RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 NPAS4Q8IUM7 802 aa9.68□□□□□ -0.86
MDM2-220ENST00000496959 GATA6Q92908 595 aa9.68□□□□□ -0.86
MDM2-220ENST00000496959 C1GALT1Q9NS00 363 aa9.68□□□□□ -0.86
MDM2-220ENST00000496959 FAM170BA6NMN3 283 aa9.67□□□□□ -0.86
MDM2-220ENST00000496959 CELA3AP09093 270 aa9.67□□□□□ -0.86
MDM2-220ENST00000496959 HCLS1P14317 486 aaPredicted RBP9.67□□□□□ -0.86
MDM2-220ENST00000496959 FOSL1P15407 271 aa9.67□□□□□ -0.86
MDM2-220ENST00000496959 ERVK-24P63145 666 aa9.67□□□□□ -0.86
MDM2-220ENST00000496959 CCDC27Q2M243 656 aa9.67□□□□□ -0.86
MDM2-220ENST00000496959 PCNX4Q63HM2 1172 aa9.67□□□□□ -0.86
MDM2-220ENST00000496959 SCARA3Q6AZY7 606 aa9.67□□□□□ -0.86
MDM2-220ENST00000496959 DTX1Q86Y01 620 aa9.67□□□□□ -0.86
MDM2-220ENST00000496959 CACNA2D2Q9NY47 1150 aa9.67□□□□□ -0.86
MDM2-220ENST00000496959 CYP26A1O43174 497 aa9.66□□□□□ -0.86
MDM2-220ENST00000496959 DYNC1LI2O43237 492 aaPredicted RBP9.66□□□□□ -0.86
MDM2-220ENST00000496959 ERCC3P19447 782 aa9.66□□□□□ -0.86
MDM2-220ENST00000496959 SPINK2P20155 84 aa9.66□□□□□ -0.86
MDM2-220ENST00000496959 HOXA10P31260 410 aaPredicted RBP9.66□□□□□ -0.86
MDM2-220ENST00000496959 RNF214Q8ND24 703 aa9.66□□□□□ -0.86
MDM2-220ENST00000496959 SSU72Q9NP77 194 aaKnown RBP9.66□□□□□ -0.86
MDM2-220ENST00000496959 PARP2Q9UGN5 583 aa9.66□□□□□ -0.86
MDM2-220ENST00000496959 PCOLCE2Q9UKZ9 415 aa9.66□□□□□ -0.86
MDM2-220ENST00000496959 XPCQ01831 940 aaPredicted RBP9.65□□□□□ -0.86
MDM2-220ENST00000496959 OGFOD3Q6PK18 319 aa9.65□□□□□ -0.86
MDM2-220ENST00000496959 MPRIPQ6WCQ1 1025 aa9.65□□□□□ -0.86
MDM2-220ENST00000496959 RNF19AQ9NV58 838 aa9.65□□□□□ -0.86
MDM2-220ENST00000496959 PSMD2Q13200 908 aa9.64□□□□□ -0.87
MDM2-220ENST00000496959 CYP27C1Q4G0S4 372 aa9.64□□□□□ -0.87
MDM2-220ENST00000496959 ZNF765Q7L2R6 523 aa9.64□□□□□ -0.87
MDM2-220ENST00000496959 PICK1Q9NRD5 415 aa9.64□□□□□ -0.87
MDM2-220ENST00000496959 PCDHA4Q9UN74 947 aa9.64□□□□□ -0.87
MDM2-220ENST00000496959 WNT11O96014 354 aa9.63□□□□□ -0.87
MDM2-220ENST00000496959 CCDC85BQ15834 202 aaPredicted RBP9.63□□□□□ -0.87
MDM2-220ENST00000496959 DCDC2CA8MYV0 355 aa9.62□□□□□ -0.87
MDM2-220ENST00000496959 LMNB1P20700 586 aa9.62□□□□□ -0.87
MDM2-220ENST00000496959 DAB2P98082 770 aa9.62□□□□□ -0.87
MDM2-220ENST00000496959 CDK5R2Q13319 367 aa9.62□□□□□ -0.87
MDM2-220ENST00000496959 RASIP1Q5U651 963 aa9.62□□□□□ -0.87
MDM2-220ENST00000496959 TTBK2Q6IQ55 1244 aa9.62□□□□□ -0.87
MDM2-220ENST00000496959 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.62□□□□□ -0.87
MDM2-220ENST00000496959 ISL2Q96A47 359 aa9.62□□□□□ -0.87
MDM2-220ENST00000496959 LRRC4CQ9HCJ2 640 aa9.62□□□□□ -0.87
MDM2-220ENST00000496959 CSADQ9Y600 493 aa9.62□□□□□ -0.87
MDM2-220ENST00000496959 NEFMP07197 916 aa9.61□□□□□ -0.87
MDM2-220ENST00000496959 MSMPQ1L6U9 139 aa9.61□□□□□ -0.87
MDM2-220ENST00000496959 PPM1JQ5JR12 505 aa9.61□□□□□ -0.87
MDM2-220ENST00000496959 ELMO3Q96BJ8 720 aa9.61□□□□□ -0.87
MDM2-220ENST00000496959 FAM87AP0C7U9 286 aa9.6□□□□□ -0.87
MDM2-220ENST00000496959 GP2P55259 537 aaKnown RBP9.6□□□□□ -0.87
MDM2-220ENST00000496959 FBXO33Q7Z6M2 555 aa9.6□□□□□ -0.87
MDM2-220ENST00000496959 C12orf40Q86WS4 652 aa9.6□□□□□ -0.87
MDM2-220ENST00000496959 ANGEL1Q9UNK9 670 aaKnown RBP9.6□□□□□ -0.87
MDM2-220ENST00000496959 FANCGO15287 622 aa9.59□□□□□ -0.87
MDM2-220ENST00000496959 RPS26P62854 115 aaKnown RBP9.59□□□□□ -0.87
MDM2-220ENST00000496959 TMC4Q7Z404 712 aa9.59□□□□□ -0.87
MDM2-220ENST00000496959 ITGAEP38570 1179 aa9.58□□□□□ -0.88
MDM2-220ENST00000496959 CDC37L1Q7L3B6 337 aa9.58□□□□□ -0.88
MDM2-220ENST00000496959 BSDC1Q9NW68 430 aaPredicted RBP9.58□□□□□ -0.88
MDM2-220ENST00000496959 ADAMTS4O75173 837 aa9.57□□□□□ -0.88
MDM2-220ENST00000496959 RLBP1P12271 317 aa9.57□□□□□ -0.88
MDM2-220ENST00000496959 RING1Q06587 406 aa9.57□□□□□ -0.88
MDM2-220ENST00000496959 TAF1CQ15572 869 aaPredicted RBP9.57□□□□□ -0.88
MDM2-220ENST00000496959 MEI1Q5TIA1 1274 aa9.57□□□□□ -0.88
MDM2-220ENST00000496959 HDXQ7Z353 690 aa9.57□□□□□ -0.88
MDM2-220ENST00000496959 VSIG10LQ86VR7 867 aa9.57□□□□□ -0.88
MDM2-220ENST00000496959 KCT2Q8NC54 265 aa9.57□□□□□ -0.88
MDM2-220ENST00000496959 ZC3H7BQ9UGR2 993 aaKnown RBP9.57□□□□□ -0.88
MDM2-220ENST00000496959 SORBS3O60504 671 aa9.56□□□□□ -0.88
MDM2-220ENST00000496959 PRNPP04156 253 aa9.56□□□□□ -0.88
MDM2-220ENST00000496959 ZBTB37Q5TC79 503 aa9.56□□□□□ -0.88
MDM2-220ENST00000496959 FAM161BQ96MY7 647 aa9.56□□□□□ -0.88
MDM2-220ENST00000496959 DUSP23Q9BVJ7 150 aa9.56□□□□□ -0.88
MDM2-220ENST00000496959 MRS2Q9HD23 443 aa9.56□□□□□ -0.88
MDM2-220ENST00000496959 CCDC39Q9UFE4 941 aa9.56□□□□□ -0.88
MDM2-220ENST00000496959 SNCAIPQ9Y6H5 919 aa9.56□□□□□ -0.88
MDM2-220ENST00000496959 LIG3P49916 1009 aa9.55□□□□□ -0.88
MDM2-220ENST00000496959 ST13P50502 369 aaKnown RBP9.55□□□□□ -0.88
MDM2-220ENST00000496959 PTPN11Q06124 597 aaPredicted RBP9.55□□□□□ -0.88
MDM2-220ENST00000496959 INPP5AQ14642 412 aa9.55□□□□□ -0.88
MDM2-220ENST00000496959 MAP3K11Q16584 847 aa9.55□□□□□ -0.88
MDM2-220ENST00000496959 ZNF507Q8TCN5 953 aa9.55□□□□□ -0.88
MDM2-220ENST00000496959 GAL3ST3Q96A11 431 aa9.55□□□□□ -0.88
MDM2-220ENST00000496959 PSMG3-AS1Q96PY0 264 aa9.55□□□□□ -0.88
MDM2-220ENST00000496959 NOC4LQ9BVI4 516 aaKnown RBP9.55□□□□□ -0.88
MDM2-220ENST00000496959 OAS3Q9Y6K5 1087 aaKnown RBP9.55□□□□□ -0.88
MDM2-220ENST00000496959 PRAMEF27A3QJZ7 478 aa9.54□□□□□ -0.88
MDM2-220ENST00000496959 NTF4P34130 210 aa9.54□□□□□ -0.88
MDM2-220ENST00000496959 LRFN4Q6PJG9 635 aa9.54□□□□□ -0.88
MDM2-220ENST00000496959 AGMOQ6ZNB7 445 aa9.54□□□□□ -0.88
MDM2-220ENST00000496959 ARHGAP27Q6ZUM4 889 aa9.54□□□□□ -0.88
MDM2-220ENST00000496959 TOP6BLQ8N6T0 577 aa9.54□□□□□ -0.88
MDM2-220ENST00000496959 PLPPR2Q96GM1 343 aa9.54□□□□□ -0.88
MDM2-220ENST00000496959 ZBTB7CA1YPR0 619 aa9.53□□□□□ -0.88
MDM2-220ENST00000496959 LEFTY1O75610 366 aa9.53□□□□□ -0.88
MDM2-220ENST00000496959 IRAK1P51617 712 aa9.53□□□□□ -0.88
MDM2-220ENST00000496959 TAGLNQ01995 201 aaKnown RBP9.53□□□□□ -0.88
MDM2-220ENST00000496959 CRELD1Q96HD1 420 aa9.53□□□□□ -0.88
MDM2-220ENST00000496959 FBXL18Q96ME1 805 aa9.53□□□□□ -0.88
MDM2-220ENST00000496959 VTI1BQ9UEU0 232 aa9.53□□□□□ -0.88
MDM2-220ENST00000496959 USP31Q70CQ4 1352 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms