RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 USP42Q9H9J4 1324 aaKnown RBP8.7□□□□□ -1.02
NEDD9-208ENST00000504387 RNF40O75150 1001 aa8.69□□□□□ -1.02
NEDD9-208ENST00000504387 CCDC175P0C221 793 aa8.69□□□□□ -1.02
NEDD9-208ENST00000504387 CCDC102BQ68D86 513 aa8.69□□□□□ -1.02
NEDD9-208ENST00000504387 PROSER2Q86WR7 435 aaPredicted RBP8.69□□□□□ -1.02
NEDD9-208ENST00000504387 IGSF22Q8N9C0 903 aa8.69□□□□□ -1.02
NEDD9-208ENST00000504387 SIRT1Q96EB6 747 aa8.69□□□□□ -1.02
NEDD9-208ENST00000504387 TEX13AQ9BXU3 409 aaPredicted RBP8.69□□□□□ -1.02
NEDD9-208ENST00000504387 VPS16Q9H269 839 aa8.69□□□□□ -1.02
NEDD9-208ENST00000504387 EFCC1Q9HA90 598 aa8.69□□□□□ -1.02
NEDD9-208ENST00000504387 OVOS2A0A0J9YW53 1432 aa8.69□□□□□ -1.02
NEDD9-208ENST00000504387 OVOS2Q6IE36 1432 aa8.69□□□□□ -1.02
NEDD9-208ENST00000504387 CCDC151A5D8V7 595 aa8.69□□□□□ -1.02
NEDD9-208ENST00000504387 IFIT1P09914 478 aaKnown RBP8.69□□□□□ -1.02
NEDD9-208ENST00000504387 CASP14P31944 242 aa8.69□□□□□ -1.02
NEDD9-208ENST00000504387 PDE6BP35913 854 aa8.69□□□□□ -1.02
NEDD9-208ENST00000504387 SRGAP1Q7Z6B7 1085 aa8.69□□□□□ -1.02
NEDD9-208ENST00000504387 OSBP2Q969R2 916 aa8.69□□□□□ -1.02
NEDD9-208ENST00000504387 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.69□□□□□ -1.02
NEDD9-208ENST00000504387 CENPHQ9H3R5 247 aa8.69□□□□□ -1.02
NEDD9-208ENST00000504387 SEC31BQ9NQW1 1179 aa8.69□□□□□ -1.02
NEDD9-208ENST00000504387 DLC1Q96QB1 1528 aa8.69□□□□□ -1.02
NEDD9-208ENST00000504387 EIF3JO75822 258 aaKnown RBP8.69□□□□□ -1.02
NEDD9-208ENST00000504387 ATP2B2Q01814 1243 aa8.69□□□□□ -1.02
NEDD9-208ENST00000504387 KIF23Q02241 960 aaPredicted RBP8.69□□□□□ -1.02
NEDD9-208ENST00000504387 LRRC24Q50LG9 513 aa8.69□□□□□ -1.02
NEDD9-208ENST00000504387 SLC9C2Q5TAH2 1124 aa8.69□□□□□ -1.02
NEDD9-208ENST00000504387 LLPHQ9BRT6 129 aaKnown RBP8.69□□□□□ -1.02
NEDD9-208ENST00000504387 ANKRD26Q9UPS8 1709 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 KAT6BQ8WYB5 2073 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 ERLIN1O75477 346 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 TATP17735 454 aaPredicted RBP8.68□□□□□ -1.02
NEDD9-208ENST00000504387 ERCC3P19447 782 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 CMA1P23946 247 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 PTPN12Q05209 780 aaKnown RBP8.68□□□□□ -1.02
NEDD9-208ENST00000504387 KRT40Q6A162 431 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 ZNF790Q6PG37 636 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 SMARCC1Q92922 1105 aaPredicted RBP8.68□□□□□ -1.02
NEDD9-208ENST00000504387 SLC26A6Q9BXS9 759 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 STRN4Q9NRL3 753 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 SPATA31D1Q6ZQQ2 1576 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 CTAGE15A4D2H0 777 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 CTAGE9A4FU28 777 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 BTBD18B2RXH4 712 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 MYCNP04198 464 aaPredicted RBP8.68□□□□□ -1.02
NEDD9-208ENST00000504387 CTAGE8P0CG41 777 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 ATP5JP18859 108 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 MAGEA9P43362 315 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 GCKRQ14397 625 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 USPL1Q5W0Q7 1092 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 KRT28Q7Z3Y7 464 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 CTAGE6Q86UF2 777 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 CTAGE4Q8IX94 777 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 KBTBD3Q8NAB2 608 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 PUS3Q9BZE2 481 aaKnown RBP8.68□□□□□ -1.02
NEDD9-208ENST00000504387 UBXN6Q9BZV1 441 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 DDX21Q9NR30 783 aaKnown RBP eCLIP8.68□□□□□ -1.02
NEDD9-208ENST00000504387 HOOK1Q9UJC3 728 aaKnown RBP8.68□□□□□ -1.02
NEDD9-208ENST00000504387 TBX22Q9Y458 520 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 PTPRUQ92729 1446 aa8.68□□□□□ -1.02
NEDD9-208ENST00000504387 A0A1W2PQ27 194 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 A0A1W2PQ64 194 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 A0A1W2PQD8 194 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 NEURL1BA8MQ27 555 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 AKR1B15C9JRZ8 316 aaPredicted RBP8.67□□□□□ -1.02
NEDD9-208ENST00000504387 FGAP02671 866 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 IVLP07476 585 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 EXOSC10Q01780 885 aaKnown RBP8.67□□□□□ -1.02
NEDD9-208ENST00000504387 TRDNQ13061 729 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 AMOTQ4VCS5 1084 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 CTR9Q6PD62 1173 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 KCNH5Q8NCM2 988 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 NUP88Q99567 741 aaPredicted RBP8.67□□□□□ -1.02
NEDD9-208ENST00000504387 MAN1B1Q9UKM7 699 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 L1RE1Q9UN81 338 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 MAST3O60307 1309 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 B4E1Z4 1266 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 H0YHG0 523 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 ZEB2O60315 1214 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 ZPR1O75312 459 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 GPTP24298 496 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 CAGE1Q8TC20 777 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 CDC23Q9UJX2 597 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 FAM170AA1A519 330 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 ZNF185O15231 689 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 STX10O60499 249 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 HMGB1P09429 215 aaKnown RBP8.67□□□□□ -1.02
NEDD9-208ENST00000504387 TDO2P48775 406 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 ATP1A2P50993 1020 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 FXR1P51114 621 aaKnown RBP eCLIP8.67□□□□□ -1.02
NEDD9-208ENST00000504387 NR5A1Q13285 461 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 TRIM29Q14134 588 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 KCTD16Q68DU8 428 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 ANKLE2Q86XL3 938 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 BLZF1Q9H2G9 400 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 ADGRG1Q9Y653 693 aa8.67□□□□□ -1.02
NEDD9-208ENST00000504387 RNF225M0QZC1 329 aaPredicted RBP8.66□□□□□ -1.02
NEDD9-208ENST00000504387 MAP2K7O14733 419 aa8.66□□□□□ -1.02
NEDD9-208ENST00000504387 YEATS4O95619 227 aa8.66□□□□□ -1.02
NEDD9-208ENST00000504387 SSBP05455 408 aaKnown RBP eCLIP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms