q9NS15 1303 aa18.72■□□□□ 0.59
SQSTM1-213ENST00000510187 USP17L3A6NCW0 530 aa18.71■□□□□ 0.59
SQSTM1-213ENST00000510187 USP17L4A6NCW7 530 aa18.71■□□□□ 0.59
SQSTM1-213ENST00000510187 YDJCA8MPS7 323 aa18.71■□□□□ 0.59
SQSTM1-213ENST00000510187 DYNC1I1O14576 645 aa18.71■□□□□ 0.59
SQSTM1-213ENST00000510187 GPAA1O43292 621 aa18.71■□□□□ 0.59
SQSTM1-213ENST00000510187 RASSF7Q02833 373 aa18.71■□□□□ 0.59
SQSTM1-213ENST00000510187 STRIP1Q5VSL9 837 aa18.71■□□□□ 0.59
SQSTM1-213ENST00000510187 USP17L1Q7RTZ2 530 aa18.71■□□□□ 0.59
SQSTM1-213ENST00000510187 ADGRA1Q86SQ6 560 aa18.71■□□□□ 0.59
SQSTM1-213ENST00000510187 NIM1KQ8IY84 436 aa18.71■□□□□ 0.59
SQSTM1-213ENST00000510187 AIDAQ96BJ3 306 aa18.71■□□□□ 0.59
SQSTM1-213ENST00000510187 ARFGEF1Q9Y6D6 1849 aa18.71■□□□□ 0.59
SQSTM1-213ENST00000510187 HSPD1P10809 573 aaKnown RBP18.71■□□□□ 0.59
SQSTM1-213ENST00000510187 TMED8Q6PL24 325 aaPredicted RBP18.71■□□□□ 0.59
SQSTM1-213ENST00000510187 MIGA1Q8NAN2 632 aa18.71■□□□□ 0.59
SQSTM1-213ENST00000510187 ZNF274Q96GC6 653 aaPredicted RBP18.71■□□□□ 0.59
SQSTM1-213ENST00000510187 MXD3Q9BW11 206 aa18.71■□□□□ 0.59
SQSTM1-213ENST00000510187 MYH15Q9Y2K3 1946 aa18.7■□□□□ 0.58
SQSTM1-213ENST00000510187 UQCRHLA0A096LP55 91 aa18.7■□□□□ 0.58
SQSTM1-213ENST00000510187 UQCRHP07919 91 aa18.7■□□□□ 0.58
SQSTM1-213ENST00000510187 CERS5Q8N5B7 392 aa18.7■□□□□ 0.58
SQSTM1-213ENST00000510187 MAP7D2Q96T17 732 aa18.7■□□□□ 0.58
SQSTM1-213ENST00000510187 TFIP11Q9UBB9 837 aaKnown RBP18.7■□□□□ 0.58
SQSTM1-213ENST00000510187 SUGT1Q9Y2Z0 365 aa18.7■□□□□ 0.58
SQSTM1-213ENST00000510187 COL4A5P29400 1685 aa18.7■□□□□ 0.58
SQSTM1-213ENST00000510187 E7EWF7 191 aa18.69■□□□□ 0.58
SQSTM1-213ENST00000510187 MBD4O95243 580 aa18.69■□□□□ 0.58
SQSTM1-213ENST00000510187 GSTO1P78417 241 aa18.69■□□□□ 0.58
SQSTM1-213ENST00000510187 NOLC1Q14978 699 aaKnown RBP eCLIP18.69■□□□□ 0.58
SQSTM1-213ENST00000510187 DACT2Q5SW24 774 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms