RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 SSRP1Q08945 709 aaKnown RBP13.36□□□□□ -0.27
CDCA7-208ENST00000496441 WTAPQ15007 396 aa13.36□□□□□ -0.27
CDCA7-208ENST00000496441 CELF1Q92879 486 aaKnown RBP13.36□□□□□ -0.27
CDCA7-208ENST00000496441 POLR3EQ9NVU0 708 aa13.36□□□□□ -0.27
CDCA7-208ENST00000496441 KIAA1468Q9P260 1216 aa13.36□□□□□ -0.27
CDCA7-208ENST00000496441 SRP68Q9UHB9 627 aaKnown RBP13.36□□□□□ -0.27
CDCA7-208ENST00000496441 MTMR7Q9Y216 660 aa13.36□□□□□ -0.27
CDCA7-208ENST00000496441 MYH15Q9Y2K3 1946 aa13.36□□□□□ -0.27
CDCA7-208ENST00000496441 RRP9O43818 475 aaKnown RBP13.36□□□□□ -0.27
CDCA7-208ENST00000496441 CDKL5O76039 1030 aa13.36□□□□□ -0.27
CDCA7-208ENST00000496441 NR5A1Q13285 461 aa13.36□□□□□ -0.27
CDCA7-208ENST00000496441 PNOCQ13519 176 aa13.36□□□□□ -0.27
CDCA7-208ENST00000496441 BRAPQ7Z569 592 aa13.36□□□□□ -0.27
CDCA7-208ENST00000496441 C8orf37Q96NL8 207 aa13.36□□□□□ -0.27
CDCA7-208ENST00000496441 SYKP43405 635 aa13.35□□□□□ -0.27
CDCA7-208ENST00000496441 ANKRD18AQ8IVF6 992 aa13.35□□□□□ -0.27
CDCA7-208ENST00000496441 TMEM87BQ96K49 555 aa13.35□□□□□ -0.27
CDCA7-208ENST00000496441 ZNF512BQ96KM6 892 aaPredicted RBP13.35□□□□□ -0.27
CDCA7-208ENST00000496441 UBAC1Q9BSL1 405 aa13.35□□□□□ -0.27
CDCA7-208ENST00000496441 TPD52L1Q16890 204 aaPredicted RBP13.35□□□□□ -0.27
CDCA7-208ENST00000496441 GRIN1Q05586 938 aa13.34□□□□□ -0.27
CDCA7-208ENST00000496441 NTRK3Q16288 839 aa13.34□□□□□ -0.27
CDCA7-208ENST00000496441 AXDND1Q5T1B0 1012 aaPredicted RBP13.34□□□□□ -0.27
CDCA7-208ENST00000496441 ATL3Q6DD88 541 aa13.34□□□□□ -0.27
CDCA7-208ENST00000496441 FBXL16Q8N461 479 aa13.34□□□□□ -0.27
CDCA7-208ENST00000496441 LINC00116Q8NCU8 138 aa13.34□□□□□ -0.27
CDCA7-208ENST00000496441 NHSL1Q5SYE7 1610 aa13.34□□□□□ -0.27
CDCA7-208ENST00000496441 COL4A1P02462 1669 aa13.34□□□□□ -0.27
CDCA7-208ENST00000496441 USP27XA6NNY8 438 aa13.34□□□□□ -0.27
CDCA7-208ENST00000496441 RIOK3O14730 519 aaKnown RBP13.34□□□□□ -0.27
CDCA7-208ENST00000496441 FOXN1O15353 648 aa13.34□□□□□ -0.27
CDCA7-208ENST00000496441 YEATS4O95619 227 aa13.34□□□□□ -0.27
CDCA7-208ENST00000496441 RTN1Q16799 776 aa13.34□□□□□ -0.27
CDCA7-208ENST00000496441 SHC4Q6S5L8 630 aa13.34□□□□□ -0.27
CDCA7-208ENST00000496441 ABCC12Q96J65 1359 aa13.34□□□□□ -0.27
CDCA7-208ENST00000496441 ROBO1Q9Y6N7 1651 aa13.34□□□□□ -0.27
CDCA7-208ENST00000496441 MAGEB6P1A0A0J9YX57 407 aa13.33□□□□□ -0.27
CDCA7-208ENST00000496441 PPARAQ07869 468 aa13.33□□□□□ -0.27
CDCA7-208ENST00000496441 SART3Q15020 963 aaKnown RBP13.33□□□□□ -0.27
CDCA7-208ENST00000496441 SLC39A14Q15043 492 aa13.33□□□□□ -0.27
CDCA7-208ENST00000496441 PARP10Q53GL7 1025 aa13.33□□□□□ -0.27
CDCA7-208ENST00000496441 TICAM2Q86XR7 235 aa13.33□□□□□ -0.27
CDCA7-208ENST00000496441 DIS3L2Q8IYB7 885 aaKnown RBP13.33□□□□□ -0.27
CDCA7-208ENST00000496441 CDC5LQ99459 802 aaKnown RBP13.33□□□□□ -0.27
CDCA7-208ENST00000496441 NAT10Q9H0A0 1025 aaKnown RBP13.33□□□□□ -0.27
CDCA7-208ENST00000496441 IFNKQ9P0W0 207 aa13.33□□□□□ -0.27
CDCA7-208ENST00000496441 TBC1D9BQ66K14 1250 aa13.33□□□□□ -0.28
CDCA7-208ENST00000496441 MYRIPQ8NFW9 859 aa13.33□□□□□ -0.28
CDCA7-208ENST00000496441 OXER1Q8TDS5 423 aa13.33□□□□□ -0.28
CDCA7-208ENST00000496441 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.33□□□□□ -0.28
CDCA7-208ENST00000496441 SPTLC3Q9NUV7 552 aa13.33□□□□□ -0.28
CDCA7-208ENST00000496441 ANKRD36CQ5JPF3 1778 aa13.33□□□□□ -0.28
CDCA7-208ENST00000496441 NMT2O60551 498 aa13.33□□□□□ -0.28
CDCA7-208ENST00000496441 TPM3P06753 285 aa13.33□□□□□ -0.28
CDCA7-208ENST00000496441 SKILP12757 684 aa13.33□□□□□ -0.28
CDCA7-208ENST00000496441 ATP1A3P13637 1013 aa13.33□□□□□ -0.28
CDCA7-208ENST00000496441 TRIM22Q8IYM9 498 aa13.33□□□□□ -0.28
CDCA7-208ENST00000496441 KRT23Q9C075 422 aa13.33□□□□□ -0.28
CDCA7-208ENST00000496441 AATFQ9NY61 560 aaKnown RBP eCLIP13.33□□□□□ -0.28
CDCA7-208ENST00000496441 A0A1W2PQ27 194 aa13.32□□□□□ -0.28
CDCA7-208ENST00000496441 A0A1W2PQ64 194 aa13.32□□□□□ -0.28
CDCA7-208ENST00000496441 A0A1W2PQD8 194 aa13.32□□□□□ -0.28
CDCA7-208ENST00000496441 FAM205CA6NFA0 338 aa13.32□□□□□ -0.28
CDCA7-208ENST00000496441 LONRF3Q496Y0 759 aa13.32□□□□□ -0.28
CDCA7-208ENST00000496441 CAVIN4Q5BKX8 364 aa13.32□□□□□ -0.28
CDCA7-208ENST00000496441 LRRC8AQ8IWT6 810 aa13.32□□□□□ -0.28
CDCA7-208ENST00000496441 GRAMD1CQ8IYS0 662 aa13.32□□□□□ -0.28
CDCA7-208ENST00000496441 NGLY1Q96IV0 654 aa13.32□□□□□ -0.28
CDCA7-208ENST00000496441 XPO4Q9C0E2 1151 aaKnown RBP13.32□□□□□ -0.28
CDCA7-208ENST00000496441 VPS54Q9P1Q0 977 aa13.32□□□□□ -0.28
CDCA7-208ENST00000496441 ZNF652Q9Y2D9 606 aa13.32□□□□□ -0.28
CDCA7-208ENST00000496441 TNKSO95271 1327 aa13.32□□□□□ -0.28
CDCA7-208ENST00000496441 DYNC1I1O14576 645 aa13.32□□□□□ -0.28
CDCA7-208ENST00000496441 TNNT1P13805 278 aa13.32□□□□□ -0.28
CDCA7-208ENST00000496441 TMC6Q7Z403 805 aa13.32□□□□□ -0.28
CDCA7-208ENST00000496441 CNNM2Q9H8M5 875 aa13.32□□□□□ -0.28
CDCA7-208ENST00000496441 CABP5Q9NP86 173 aa13.32□□□□□ -0.28
CDCA7-208ENST00000496441 SAFBQ15424 915 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDCA7-208ENST00000496441 ZNF827Q17R98 1081 aa13.31□□□□□ -0.28
CDCA7-208ENST00000496441 FAM47AQ5JRC9 791 aa13.31□□□□□ -0.28
CDCA7-208ENST00000496441 ZNF654Q8IZM8 581 aa13.31□□□□□ -0.28
CDCA7-208ENST00000496441 MINPP1Q9UNW1 487 aa13.31□□□□□ -0.28
CDCA7-208ENST00000496441 CMA1P23946 247 aa13.31□□□□□ -0.28
CDCA7-208ENST00000496441 GOLGA8FQ08AF8 430 aa13.31□□□□□ -0.28
CDCA7-208ENST00000496441 GOLGA8DPQ0D2H9 430 aa13.31□□□□□ -0.28
CDCA7-208ENST00000496441 CNNM3Q8NE01 707 aa13.31□□□□□ -0.28
CDCA7-208ENST00000496441 PCDHB6Q9Y5E3 794 aa13.31□□□□□ -0.28
CDCA7-208ENST00000496441 BAZ2AQ9UIF9 1905 aaKnown RBP13.31□□□□□ -0.28
CDCA7-208ENST00000496441 COL14A1Q05707 1796 aaKnown RBP13.3□□□□□ -0.28
CDCA7-208ENST00000496441 GNPATO15228 680 aa13.3□□□□□ -0.28
CDCA7-208ENST00000496441 TERF1P54274 439 aa13.3□□□□□ -0.28
CDCA7-208ENST00000496441 NAA30Q147X3 362 aaPredicted RBP13.3□□□□□ -0.28
CDCA7-208ENST00000496441 SGMS1Q86VZ5 419 aa13.3□□□□□ -0.28
CDCA7-208ENST00000496441 NBPF5PQ86XG9 351 aaPredicted RBP13.3□□□□□ -0.28
CDCA7-208ENST00000496441 NOSTRINQ8IVI9 506 aa13.3□□□□□ -0.28
CDCA7-208ENST00000496441 FANCBQ8NB91 859 aa13.3□□□□□ -0.28
CDCA7-208ENST00000496441 GNL3LQ9NVN8 582 aaKnown RBP13.3□□□□□ -0.28
CDCA7-208ENST00000496441 MYH2Q9UKX2 1941 aa13.3□□□□□ -0.28
CDCA7-208ENST00000496441 ATRNO75882 1429 aa13.3□□□□□ -0.28
CDCA7-208ENST00000496441 USP17L12C9JPN9 530 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms