RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 ZNF449Q6P9G9 518 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 SYNDIG1Q9H7V2 258 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 PANK3Q9H999 370 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 TMEM63CQ9P1W3 806 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 RAPGEF2Q9Y4G8 1499 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 EXOC5O00471 708 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 CHUKO15111 745 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 SUPT3HO75486 399 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 PDHA1P08559 390 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 ITIH3Q06033 890 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 PARP10Q53GL7 1025 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 ODF2Q5BJF6 829 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 NLRP9Q7RTR0 991 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 TADA2BQ86TJ2 420 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 CCDC170Q8IYT3 715 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 APPBP2Q92624 585 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 SMC6Q96SB8 1091 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 COMMD8Q9NX08 183 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 HDAC6Q9UBN7 1215 aa7□□□□□ -1.29
CLCN3-204ENST00000504131 ERICH3Q5RHP9 1530 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 MGEA5O60502 916 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 STAMBPO95630 424 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 IDEP14735 1019 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 PRIM1P49642 420 aaKnown RBP6.99□□□□□ -1.29
CLCN3-204ENST00000504131 ZC3H6P61129 1189 aaKnown RBP6.99□□□□□ -1.29
CLCN3-204ENST00000504131 RBM12BQ8IXT5 1001 aaKnown RBP6.99□□□□□ -1.29
CLCN3-204ENST00000504131 HYPKQ9NX55 129 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 TBC1D2BQ9UPU7 963 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 DMRT2Q9Y5R5 561 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 GOLGA8QA0A0J9YX86 632 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 GOLGA8OA6NCC3 632 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 GOLGA8NF8WBI6 632 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 SNX2O60749 519 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 KRT4P19013 534 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 MAN1A1P33908 653 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 GALNT6Q8NCL4 622 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 CDHR1Q96JP9 859 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 DUSP9Q99956 384 aaKnown RBP6.99□□□□□ -1.29
CLCN3-204ENST00000504131 BLOC1S6Q9UL45 172 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 SYNRGQ9UMZ2 1314 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 GOLGA8IPA6NC78 632 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 IFIT2P09913 472 aaKnown RBP6.99□□□□□ -1.29
CLCN3-204ENST00000504131 ICA1Q05084 483 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 KIF6Q6ZMV9 814 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 TRIM50Q86XT4 487 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.99□□□□□ -1.29
CLCN3-204ENST00000504131 GOLGA1Q92805 767 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 SEZ6LQ9BYH1 1024 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 KCTD5Q9NXV2 234 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 RAB3GAP2Q9H2M9 1393 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 TARSL2A2RTX5 802 aaKnown RBP6.99□□□□□ -1.29
CLCN3-204ENST00000504131 OLFM4Q6UX06 510 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 CLEC4GQ6UXB4 293 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 SMAD5Q99717 465 aaKnown RBP6.99□□□□□ -1.29
CLCN3-204ENST00000504131 CCT7Q99832 543 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 PDGFDQ9GZP0 370 aaPredicted RBP6.99□□□□□ -1.29
CLCN3-204ENST00000504131 BICC1Q9H694 974 aaKnown RBP6.99□□□□□ -1.29
CLCN3-204ENST00000504131 ABCF3Q9NUQ8 709 aa6.99□□□□□ -1.29
CLCN3-204ENST00000504131 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.99□□□□□ -1.29
CLCN3-204ENST00000504131 POTEFA5A3E0 1075 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 XPOTO43592 962 aaKnown RBP6.98□□□□□ -1.29
CLCN3-204ENST00000504131 ALOX15P16050 662 aaPredicted RBP6.98□□□□□ -1.29
CLCN3-204ENST00000504131 ARHGAP25P42331 645 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 NCBP1Q09161 790 aaKnown RBP6.98□□□□□ -1.29
CLCN3-204ENST00000504131 UBN1Q9NPG3 1134 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 RASSF10A6NK89 507 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 GCOM1H8Y6P7 765 aaPredicted RBP6.98□□□□□ -1.29
CLCN3-204ENST00000504131 TIPRLO75663 272 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 BAG2O95816 211 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 LRPAP1P30533 357 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 ASPHQ12797 758 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 CCDC184Q52MB2 194 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 FBXO18Q8NFZ0 1043 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 RETREG1Q9H6L5 497 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 ZMAT5Q9UDW3 170 aaKnown RBP6.98□□□□□ -1.29
CLCN3-204ENST00000504131 CNPY2Q9Y2B0 182 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 FGD5Q6ZNL6 1462 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 SEMA3EO15041 775 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 NDUFB5O43674 189 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 URI1O94763 535 aaPredicted RBP6.98□□□□□ -1.29
CLCN3-204ENST00000504131 GEMIN4P57678 1058 aaKnown RBP6.98□□□□□ -1.29
CLCN3-204ENST00000504131 AMPD3Q01432 767 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 IQCDQ96DY2 449 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 SLC7A5P2Q9GIP4 190 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 RRP1P56182 461 aaKnown RBP6.98□□□□□ -1.29
CLCN3-204ENST00000504131 ZBTB16Q05516 673 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 USP4Q13107 963 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 C10orf76Q5T2E6 689 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 PIP4K2CQ8TBX8 421 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 ANKRD49Q8WVL7 239 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 SUN2Q9UH99 717 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 FAN1Q9Y2M0 1017 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 SBNO2Q9Y2G9 1366 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 PYGLP06737 847 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 PSMA4P25789 261 aaKnown RBP6.98□□□□□ -1.29
CLCN3-204ENST00000504131 TUBA3EQ6PEY2 450 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 B4GALNT4Q76KP1 1039 aa6.98□□□□□ -1.29
CLCN3-204ENST00000504131 XPO4Q9C0E2 1151 aaKnown RBP6.98□□□□□ -1.29
CLCN3-204ENST00000504131 ALDH8A1Q9H2A2 487 aaPredicted RBP6.98□□□□□ -1.29
CLCN3-204ENST00000504131 PRKRIP1Q9H875 184 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 185.5 ms