RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 KRT1P04264 644 aa4.67□□□□□ -1.66
HMGB1P35-201ENST00000503360 PDE3AQ14432 1141 aa4.67□□□□□ -1.66
HMGB1P35-201ENST00000503360 SPRED3Q2MJR0 410 aa4.67□□□□□ -1.66
HMGB1P35-201ENST00000503360 ARHGAP27Q6ZUM4 889 aa4.67□□□□□ -1.66
HMGB1P35-201ENST00000503360 SYDE1Q6ZW31 735 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P35-201ENST00000503360 FBXO15Q8NCQ5 510 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P35-201ENST00000503360 CCDC97Q96F63 343 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P35-201ENST00000503360 DISC1Q9NRI5 854 aa4.67□□□□□ -1.66
HMGB1P35-201ENST00000503360 ECEL1O95672 775 aa4.66□□□□□ -1.66
HMGB1P35-201ENST00000503360 NEFLP07196 543 aa4.66□□□□□ -1.66
HMGB1P35-201ENST00000503360 MED14OSP0DP75 135 aa4.66□□□□□ -1.66
HMGB1P35-201ENST00000503360 CD96P40200 585 aa4.66□□□□□ -1.66
HMGB1P35-201ENST00000503360 CLCN7P51798 805 aa4.66□□□□□ -1.66
HMGB1P35-201ENST00000503360 SF3B2Q13435 895 aaKnown RBP4.66□□□□□ -1.66
HMGB1P35-201ENST00000503360 FAM214BQ7L5A3 538 aa4.66□□□□□ -1.66
HMGB1P35-201ENST00000503360 CCDC120Q96HB5 630 aa4.66□□□□□ -1.66
HMGB1P35-201ENST00000503360 GTF2IRD1Q9UHL9 959 aa4.66□□□□□ -1.66
HMGB1P35-201ENST00000503360 SERPINA10Q9UK55 444 aa4.66□□□□□ -1.66
HMGB1P35-201ENST00000503360 U3KQE9 123 aa4.66□□□□□ -1.66
HMGB1P35-201ENST00000503360 NFIBO00712 420 aa4.65□□□□□ -1.67
HMGB1P35-201ENST00000503360 FZD6O60353 706 aa4.65□□□□□ -1.67
HMGB1P35-201ENST00000503360 BUD31P41223 144 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P35-201ENST00000503360 ZP2Q05996 745 aa4.65□□□□□ -1.67
HMGB1P35-201ENST00000503360 PRPF40BQ6NWY9 871 aaKnown RBP4.65□□□□□ -1.67
HMGB1P35-201ENST00000503360 GTF3C2Q8WUA4 911 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P35-201ENST00000503360 LIN37Q96GY3 246 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P35-201ENST00000503360 LEFTY1O75610 366 aa4.64□□□□□ -1.67
HMGB1P35-201ENST00000503360 C1QTNF9P0C862 333 aa4.64□□□□□ -1.67
HMGB1P35-201ENST00000503360 SRFP11831 508 aa4.64□□□□□ -1.67
HMGB1P35-201ENST00000503360 IKZF1Q13422 519 aa4.64□□□□□ -1.67
HMGB1P35-201ENST00000503360 TMEM67Q5HYA8 995 aa4.64□□□□□ -1.67
HMGB1P35-201ENST00000503360 CYFIP1Q7L576 1253 aa4.64□□□□□ -1.67
HMGB1P35-201ENST00000503360 HOMEZQ8IX15 550 aa4.64□□□□□ -1.67
HMGB1P35-201ENST00000503360 SPACA3Q8IXA5 215 aa4.64□□□□□ -1.67
HMGB1P35-201ENST00000503360 PBXIP1Q96AQ6 731 aa4.64□□□□□ -1.67
HMGB1P35-201ENST00000503360 KIRREL1Q96J84 757 aa4.64□□□□□ -1.67
HMGB1P35-201ENST00000503360 HEXIM2Q96MH2 286 aaKnown RBP4.64□□□□□ -1.67
HMGB1P35-201ENST00000503360 CCDC86Q9H6F5 360 aaKnown RBP4.64□□□□□ -1.67
HMGB1P35-201ENST00000503360 LGR6Q9HBX8 967 aa4.64□□□□□ -1.67
HMGB1P35-201ENST00000503360 CD320Q9NPF0 282 aa4.64□□□□□ -1.67
HMGB1P35-201ENST00000503360 PITPNM2Q9BZ72 1349 aa4.64□□□□□ -1.67
HMGB1P35-201ENST00000503360 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P35-201ENST00000503360 GLDCP23378 1020 aa4.63□□□□□ -1.67
HMGB1P35-201ENST00000503360 GDNFP39905 211 aa4.63□□□□□ -1.67
HMGB1P35-201ENST00000503360 ERVK-24P63145 666 aa4.63□□□□□ -1.67
HMGB1P35-201ENST00000503360 TTLL4Q14679 1199 aa4.63□□□□□ -1.67
HMGB1P35-201ENST00000503360 PRR23BQ6ZRT6 265 aa4.63□□□□□ -1.67
HMGB1P35-201ENST00000503360 RNF214Q8ND24 703 aa4.63□□□□□ -1.67
HMGB1P35-201ENST00000503360 ZNF862O60290 1169 aa4.62□□□□□ -1.67
HMGB1P35-201ENST00000503360 GSTP1P09211 210 aaKnown RBP4.62□□□□□ -1.67
HMGB1P35-201ENST00000503360 LIG1P18858 919 aa4.62□□□□□ -1.67
HMGB1P35-201ENST00000503360 ECM1Q16610 540 aa4.62□□□□□ -1.67
HMGB1P35-201ENST00000503360 MPZL3Q6UWV2 235 aa4.62□□□□□ -1.67
HMGB1P35-201ENST00000503360 MTMR7Q9Y216 660 aa4.62□□□□□ -1.67
HMGB1P35-201ENST00000503360 TMEM253P0C7T8 217 aa4.61□□□□□ -1.67
HMGB1P35-201ENST00000503360 CTSWP56202 376 aa4.61□□□□□ -1.67
HMGB1P35-201ENST00000503360 FKBP4Q02790 459 aaKnown RBP eCLIP4.61□□□□□ -1.67
HMGB1P35-201ENST00000503360 AAMPQ13685 434 aa4.61□□□□□ -1.67
HMGB1P35-201ENST00000503360 KCNA10Q16322 511 aa4.61□□□□□ -1.67
HMGB1P35-201ENST00000503360 NKPD1Q17RQ9 610 aa4.61□□□□□ -1.67
HMGB1P35-201ENST00000503360 FYB2Q5VWT5 728 aa4.61□□□□□ -1.67
HMGB1P35-201ENST00000503360 CIAPIN1Q6FI81 312 aa4.61□□□□□ -1.67
HMGB1P35-201ENST00000503360 C22orf34Q6ZV56 151 aa4.61□□□□□ -1.67
HMGB1P35-201ENST00000503360 WDR89Q96FK6 387 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P35-201ENST00000503360 RNGTTO60942 597 aaKnown RBP4.6□□□□□ -1.67
HMGB1P35-201ENST00000503360 POLR3DP05423 398 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P35-201ENST00000503360 NEFMP07197 916 aa4.6□□□□□ -1.67
HMGB1P35-201ENST00000503360 INHBBP09529 407 aa4.6□□□□□ -1.67
HMGB1P35-201ENST00000503360 SSFA2P28290 1259 aa4.6□□□□□ -1.67
HMGB1P35-201ENST00000503360 ZC3H12AQ5D1E8 599 aaKnown RBP4.6□□□□□ -1.67
HMGB1P35-201ENST00000503360 KRTAP5-3Q6L8H2 238 aa4.6□□□□□ -1.67
HMGB1P35-201ENST00000503360 PDZD3Q86UT5 571 aa4.6□□□□□ -1.67
HMGB1P35-201ENST00000503360 NPAS4Q8IUM7 802 aa4.6□□□□□ -1.67
HMGB1P35-201ENST00000503360 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.6□□□□□ -1.67
HMGB1P35-201ENST00000503360 TOP6BLQ8N6T0 577 aa4.6□□□□□ -1.67
HMGB1P35-201ENST00000503360 ISL2Q96A47 359 aa4.6□□□□□ -1.67
HMGB1P35-201ENST00000503360 EHD4Q9H223 541 aa4.6□□□□□ -1.67
HMGB1P35-201ENST00000503360 ABCB6Q9NP58 842 aa4.6□□□□□ -1.67
HMGB1P35-201ENST00000503360 PRDM7Q9NQW5 492 aa4.6□□□□□ -1.67
HMGB1P35-201ENST00000503360 TRAK1Q9UPV9 953 aa4.6□□□□□ -1.67
HMGB1P35-201ENST00000503360 MAPK8IP1Q9UQF2 711 aa4.6□□□□□ -1.67
HMGB1P35-201ENST00000503360 JAG2Q9Y219 1238 aa4.6□□□□□ -1.67
HMGB1P35-201ENST00000503360 NPIPB6E9PJ23 425 aa4.59□□□□□ -1.67
HMGB1P35-201ENST00000503360 HCLS1P14317 486 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P35-201ENST00000503360 ITIH2P19823 946 aa4.59□□□□□ -1.67
HMGB1P35-201ENST00000503360 PPP2R3AQ06190 1150 aa4.59□□□□□ -1.67
HMGB1P35-201ENST00000503360 DBX2Q6ZNG2 339 aa4.59□□□□□ -1.67
HMGB1P35-201ENST00000503360 PRDM10Q9NQV6 1147 aa4.59□□□□□ -1.67
HMGB1P35-201ENST00000503360 C19orf73Q9NVV2 129 aa4.59□□□□□ -1.67
HMGB1P35-201ENST00000503360 CACNA2D2Q9NY47 1150 aa4.59□□□□□ -1.67
HMGB1P35-201ENST00000503360 TMEM238LA0A1B0GVL6 79 aa4.58□□□□□ -1.68
HMGB1P35-201ENST00000503360 GNAT3A8MTJ3 354 aa4.58□□□□□ -1.68
HMGB1P35-201ENST00000503360 SLC26A8Q96RN1 970 aa4.58□□□□□ -1.68
HMGB1P35-201ENST00000503360 DNAJC25Q9H1X3 360 aa4.58□□□□□ -1.68
HMGB1P35-201ENST00000503360 TCAF2A6NFQ2 919 aa4.57□□□□□ -1.68
HMGB1P35-201ENST00000503360 CPNE3O75131 537 aaKnown RBP4.57□□□□□ -1.68
HMGB1P35-201ENST00000503360 XRCC5P13010 732 aaKnown RBP4.57□□□□□ -1.68
HMGB1P35-201ENST00000503360 HOXA5P20719 270 aa4.57□□□□□ -1.68
HMGB1P35-201ENST00000503360 PDE3BQ13370 1112 aa4.57□□□□□ -1.68
HMGB1P35-201ENST00000503360 SCARA3Q6AZY7 606 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms