RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 AATFQ9NY61 560 aaKnown RBP eCLIP29.44■■■□□ 2.3
SRPK1-210ENST00000508473 OTOFQ9HC10 1997 aa29.44■■■□□ 2.3
SRPK1-210ENST00000508473 MANSC4A6NHS7 340 aaPredicted RBP29.43■■■□□ 2.3
SRPK1-210ENST00000508473 SH3RF3Q8TEJ3 882 aaPredicted RBP29.43■■■□□ 2.3
SRPK1-210ENST00000508473 DDTLA6NHG4 134 aaPredicted RBP29.42■■■□□ 2.3
SRPK1-210ENST00000508473 TEX11Q8IYF3 940 aa29.42■■■□□ 2.3
SRPK1-210ENST00000508473 SNCAIPQ9Y6H5 919 aa29.42■■■□□ 2.3
SRPK1-210ENST00000508473 CYP7A1P22680 504 aa29.41■■■□□ 2.3
SRPK1-210ENST00000508473 INPP5BP32019 993 aa29.41■■■□□ 2.3
SRPK1-210ENST00000508473 OTUD5Q96G74 571 aa29.41■■■□□ 2.3
SRPK1-210ENST00000508473 DNAJC2Q99543 621 aaKnown RBP29.41■■■□□ 2.3
SRPK1-210ENST00000508473 DCTPP1Q9H773 170 aa29.41■■■□□ 2.3
SRPK1-210ENST00000508473 AK9Q5TCS8 1911 aa29.41■■■□□ 2.3
SRPK1-210ENST00000508473 TBC1D8O95759 1140 aa29.4■■■□□ 2.3
SRPK1-210ENST00000508473 BAG3O95817 575 aa29.4■■■□□ 2.3
SRPK1-210ENST00000508473 SLURP2P0DP57 97 aa29.4■■■□□ 2.3
SRPK1-210ENST00000508473 MAGEB6Q8N7X4 407 aa29.4■■■□□ 2.3
SRPK1-210ENST00000508473 MAP4K4O95819 1239 aaPredicted RBP29.39■■■□□ 2.3
SRPK1-210ENST00000508473 MYO5AQ9Y4I1 1855 aaKnown RBP29.38■■■□□ 2.29
SRPK1-210ENST00000508473 MAP3K12Q12852 859 aa29.38■■■□□ 2.29
SRPK1-210ENST00000508473 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.38■■■□□ 2.29
SRPK1-210ENST00000508473 BOLA2Q9H3K6 86 aa29.38■■■□□ 2.29
SRPK1-210ENST00000508473 ZNF112Q9UJU3 913 aa29.38■■■□□ 2.29
SRPK1-210ENST00000508473 ATRNL1Q5VV63 1379 aa29.38■■■□□ 2.29
SRPK1-210ENST00000508473 MAST2Q6P0Q8 1798 aa29.37■■■□□ 2.29
SRPK1-210ENST00000508473 SPDYE5A6NIY4 337 aa29.37■■■□□ 2.29
SRPK1-210ENST00000508473 GOLIM4O00461 696 aa29.37■■■□□ 2.29
SRPK1-210ENST00000508473 IGSF3O75054 1194 aa29.37■■■□□ 2.29
SRPK1-210ENST00000508473 INHBEP58166 350 aa29.37■■■□□ 2.29
SRPK1-210ENST00000508473 PPP4CP60510 307 aa29.37■■■□□ 2.29
SRPK1-210ENST00000508473 DYNLL1P63167 89 aaKnown RBP29.37■■■□□ 2.29
SRPK1-210ENST00000508473 IFNL1Q8IU54 200 aa29.37■■■□□ 2.29
SRPK1-210ENST00000508473 MIGA1Q8NAN2 632 aa29.37■■■□□ 2.29
SRPK1-210ENST00000508473 EDC3Q96F86 508 aaKnown RBP29.37■■■□□ 2.29
SRPK1-210ENST00000508473 IGF2BP3O00425 579 aaKnown RBP eCLIP29.36■■■□□ 2.29
SRPK1-210ENST00000508473 NPM3O75607 178 aaKnown RBP29.36■■■□□ 2.29
SRPK1-210ENST00000508473 PLCG2P16885 1265 aa29.36■■■□□ 2.29
SRPK1-210ENST00000508473 ERO1BQ86YB8 467 aa29.36■■■□□ 2.29
SRPK1-210ENST00000508473 OSBPL5Q9H0X9 879 aaPredicted RBP29.36■■■□□ 2.29
SRPK1-210ENST00000508473 TTF1Q15361 905 aaPredicted RBP29.35■■■□□ 2.29
SRPK1-210ENST00000508473 TGFBRAP1Q8WUH2 860 aa29.35■■■□□ 2.29
SRPK1-210ENST00000508473 MS4A4AQ96JQ5 239 aa29.35■■■□□ 2.29
SRPK1-210ENST00000508473 CASP8AP2Q9UKL3 1982 aa29.35■■■□□ 2.29
SRPK1-210ENST00000508473 ATP5JP18859 108 aa29.34■■■□□ 2.29
SRPK1-210ENST00000508473 MAPKAPK5Q8IW41 473 aa29.34■■■□□ 2.29
SRPK1-210ENST00000508473 R3HDMLQ9H3Y0 253 aa29.34■■■□□ 2.29
SRPK1-210ENST00000508473 PTPN18Q99952 460 aa29.33■■■□□ 2.29
SRPK1-210ENST00000508473 CCL15-CCL14A0A0B4J2E2 113 aa29.32■■■□□ 2.28
SRPK1-210ENST00000508473 TESPA1A2RU30 521 aaPredicted RBP29.32■■■□□ 2.28
SRPK1-210ENST00000508473 FAM196BA6NMK8 535 aa29.32■■■□□ 2.28
SRPK1-210ENST00000508473 PHF20L1A8MW92 1017 aa29.32■■■□□ 2.28
SRPK1-210ENST00000508473 ALDH1A1P00352 501 aa29.32■■■□□ 2.28
SRPK1-210ENST00000508473 GTF2A2P52657 109 aa29.32■■■□□ 2.28
SRPK1-210ENST00000508473 CCL15Q16663 113 aa29.32■■■□□ 2.28
SRPK1-210ENST00000508473 BRI3BPQ8WY22 251 aa29.32■■■□□ 2.28
SRPK1-210ENST00000508473 IRF6O14896 467 aa29.31■■■□□ 2.28
SRPK1-210ENST00000508473 MAP3K10Q02779 954 aa29.31■■■□□ 2.28
SRPK1-210ENST00000508473 SLC9C2Q5TAH2 1124 aa29.31■■■□□ 2.28
SRPK1-210ENST00000508473 PAG1Q9NWQ8 432 aa29.31■■■□□ 2.28
SRPK1-210ENST00000508473 DOCK2Q92608 1830 aa29.31■■■□□ 2.28
SRPK1-210ENST00000508473 CAPN15O75808 1086 aa29.3■■■□□ 2.28
SRPK1-210ENST00000508473 PDE6AP16499 860 aa29.3■■■□□ 2.28
SRPK1-210ENST00000508473 PPATQ06203 517 aa29.3■■■□□ 2.28
SRPK1-210ENST00000508473 PPIL2Q13356 520 aa29.3■■■□□ 2.28
SRPK1-210ENST00000508473 NOL9Q5SY16 702 aaKnown RBP29.3■■■□□ 2.28
SRPK1-210ENST00000508473 OTUD7BQ6GQQ9 843 aa29.3■■■□□ 2.28
SRPK1-210ENST00000508473 HAUS7Q99871 368 aa29.3■■■□□ 2.28
SRPK1-210ENST00000508473 FLT1P17948 1338 aa29.29■■■□□ 2.28
SRPK1-210ENST00000508473 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.29■■■□□ 2.28
SRPK1-210ENST00000508473 SAP30BPQ9UHR5 308 aaKnown RBP29.29■■■□□ 2.28
SRPK1-210ENST00000508473 GPR25O00155 361 aa29.28■■■□□ 2.28
SRPK1-210ENST00000508473 SCYL3Q8IZE3 742 aa29.28■■■□□ 2.28
SRPK1-210ENST00000508473 ZNF296Q8WUU4 475 aaPredicted RBP29.28■■■□□ 2.28
SRPK1-210ENST00000508473 ECHDC1Q9NTX5 307 aa29.28■■■□□ 2.28
SRPK1-210ENST00000508473 COL2A1P02458 1487 aaPredicted RBP29.28■■■□□ 2.28
SRPK1-210ENST00000508473 ZNF532Q9HCE3 1301 aa29.27■■■□□ 2.28
SRPK1-210ENST00000508473 TBC1D12O60347 775 aa29.27■■■□□ 2.28
SRPK1-210ENST00000508473 SNAPC2Q13487 334 aa29.27■■■□□ 2.28
SRPK1-210ENST00000508473 TSHZ3Q63HK5 1081 aa29.27■■■□□ 2.28
SRPK1-210ENST00000508473 CFHR5Q9BXR6 569 aa29.27■■■□□ 2.28
SRPK1-210ENST00000508473 PICK1Q9NRD5 415 aa29.27■■■□□ 2.28
SRPK1-210ENST00000508473 SUPT16HQ9Y5B9 1047 aaKnown RBP29.27■■■□□ 2.28
SRPK1-210ENST00000508473 CETPP11597 493 aa29.26■■■□□ 2.27
SRPK1-210ENST00000508473 USP5P45974 858 aa29.26■■■□□ 2.27
SRPK1-210ENST00000508473 DGKZQ13574 1117 aa29.26■■■□□ 2.27
SRPK1-210ENST00000508473 SLC4A8Q2Y0W8 1093 aa29.26■■■□□ 2.27
SRPK1-210ENST00000508473 TMED8Q6PL24 325 aaPredicted RBP29.26■■■□□ 2.27
SRPK1-210ENST00000508473 DHX36Q9H2U1 1008 aaKnown RBP29.26■■■□□ 2.27
SRPK1-210ENST00000508473 PI4KBQ9UBF8 816 aa29.26■■■□□ 2.27
SRPK1-210ENST00000508473 PALD1Q9ULE6 856 aa29.26■■■□□ 2.27
SRPK1-210ENST00000508473 MAGEB6P1A0A0J9YX57 407 aa29.25■■■□□ 2.27
SRPK1-210ENST00000508473 SLFNL1Q499Z3 407 aa29.25■■■□□ 2.27
SRPK1-210ENST00000508473 FAM43AQ8N2R8 423 aa29.25■■■□□ 2.27
SRPK1-210ENST00000508473 RIOK1Q9BRS2 568 aaKnown RBP29.25■■■□□ 2.27
SRPK1-210ENST00000508473 MCOLN1Q9GZU1 580 aa29.25■■■□□ 2.27
SRPK1-210ENST00000508473 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.25■■■□□ 2.27
SRPK1-210ENST00000508473 TCRBV5S4A2TA0A5A2 114 aa29.24■■■□□ 2.27
SRPK1-210ENST00000508473 CTNND1O60716 968 aaKnown RBP29.24■■■□□ 2.27
SRPK1-210ENST00000508473 CRHR2Q13324 411 aa29.24■■■□□ 2.27
SRPK1-210ENST00000508473 CERS3Q8IU89 383 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms