RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 CD8BP10966 210 aa8.64□□□□□ -1.03
LINC01088-205ENST00000509088 CD96P40200 585 aa8.64□□□□□ -1.03
LINC01088-205ENST00000509088 OXCT1P55809 520 aa8.64□□□□□ -1.03
LINC01088-205ENST00000509088 JAG1P78504 1218 aa8.64□□□□□ -1.03
LINC01088-205ENST00000509088 ZNF252P-AS1Q0IIN9 211 aa8.64□□□□□ -1.03
LINC01088-205ENST00000509088 PLCL1Q15111 1095 aa8.64□□□□□ -1.03
LINC01088-205ENST00000509088 ZC3H12AQ5D1E8 599 aaKnown RBP8.64□□□□□ -1.03
LINC01088-205ENST00000509088 MPRIPQ6WCQ1 1025 aa8.64□□□□□ -1.03
LINC01088-205ENST00000509088 SULF2Q8IWU5 870 aa8.64□□□□□ -1.03
LINC01088-205ENST00000509088 STK11IPQ8N1F8 1099 aa8.64□□□□□ -1.03
LINC01088-205ENST00000509088 PLAGL2Q9UPG8 496 aa8.64□□□□□ -1.03
LINC01088-205ENST00000509088 C8AP07357 584 aa8.63□□□□□ -1.03
LINC01088-205ENST00000509088 FZD5Q13467 585 aa8.63□□□□□ -1.03
LINC01088-205ENST00000509088 KCNB2Q92953 911 aa8.63□□□□□ -1.03
LINC01088-205ENST00000509088 MISP3Q96FF7 219 aa8.63□□□□□ -1.03
LINC01088-205ENST00000509088 FUT4P22083 530 aa8.62□□□□□ -1.03
LINC01088-205ENST00000509088 NTF4P34130 210 aa8.62□□□□□ -1.03
LINC01088-205ENST00000509088 NXPE4Q6UWF7 544 aa8.62□□□□□ -1.03
LINC01088-205ENST00000509088 FAM214BQ7L5A3 538 aa8.62□□□□□ -1.03
LINC01088-205ENST00000509088 CCER1Q8TC90 406 aaPredicted RBP8.62□□□□□ -1.03
LINC01088-205ENST00000509088 XRCC5P13010 732 aaKnown RBP8.61□□□□□ -1.03
LINC01088-205ENST00000509088 ARNTP27540 789 aa8.61□□□□□ -1.03
LINC01088-205ENST00000509088 PPP2R3AQ06190 1150 aa8.61□□□□□ -1.03
LINC01088-205ENST00000509088 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.61□□□□□ -1.03
LINC01088-205ENST00000509088 UBE3DQ7Z6J8 389 aa8.61□□□□□ -1.03
LINC01088-205ENST00000509088 GPBAR1Q8TDU6 330 aa8.61□□□□□ -1.03
LINC01088-205ENST00000509088 MBNL3Q9NUK0 354 aaKnown RBP8.61□□□□□ -1.03
LINC01088-205ENST00000509088 DCTN4Q9UJW0 460 aa8.61□□□□□ -1.03
LINC01088-205ENST00000509088 PCOLCE2Q9UKZ9 415 aa8.61□□□□□ -1.03
LINC01088-205ENST00000509088 TREHO43280 583 aa8.6□□□□□ -1.03
LINC01088-205ENST00000509088 RNGTTO60942 597 aaKnown RBP8.6□□□□□ -1.03
LINC01088-205ENST00000509088 RNASE1P07998 156 aaKnown RBP8.6□□□□□ -1.03
LINC01088-205ENST00000509088 NME2P22392 152 aa8.6□□□□□ -1.03
LINC01088-205ENST00000509088 ERVK-24P63145 666 aa8.6□□□□□ -1.03
LINC01088-205ENST00000509088 ENOX2Q16206 610 aaKnown RBP8.6□□□□□ -1.03
LINC01088-205ENST00000509088 MAP1SQ66K74 1059 aaPredicted RBP8.6□□□□□ -1.03
LINC01088-205ENST00000509088 RNF214Q8ND24 703 aa8.6□□□□□ -1.03
LINC01088-205ENST00000509088 HEXIM2Q96MH2 286 aaKnown RBP8.6□□□□□ -1.03
LINC01088-205ENST00000509088 NECAB3Q96P71 396 aaPredicted RBP8.6□□□□□ -1.03
LINC01088-205ENST00000509088 MKNK2Q9HBH9 465 aa8.6□□□□□ -1.03
LINC01088-205ENST00000509088 NLRP2Q9NX02 1062 aa8.6□□□□□ -1.03
LINC01088-205ENST00000509088 VAV3Q9UKW4 847 aa8.6□□□□□ -1.03
LINC01088-205ENST00000509088 GNEQ9Y223 722 aaKnown RBP8.6□□□□□ -1.03
LINC01088-205ENST00000509088 PNMA6FA0A0J9YX94 578 aa8.59□□□□□ -1.03
LINC01088-205ENST00000509088 CEACAM5P06731 702 aa8.59□□□□□ -1.03
LINC01088-205ENST00000509088 PRKCQQ04759 706 aa8.59□□□□□ -1.03
LINC01088-205ENST00000509088 LCE1DQ5T752 114 aa8.59□□□□□ -1.03
LINC01088-205ENST00000509088 RASIP1Q5U651 963 aa8.59□□□□□ -1.03
LINC01088-205ENST00000509088 TOP6BLQ8N6T0 577 aa8.59□□□□□ -1.03
LINC01088-205ENST00000509088 ENC1O14682 589 aa8.58□□□□□ -1.04
LINC01088-205ENST00000509088 PAGE1O75459 146 aa8.58□□□□□ -1.04
LINC01088-205ENST00000509088 BMP6P22004 513 aa8.58□□□□□ -1.04
LINC01088-205ENST00000509088 IFI16Q16666 785 aaKnown RBP8.58□□□□□ -1.04
LINC01088-205ENST00000509088 GRIN3AQ8TCU5 1115 aa8.58□□□□□ -1.04
LINC01088-205ENST00000509088 TNKS2Q9H2K2 1166 aa8.58□□□□□ -1.04
LINC01088-205ENST00000509088 AKAP2Q9Y2D5 859 aa8.58□□□□□ -1.04
LINC01088-205ENST00000509088 RING1Q06587 406 aa8.57□□□□□ -1.04
LINC01088-205ENST00000509088 LRRN4CLQ8ND94 238 aa8.57□□□□□ -1.04
LINC01088-205ENST00000509088 SETDB2Q96T68 719 aa8.57□□□□□ -1.04
LINC01088-205ENST00000509088 AOC3Q16853 763 aa8.56□□□□□ -1.04
LINC01088-205ENST00000509088 PPM1JQ5JR12 505 aa8.56□□□□□ -1.04
LINC01088-205ENST00000509088 ATG4DQ86TL0 474 aaPredicted RBP8.56□□□□□ -1.04
LINC01088-205ENST00000509088 RC3H2Q9HBD1 1191 aaKnown RBP8.56□□□□□ -1.04
LINC01088-205ENST00000509088 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.55□□□□□ -1.04
LINC01088-205ENST00000509088 HRASLS5Q96KN8 279 aa8.55□□□□□ -1.04
LINC01088-205ENST00000509088 OSBPL7Q9BZF2 842 aa8.55□□□□□ -1.04
LINC01088-205ENST00000509088 PPP4R2Q9NY27 417 aa8.55□□□□□ -1.04
LINC01088-205ENST00000509088 CSADQ9Y600 493 aa8.55□□□□□ -1.04
LINC01088-205ENST00000509088 ZNF648Q5T619 568 aaPredicted RBP8.54□□□□□ -1.04
LINC01088-205ENST00000509088 TPTE2Q6XPS3 522 aa8.54□□□□□ -1.04
LINC01088-205ENST00000509088 BIN2Q9UBW5 565 aaPredicted RBP8.54□□□□□ -1.04
LINC01088-205ENST00000509088 FBXO24O75426 580 aa8.53□□□□□ -1.04
LINC01088-205ENST00000509088 ITIH2P19823 946 aa8.53□□□□□ -1.04
LINC01088-205ENST00000509088 HNRNPUQ00839 825 aaKnown RBP eCLIP8.53□□□□□ -1.04
LINC01088-205ENST00000509088 PLCB3Q01970 1234 aa8.53□□□□□ -1.04
LINC01088-205ENST00000509088 SPACA3Q8IXA5 215 aa8.53□□□□□ -1.04
LINC01088-205ENST00000509088 EMILIN2Q9BXX0 1053 aa8.53□□□□□ -1.04
LINC01088-205ENST00000509088 TMEM265A0A087WTH1 108 aa8.52□□□□□ -1.05
LINC01088-205ENST00000509088 DCDC2CA8MYV0 355 aa8.52□□□□□ -1.05
LINC01088-205ENST00000509088 MAPK1P28482 360 aa8.52□□□□□ -1.05
LINC01088-205ENST00000509088 FMR1Q06787 632 aaKnown RBP eCLIP8.52□□□□□ -1.05
LINC01088-205ENST00000509088 NKPD1Q17RQ9 610 aa8.52□□□□□ -1.05
LINC01088-205ENST00000509088 HOMEZQ8IX15 550 aa8.52□□□□□ -1.05
LINC01088-205ENST00000509088 KRTAP4-7Q9BYR0 210 aa8.52□□□□□ -1.05
LINC01088-205ENST00000509088 CBX8Q9HC52 389 aa8.52□□□□□ -1.05
LINC01088-205ENST00000509088 IGF2BP3O00425 579 aaKnown RBP eCLIP8.51□□□□□ -1.05
LINC01088-205ENST00000509088 BIN1O00499 593 aa8.51□□□□□ -1.05
LINC01088-205ENST00000509088 TRIM37O94972 964 aa8.51□□□□□ -1.05
LINC01088-205ENST00000509088 EOMESO95936 686 aa8.51□□□□□ -1.05
LINC01088-205ENST00000509088 ZBTB37Q5TC79 503 aa8.51□□□□□ -1.05
LINC01088-205ENST00000509088 C12orf40Q86WS4 652 aa8.51□□□□□ -1.05
LINC01088-205ENST00000509088 PI4K2BQ8TCG2 481 aa8.51□□□□□ -1.05
LINC01088-205ENST00000509088 ANKRD24Q8TF21 1146 aa8.51□□□□□ -1.05
LINC01088-205ENST00000509088 FAM168AQ92567 244 aa8.51□□□□□ -1.05
LINC01088-205ENST00000509088 ACSBG1Q96GR2 724 aa8.51□□□□□ -1.05
LINC01088-205ENST00000509088 SSU72Q9NP77 194 aaKnown RBP8.51□□□□□ -1.05
LINC01088-205ENST00000509088 PRDM10Q9NQV6 1147 aa8.51□□□□□ -1.05
LINC01088-205ENST00000509088 PRDM7Q9NQW5 492 aa8.51□□□□□ -1.05
LINC01088-205ENST00000509088 GSTT1P30711 240 aa8.5□□□□□ -1.05
LINC01088-205ENST00000509088 WWC3Q9ULE0 1092 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms