RNA–Protein interactions for RNA: ENST00000504015.2

ALYREF-201, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 254 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-201ENST00000504015 ZNF330Q9Y3S2 320 aaPredicted RBP4.5□□□□□ -1.69
ALYREF-201ENST00000504015 SLC12A7Q9Y666 1083 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 CLIC4Q9Y696 253 aa4.5□□□□□ -1.69
ALYREF-201ENST00000504015 COL5A3P25940 1745 aaPredicted RBP4.49□□□□□ -1.69
ALYREF-201ENST00000504015 ZNF804BA4D1E1 1349 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 SPATA31A1Q5TZJ5 1347 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 UBN2Q6ZU65 1347 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 ROBO1Q9Y6N7 1651 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 A0A0G2JLW4 131 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 A0A1B0GVL5 298 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 GOLGA8AA7E2F4 631 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 GSG1L2A8MUP6 293 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 B4E1Z4 1266 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 IFIT3O14879 490 aaKnown RBP4.49□□□□□ -1.69
ALYREF-201ENST00000504015 CTIFO43310 598 aaKnown RBP4.49□□□□□ -1.69
ALYREF-201ENST00000504015 CAMTA2O94983 1202 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 BMP15O95972 392 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 POLR3DP05423 398 aaPredicted RBP4.49□□□□□ -1.69
ALYREF-201ENST00000504015 XBP1P17861 261 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 SYKP43405 635 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 PIP4K2BP78356 416 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 GUCY1B3Q02153 619 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 SEMA3FQ13275 785 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 GNL2Q13823 731 aaKnown RBP4.49□□□□□ -1.69
ALYREF-201ENST00000504015 RASGRF1Q13972 1273 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 WTAPQ15007 396 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 PTPAQ15257 358 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 SF3B3Q15393 1217 aaKnown RBP4.49□□□□□ -1.69
ALYREF-201ENST00000504015 TPRNQ4KMQ1 711 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 CAVIN4Q5BKX8 364 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 SLC10A5Q5PT55 438 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 SUSD4Q5VX71 490 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 RESP18Q5W5W9 173 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 KRT40Q6A162 431 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 C11orf57Q6ZUT1 292 aaPredicted RBP4.49□□□□□ -1.69
ALYREF-201ENST00000504015 VPS37DQ86XT2 251 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 TBC1D10CQ8IV04 446 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 NOSTRINQ8IVI9 506 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 DHX40Q8IX18 779 aaKnown RBP4.49□□□□□ -1.69
ALYREF-201ENST00000504015 FAM177A1Q8N128 213 aaPredicted RBP4.49□□□□□ -1.69
ALYREF-201ENST00000504015 PDCL2Q8N4E4 241 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 MAGEB6Q8N7X4 407 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 KRI1Q8N9T8 703 aaKnown RBP4.49□□□□□ -1.69
ALYREF-201ENST00000504015 TRIML1Q8N9V2 468 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 MLKLQ8NB16 471 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 CACTINQ8WUQ7 758 aaKnown RBP4.49□□□□□ -1.69
ALYREF-201ENST00000504015 ESR2Q92731 530 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 CCDC85AQ96PX6 553 aaPredicted RBP4.49□□□□□ -1.69
ALYREF-201ENST00000504015 MAP3K14Q99558 947 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 PYM1Q9BRP8 204 aaKnown RBP4.49□□□□□ -1.69
ALYREF-201ENST00000504015 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.49□□□□□ -1.69
ALYREF-201ENST00000504015 BRIP1Q9BX63 1249 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 RNF26Q9BY78 433 aaPredicted RBP4.49□□□□□ -1.69
ALYREF-201ENST00000504015 RBM28Q9NW13 759 aaKnown RBP4.49□□□□□ -1.69
ALYREF-201ENST00000504015 FAM13BQ9NYF5 915 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 DACH1Q9UI36 760 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 DENND2AQ9ULE3 1009 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 PYCARDQ9ULZ3 195 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 KIAA1551Q9HCM1 1747 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 ECM29Q5VYK3 1845 aa4.49□□□□□ -1.69
ALYREF-201ENST00000504015 A0A1B0GUL6 1792 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 DLEC1Q9Y238 1755 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 MYO5AQ9Y4I1 1855 aaKnown RBP4.48□□□□□ -1.69
ALYREF-201ENST00000504015 LOC102724428A0A0B4J2F2 783 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 MAGEB6P1A0A0J9YX57 407 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 PSDA5PKW4 1024 aaPredicted RBP4.48□□□□□ -1.69
ALYREF-201ENST00000504015 DTNBO60941 627 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 MBD4O95243 580 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 NTSR2O95665 410 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 MMP1P03956 469 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 FGRP09769 529 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 SKILP12757 684 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 TNNT1P13805 278 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 PFKFB1P16118 471 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 GTF2E1P29083 439 aaPredicted RBP4.48□□□□□ -1.69
ALYREF-201ENST00000504015 ATP6V1AP38606 617 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 CRKLP46109 303 aaKnown RBP4.48□□□□□ -1.69
ALYREF-201ENST00000504015 TDO2P48775 406 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 SIK1P57059 783 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 C1QTNF8P60827 252 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 MYL5Q02045 173 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 PTPN14Q15678 1187 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 RTN1Q16799 776 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 TPD52L1Q16890 204 aaPredicted RBP4.48□□□□□ -1.69
ALYREF-201ENST00000504015 CCDC178Q5BJE1 867 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 RC3H1Q5TC82 1133 aaKnown RBP4.48□□□□□ -1.69
ALYREF-201ENST00000504015 NT5DC1Q5TFE4 455 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 OLFM4Q6UX06 510 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 PI16Q6UXB8 463 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 KRBA2Q6ZNG9 492 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 FCHSD1Q86WN1 690 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 CERS3Q8IU89 383 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 ANKRD18AQ8IVF6 992 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 SYNE4Q8N205 404 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 CRACR2BQ8N4Y2 399 aaPredicted RBP4.48□□□□□ -1.69
ALYREF-201ENST00000504015 AOPEPQ8N6M6 819 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 FANCBQ8NB91 859 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 CCDC112Q8NEF3 446 aa4.48□□□□□ -1.69
ALYREF-201ENST00000504015 SYTL4Q96C24 671 aaPredicted RBP4.48□□□□□ -1.69
ALYREF-201ENST00000504015 UBAC1Q9BSL1 405 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms