RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 GNL2Q13823 731 aaKnown RBP6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 IQCB1Q15051 598 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 LEKR1Q6ZMV7 388 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 CLASRPQ8N2M8 674 aaKnown RBP6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 CTCFLQ8NI51 663 aaPredicted RBP6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 ZBTB10Q96DT7 871 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 KIF9Q9HAQ2 790 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 MCM8Q9UJA3 840 aa6.63□□□□□ -1.35
SOX2-OT-218ENST00000498731 LGR5O75473 907 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 ERLIN2O94905 339 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 PEX19P40855 299 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 PDE1AP54750 535 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 KCNA1Q09470 495 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 AACSQ86V21 672 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 MNS1Q8NEH6 495 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 MORC4Q8TE76 937 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 STAG1Q8WVM7 1258 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 TMX4Q9H1E5 349 aaPredicted RBP6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 DDX21Q9NR30 783 aaKnown RBP eCLIP6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 DLG5Q8TDM6 1919 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 CCDC196A0A1B0GTZ2 297 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 STX6O43752 255 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 RTN2O75298 545 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 MYBL2P10244 700 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 APOBRQ0VD83 1088 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 PSMD2Q13200 908 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 TDRD7Q8NHU6 1098 aaKnown RBP6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 GDAP1L1Q96MZ0 367 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 GNL3LQ9NVN8 582 aaKnown RBP6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 PSD3Q9NYI0 1048 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 SAMM50Q9Y512 469 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 PXDNQ92626 1479 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 KIF24Q5T7B8 1368 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 WDR33Q9C0J8 1336 aaKnown RBP6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 XRN1Q8IZH2 1706 aaKnown RBP6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 MAP2K7O14733 419 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 APBA3O96018 575 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 CCT5P48643 541 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 MAP3K11Q16584 847 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 TBC1D25Q3MII6 688 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 TTLL7Q6ZT98 887 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 RHPN1Q8TCX5 695 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 HINFPQ9BQA5 517 aa6.62□□□□□ -1.35
SOX2-OT-218ENST00000498731 ANKRD33BA6NCL7 494 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 ENO4A6NNW6 628 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 GRM8O00222 908 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 BEND3Q5T5X7 828 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 GIPC2Q8TF65 315 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 SUCLG2Q96I99 432 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 NUP62CLQ9H1M0 184 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 BOLA2Q9H3K6 86 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 ASAP1Q9ULH1 1129 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 MTMR6Q9Y217 621 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 LRRIQ3A6PVS8 624 aaPredicted RBP6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 DCCP43146 1447 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 RUFY3Q7L099 469 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 NECAB1Q8N987 351 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 TBC1D22AQ8WUA7 517 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 ARHGEF1Q92888 912 aaKnown RBP6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 FTOQ9C0B1 505 aaKnown RBP eCLIP6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 FAM204AQ9H8W3 233 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 FMN2Q9NZ56 1722 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 KLF15Q9UIH9 416 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 SOS1Q07889 1333 aaPredicted RBP6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 TNS3Q68CZ2 1445 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 EIF4E1BA6NMX2 242 aaKnown RBP6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 C21orf2O43822 256 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 RECKO95980 971 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 TPM1P09493 284 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 PDHBP11177 359 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 SCNN1AP37088 669 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 KCNQ4P56696 695 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 NBPF9Q3BBW0 867 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 VPS53Q5VIR6 699 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 CDC37L1Q7L3B6 337 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 DHX40Q8IX18 779 aaKnown RBP6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 DNAJC10Q8IXB1 793 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 EFCAB13Q8IY85 973 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 RASEFQ8IZ41 740 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 ITFG2Q969R8 447 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 PGBD1Q96JS3 809 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 NDUFB9Q9Y6M9 179 aa6.61□□□□□ -1.35
SOX2-OT-218ENST00000498731 WDR17Q8IZU2 1322 aa6.6□□□□□ -1.35
SOX2-OT-218ENST00000498731 VPS37CA5D8V6 355 aaPredicted RBP6.6□□□□□ -1.35
SOX2-OT-218ENST00000498731 EGFLAMQ63HQ2 1017 aa6.6□□□□□ -1.35
SOX2-OT-218ENST00000498731 GBP6Q6ZN66 633 aa6.6□□□□□ -1.35
SOX2-OT-218ENST00000498731 CCDC83Q8IWF9 413 aa6.6□□□□□ -1.35
SOX2-OT-218ENST00000498731 TSPYL2Q9H2G4 693 aaPredicted RBP6.6□□□□□ -1.35
SOX2-OT-218ENST00000498731 TNMDQ9H2S6 317 aa6.6□□□□□ -1.35
SOX2-OT-218ENST00000498731 ANKZF1Q9H8Y5 726 aa6.6□□□□□ -1.35
SOX2-OT-218ENST00000498731 TBC1D2BQ9UPU7 963 aa6.6□□□□□ -1.35
SOX2-OT-218ENST00000498731 NRKQ7Z2Y5 1582 aa6.6□□□□□ -1.35
SOX2-OT-218ENST00000498731 A0A087WUV0 522 aaPredicted RBP6.6□□□□□ -1.35
SOX2-OT-218ENST00000498731 ERC2O15083 957 aa6.6□□□□□ -1.35
SOX2-OT-218ENST00000498731 MCCD1P59942 119 aaPredicted RBP6.6□□□□□ -1.35
SOX2-OT-218ENST00000498731 GRIK3Q13003 919 aa6.6□□□□□ -1.35
SOX2-OT-218ENST00000498731 BEND6Q5SZJ8 279 aaPredicted RBP6.6□□□□□ -1.35
SOX2-OT-218ENST00000498731 FAM228AQ86W67 206 aa6.6□□□□□ -1.35
SOX2-OT-218ENST00000498731 HOMER1Q86YM7 354 aa6.6□□□□□ -1.35
SOX2-OT-218ENST00000498731 LINS1Q8NG48 757 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms