RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 AKTIPQ9H8T0 292 aa7.68□□□□□ -1.18
VPS36-206ENST00000497149 SUGCTQ9HAC7 445 aa7.68□□□□□ -1.18
VPS36-206ENST00000497149 CYP4F12Q9HCS2 524 aa7.68□□□□□ -1.18
VPS36-206ENST00000497149 ALX3O95076 343 aa7.67□□□□□ -1.18
VPS36-206ENST00000497149 CRKP46108 304 aa7.67□□□□□ -1.18
VPS36-206ENST00000497149 CDK8P49336 464 aa7.67□□□□□ -1.18
VPS36-206ENST00000497149 RPL6Q02878 288 aaKnown RBP7.67□□□□□ -1.18
VPS36-206ENST00000497149 APOBRQ0VD83 1088 aa7.67□□□□□ -1.18
VPS36-206ENST00000497149 MPP2Q14168 576 aa7.67□□□□□ -1.18
VPS36-206ENST00000497149 INPP5AQ14642 412 aa7.67□□□□□ -1.18
VPS36-206ENST00000497149 ZC3H12AQ5D1E8 599 aaKnown RBP7.67□□□□□ -1.18
VPS36-206ENST00000497149 AGGF1Q8N302 714 aaeCLIP7.67□□□□□ -1.18
VPS36-206ENST00000497149 RASGRP4Q8TDF6 673 aa7.67□□□□□ -1.18
VPS36-206ENST00000497149 LRRC3Q9BY71 257 aa7.67□□□□□ -1.18
VPS36-206ENST00000497149 PCDHGC5Q9Y5F6 944 aa7.67□□□□□ -1.18
VPS36-206ENST00000497149 GFRA2O00451 464 aa7.66□□□□□ -1.18
VPS36-206ENST00000497149 TLR3O15455 904 aaKnown RBP7.66□□□□□ -1.18
VPS36-206ENST00000497149 ADAM23O75077 832 aa7.66□□□□□ -1.18
VPS36-206ENST00000497149 BPNT1O95861 308 aa7.66□□□□□ -1.18
VPS36-206ENST00000497149 AKAP4Q5JQC9 854 aa7.66□□□□□ -1.18
VPS36-206ENST00000497149 SLITRK4Q8IW52 837 aa7.66□□□□□ -1.18
VPS36-206ENST00000497149 C12orf50Q8NA57 414 aaPredicted RBP7.66□□□□□ -1.18
VPS36-206ENST00000497149 NKD1Q969G9 470 aa7.66□□□□□ -1.18
VPS36-206ENST00000497149 SPATA32Q96LK8 384 aa7.66□□□□□ -1.18
VPS36-206ENST00000497149 PPP1R9AQ9ULJ8 1098 aa7.66□□□□□ -1.18
VPS36-206ENST00000497149 SNCAIPQ9Y6H5 919 aa7.66□□□□□ -1.18
VPS36-206ENST00000497149 KRBA1A5PL33 1030 aa7.65□□□□□ -1.18
VPS36-206ENST00000497149 ID3Q02535 119 aa7.65□□□□□ -1.18
VPS36-206ENST00000497149 SOX4Q06945 474 aaPredicted RBP7.65□□□□□ -1.18
VPS36-206ENST00000497149 CWF19L2Q2TBE0 894 aaKnown RBP7.65□□□□□ -1.18
VPS36-206ENST00000497149 SEZ6Q53EL9 994 aa7.65□□□□□ -1.18
VPS36-206ENST00000497149 LRFN4Q6PJG9 635 aa7.65□□□□□ -1.18
VPS36-206ENST00000497149 HDXQ7Z353 690 aa7.65□□□□□ -1.18
VPS36-206ENST00000497149 VPS37DQ86XT2 251 aa7.65□□□□□ -1.18
VPS36-206ENST00000497149 WFDC12Q8WWY7 111 aa7.65□□□□□ -1.18
VPS36-206ENST00000497149 PLPPR2Q96GM1 343 aa7.65□□□□□ -1.18
VPS36-206ENST00000497149 DCDC2CA8MYV0 355 aa7.64□□□□□ -1.19
VPS36-206ENST00000497149 TIAF1O95411 115 aa7.64□□□□□ -1.19
VPS36-206ENST00000497149 ADH5P11766 374 aa7.64□□□□□ -1.19
VPS36-206ENST00000497149 DRD2P14416 443 aa7.64□□□□□ -1.19
VPS36-206ENST00000497149 NOS3P29474 1203 aa7.64□□□□□ -1.19
VPS36-206ENST00000497149 IREB2P48200 963 aaKnown RBP7.64□□□□□ -1.19
VPS36-206ENST00000497149 ADGRE1Q14246 886 aa7.64□□□□□ -1.19
VPS36-206ENST00000497149 WIPI1Q5MNZ9 446 aaPredicted RBP7.64□□□□□ -1.19
VPS36-206ENST00000497149 ANKRD34AQ69YU3 496 aa7.64□□□□□ -1.19
VPS36-206ENST00000497149 FDX2Q6P4F2 183 aa7.64□□□□□ -1.19
VPS36-206ENST00000497149 Q6ZS46 218 aa7.64□□□□□ -1.19
VPS36-206ENST00000497149 CYFIP1Q7L576 1253 aa7.64□□□□□ -1.19
VPS36-206ENST00000497149 REC114Q7Z4M0 266 aa7.64□□□□□ -1.19
VPS36-206ENST00000497149 C12orf40Q86WS4 652 aa7.64□□□□□ -1.19
VPS36-206ENST00000497149 ELMO3Q96BJ8 720 aa7.64□□□□□ -1.19
VPS36-206ENST00000497149 GMLQ99445 158 aa7.64□□□□□ -1.19
VPS36-206ENST00000497149 CRIM1Q9NZV1 1036 aa7.64□□□□□ -1.19
VPS36-206ENST00000497149 CSADQ9Y600 493 aa7.64□□□□□ -1.19
VPS36-206ENST00000497149 TMPRSS2O15393 492 aa7.63□□□□□ -1.19
VPS36-206ENST00000497149 ATF4P18848 351 aaPredicted RBP7.63□□□□□ -1.19
VPS36-206ENST00000497149 ERVK-24P63145 666 aa7.63□□□□□ -1.19
VPS36-206ENST00000497149 ARID5AQ03989 594 aa7.63□□□□□ -1.19
VPS36-206ENST00000497149 RING1Q06587 406 aa7.63□□□□□ -1.19
VPS36-206ENST00000497149 MBTPS1Q14703 1052 aa7.63□□□□□ -1.19
VPS36-206ENST00000497149 SEC16BQ96JE7 1060 aa7.63□□□□□ -1.19
VPS36-206ENST00000497149 CEP41Q9BYV8 373 aa7.63□□□□□ -1.19
VPS36-206ENST00000497149 BRMS1Q9HCU9 246 aa7.63□□□□□ -1.19
VPS36-206ENST00000497149 DISC1Q9NRI5 854 aa7.63□□□□□ -1.19
VPS36-206ENST00000497149 GINM1Q9NU53 330 aa7.63□□□□□ -1.19
VPS36-206ENST00000497149 EFR3BQ9Y2G0 817 aa7.63□□□□□ -1.19
VPS36-206ENST00000497149 GLB1P16278 677 aa7.62□□□□□ -1.19
VPS36-206ENST00000497149 COL9A2Q14055 689 aaPredicted RBP7.62□□□□□ -1.19
VPS36-206ENST00000497149 FANCD2OSQ96PS1 177 aa7.62□□□□□ -1.19
VPS36-206ENST00000497149 GSX1Q9H4S2 264 aaPredicted RBP7.62□□□□□ -1.19
VPS36-206ENST00000497149 AP4E1Q9UPM8 1137 aa7.62□□□□□ -1.19
VPS36-206ENST00000497149 HIF3AQ9Y2N7 669 aa7.62□□□□□ -1.19
VPS36-206ENST00000497149 POLR3KQ9Y2Y1 108 aaPredicted RBP7.62□□□□□ -1.19
VPS36-206ENST00000497149 TACC3Q9Y6A5 838 aa7.62□□□□□ -1.19
VPS36-206ENST00000497149 DNAJA1P31689 397 aaKnown RBP7.61□□□□□ -1.19
VPS36-206ENST00000497149 MCM4P33991 863 aa7.61□□□□□ -1.19
VPS36-206ENST00000497149 SOX9P48436 509 aa7.61□□□□□ -1.19
VPS36-206ENST00000497149 PPM1JQ5JR12 505 aa7.61□□□□□ -1.19
VPS36-206ENST00000497149 DYMQ7RTS9 669 aa7.61□□□□□ -1.19
VPS36-206ENST00000497149 REXO1Q8N1G1 1221 aaKnown RBP7.61□□□□□ -1.19
VPS36-206ENST00000497149 C2CD4AQ8NCU7 369 aaPredicted RBP7.61□□□□□ -1.19
VPS36-206ENST00000497149 UBL7Q96S82 380 aaPredicted RBP7.61□□□□□ -1.19
VPS36-206ENST00000497149 ATXN3LQ9H3M9 355 aa7.61□□□□□ -1.19
VPS36-206ENST00000497149 PRR36Q9H6K5 1346 aa7.6□□□□□ -1.19
VPS36-206ENST00000497149 C1QTNF9BB2RNN3 333 aa7.6□□□□□ -1.19
VPS36-206ENST00000497149 SART1O43290 800 aaKnown RBP7.6□□□□□ -1.19
VPS36-206ENST00000497149 GRIN3BO60391 1043 aa7.6□□□□□ -1.19
VPS36-206ENST00000497149 CHRNA4P43681 627 aa7.6□□□□□ -1.19
VPS36-206ENST00000497149 PREPP48147 710 aa7.6□□□□□ -1.19
VPS36-206ENST00000497149 NASPP49321 788 aaPredicted RBP7.6□□□□□ -1.19
VPS36-206ENST00000497149 ZNF165P49910 485 aa7.6□□□□□ -1.19
VPS36-206ENST00000497149 CD163Q86VB7 1156 aa7.6□□□□□ -1.19
VPS36-206ENST00000497149 TXNRD3Q86VQ6 643 aa7.6□□□□□ -1.19
VPS36-206ENST00000497149 DZIP1LQ8IYY4 767 aaKnown RBP7.6□□□□□ -1.19
VPS36-206ENST00000497149 RNF214Q8ND24 703 aa7.6□□□□□ -1.19
VPS36-206ENST00000497149 SREK1Q8WXA9 508 aaKnown RBP7.6□□□□□ -1.19
VPS36-206ENST00000497149 FAM46AQ96IP4 442 aaKnown RBP7.6□□□□□ -1.19
VPS36-206ENST00000497149 EHMT1Q9H9B1 1298 aa7.6□□□□□ -1.19
VPS36-206ENST00000497149 PRKAG2Q9UGJ0 569 aa7.6□□□□□ -1.19
VPS36-206ENST00000497149 ACTL7BQ9Y614 415 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms