RNA–Protein interactions for RNA: ENST00000508386.1

KDM3B-205, Transcript of lysine demethylase 3B, humanhuman

TSL 4

Gene KDM3B, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-205ENST00000508386 KIF22Q14807 665 aa7.35□□□□□ -1.23
KDM3B-205ENST00000508386 APOBEC3HQ6NTF7 200 aaKnown RBP7.35□□□□□ -1.23
KDM3B-205ENST00000508386 MIGA2Q7L4E1 593 aa7.35□□□□□ -1.23
KDM3B-205ENST00000508386 ANKRD23Q86SG2 305 aa7.35□□□□□ -1.23
KDM3B-205ENST00000508386 PAWRQ96IZ0 340 aaKnown RBP7.35□□□□□ -1.23
KDM3B-205ENST00000508386 WRNIP1Q96S55 665 aa7.35□□□□□ -1.23
KDM3B-205ENST00000508386 IFT57Q9NWB7 429 aa7.35□□□□□ -1.23
KDM3B-205ENST00000508386 ZMYND8Q9ULU4 1186 aaPredicted RBP7.35□□□□□ -1.23
KDM3B-205ENST00000508386 KCNH4Q9UQ05 1017 aa7.35□□□□□ -1.23
KDM3B-205ENST00000508386 CSADQ9Y600 493 aa7.35□□□□□ -1.23
KDM3B-205ENST00000508386 ARAP2Q8WZ64 1704 aa7.35□□□□□ -1.23
KDM3B-205ENST00000508386 ANKRD18BA2A2Z9 1011 aa7.34□□□□□ -1.23
KDM3B-205ENST00000508386 PLIN1O60240 522 aa7.34□□□□□ -1.23
KDM3B-205ENST00000508386 SLURP2P0DP57 97 aa7.34□□□□□ -1.23
KDM3B-205ENST00000508386 FLT3LGP49771 235 aa7.34□□□□□ -1.23
KDM3B-205ENST00000508386 PPATQ06203 517 aa7.34□□□□□ -1.23
KDM3B-205ENST00000508386 TNFAIP1Q13829 316 aa7.34□□□□□ -1.23
KDM3B-205ENST00000508386 LRIT3Q3SXY7 679 aa7.34□□□□□ -1.23
KDM3B-205ENST00000508386 CCDC30Q5VVM6 783 aa7.34□□□□□ -1.23
KDM3B-205ENST00000508386 GPR153Q6NV75 609 aa7.34□□□□□ -1.23
KDM3B-205ENST00000508386 ZNF804AQ7Z570 1209 aa7.34□□□□□ -1.23
KDM3B-205ENST00000508386 DEFB118Q96PH6 123 aa7.34□□□□□ -1.23
KDM3B-205ENST00000508386 PUS3Q9BZE2 481 aaKnown RBP7.34□□□□□ -1.23
KDM3B-205ENST00000508386 PAK6Q9NQU5 681 aaPredicted RBP7.34□□□□□ -1.23
KDM3B-205ENST00000508386 BIN2Q9UBW5 565 aaPredicted RBP7.34□□□□□ -1.23
KDM3B-205ENST00000508386 ZNF112Q9UJU3 913 aa7.34□□□□□ -1.23
KDM3B-205ENST00000508386 APAF1O14727 1248 aa7.33□□□□□ -1.24
KDM3B-205ENST00000508386 ADCY3O60266 1144 aa7.33□□□□□ -1.24
KDM3B-205ENST00000508386 TFRCP02786 760 aaKnown RBP7.33□□□□□ -1.24
KDM3B-205ENST00000508386 INHAP05111 366 aa7.33□□□□□ -1.24
KDM3B-205ENST00000508386 SYN1P17600 705 aa7.33□□□□□ -1.24
KDM3B-205ENST00000508386 PDE4AP27815 886 aa7.33□□□□□ -1.24
KDM3B-205ENST00000508386 HOXD10P28358 340 aa7.33□□□□□ -1.24
KDM3B-205ENST00000508386 FBXO33Q7Z6M2 555 aa7.33□□□□□ -1.24
KDM3B-205ENST00000508386 ZFPM1Q8IX07 1006 aa7.33□□□□□ -1.24
KDM3B-205ENST00000508386 TMC2Q8TDI7 906 aa7.33□□□□□ -1.24
KDM3B-205ENST00000508386 GUCD1Q96NT3 240 aa7.33□□□□□ -1.24
KDM3B-205ENST00000508386 IQSEC3Q9UPP2 1182 aaPredicted RBP7.33□□□□□ -1.24
KDM3B-205ENST00000508386 MGAMO43451 1857 aa7.32□□□□□ -1.24
KDM3B-205ENST00000508386 HIBADHP31937 336 aaKnown RBP7.32□□□□□ -1.24
KDM3B-205ENST00000508386 MAGEA10P43363 369 aaPredicted RBP7.32□□□□□ -1.24
KDM3B-205ENST00000508386 GNAI1P63096 354 aa7.32□□□□□ -1.24
KDM3B-205ENST00000508386 UBXN2AP68543 259 aa7.32□□□□□ -1.24
KDM3B-205ENST00000508386 NEXNQ0ZGT2 675 aa7.32□□□□□ -1.24
KDM3B-205ENST00000508386 TRIM32Q13049 653 aa7.32□□□□□ -1.24
KDM3B-205ENST00000508386 IFIT5Q13325 482 aaKnown RBP7.32□□□□□ -1.24
KDM3B-205ENST00000508386 RALBP1Q15311 655 aa7.32□□□□□ -1.24
KDM3B-205ENST00000508386 LMBR1LQ6UX01 489 aa7.32□□□□□ -1.24
KDM3B-205ENST00000508386 FAM83AQ86UY5 434 aa7.32□□□□□ -1.24
KDM3B-205ENST00000508386 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.32□□□□□ -1.24
KDM3B-205ENST00000508386 C7orf61Q8IZ16 206 aa7.32□□□□□ -1.24
KDM3B-205ENST00000508386 TSR2Q969E8 191 aaKnown RBP7.32□□□□□ -1.24
KDM3B-205ENST00000508386 KAZALD1Q96I82 304 aa7.32□□□□□ -1.24
KDM3B-205ENST00000508386 ZDHHC15Q96MV8 337 aa7.32□□□□□ -1.24
KDM3B-205ENST00000508386 PHF20L1A8MW92 1017 aa7.31□□□□□ -1.24
KDM3B-205ENST00000508386 F6X3S4 739 aa7.31□□□□□ -1.24
KDM3B-205ENST00000508386 TNNI2P48788 182 aa7.31□□□□□ -1.24
KDM3B-205ENST00000508386 FCGRTP55899 365 aa7.31□□□□□ -1.24
KDM3B-205ENST00000508386 NFIAQ12857 509 aa7.31□□□□□ -1.24
KDM3B-205ENST00000508386 FLIIQ13045 1269 aa7.31□□□□□ -1.24
KDM3B-205ENST00000508386 IRF5Q13568 498 aa7.31□□□□□ -1.24
KDM3B-205ENST00000508386 FKBP1CQ5VVH2 108 aa7.31□□□□□ -1.24
KDM3B-205ENST00000508386 LDHAL6AQ6ZMR3 332 aa7.31□□□□□ -1.24
KDM3B-205ENST00000508386 LINS1Q8NG48 757 aa7.31□□□□□ -1.24
KDM3B-205ENST00000508386 PXYLP1Q8TE99 480 aa7.31□□□□□ -1.24
KDM3B-205ENST00000508386 MRIQ9BWK5 157 aa7.31□□□□□ -1.24
KDM3B-205ENST00000508386 GPHNQ9NQX3 736 aaPredicted RBP7.31□□□□□ -1.24
KDM3B-205ENST00000508386 ATRNL1Q5VV63 1379 aa7.31□□□□□ -1.24
KDM3B-205ENST00000508386 CXCL11O14625 94 aa7.3□□□□□ -1.24
KDM3B-205ENST00000508386 WDHD1O75717 1129 aaPredicted RBP7.3□□□□□ -1.24
KDM3B-205ENST00000508386 HDLBPQ00341 1268 aaKnown RBP7.3□□□□□ -1.24
KDM3B-205ENST00000508386 CHAF1AQ13111 956 aaPredicted RBP7.3□□□□□ -1.24
KDM3B-205ENST00000508386 UBE4AQ14139 1066 aa7.3□□□□□ -1.24
KDM3B-205ENST00000508386 NOL9Q5SY16 702 aaKnown RBP7.3□□□□□ -1.24
KDM3B-205ENST00000508386 BEND3Q5T5X7 828 aa7.3□□□□□ -1.24
KDM3B-205ENST00000508386 TMEM92Q6UXU6 159 aa7.3□□□□□ -1.24
KDM3B-205ENST00000508386 NECAB2Q7Z6G3 386 aa7.3□□□□□ -1.24
KDM3B-205ENST00000508386 TDHQ8IZJ6 230 aa7.3□□□□□ -1.24
KDM3B-205ENST00000508386 DNAAF4Q8WXU2 420 aa7.3□□□□□ -1.24
KDM3B-205ENST00000508386 ZNF341Q9BYN7 854 aa7.3□□□□□ -1.24
KDM3B-205ENST00000508386 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.3□□□□□ -1.24
KDM3B-205ENST00000508386 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.3□□□□□ -1.24
KDM3B-205ENST00000508386 FAM198AQ9UFP1 575 aa7.3□□□□□ -1.24
KDM3B-205ENST00000508386 GJD2Q9UKL4 321 aa7.3□□□□□ -1.24
KDM3B-205ENST00000508386 CHMP3Q9Y3E7 222 aa7.3□□□□□ -1.24
KDM3B-205ENST00000508386 PFASO15067 1338 aa7.29□□□□□ -1.24
KDM3B-205ENST00000508386 A0A0G2JLL6 359 aaPredicted RBP7.29□□□□□ -1.24
KDM3B-205ENST00000508386 C2orf72A6NCS6 295 aa7.29□□□□□ -1.24
KDM3B-205ENST00000508386 TCP10Q12799 353 aa7.29□□□□□ -1.24
KDM3B-205ENST00000508386 CDC42EP5Q6NZY7 148 aa7.29□□□□□ -1.24
KDM3B-205ENST00000508386 SH3BP5LQ7L8J4 393 aa7.29□□□□□ -1.24
KDM3B-205ENST00000508386 PRRT2Q7Z6L0 340 aaPredicted RBP7.29□□□□□ -1.24
KDM3B-205ENST00000508386 CCDC84Q86UT8 332 aaPredicted RBP7.29□□□□□ -1.24
KDM3B-205ENST00000508386 VGLL2Q8N8G2 317 aa7.29□□□□□ -1.24
KDM3B-205ENST00000508386 FAM151AQ8WW52 585 aa7.29□□□□□ -1.24
KDM3B-205ENST00000508386 TEKT1Q969V4 418 aa7.29□□□□□ -1.24
KDM3B-205ENST00000508386 FAM161BQ96MY7 647 aa7.29□□□□□ -1.24
KDM3B-205ENST00000508386 PARK7Q99497 189 aaKnown RBP7.29□□□□□ -1.24
KDM3B-205ENST00000508386 PRDM6Q9NQX0 595 aa7.29□□□□□ -1.24
KDM3B-205ENST00000508386 CNNM1Q9NRU3 951 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms