RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 EVI5LQ96CN4 794 aa23.47■■□□□ 1.35
HDAC4-212ENST00000495497 PPP4R2Q9NY27 417 aa23.47■■□□□ 1.35
HDAC4-212ENST00000495497 MBD4O95243 580 aa23.46■■□□□ 1.35
HDAC4-212ENST00000495497 ERICH6BQ5W0A0 696 aa23.46■■□□□ 1.35
HDAC4-212ENST00000495497 ZSCAN29Q8IWY8 852 aaPredicted RBP23.46■■□□□ 1.35
HDAC4-212ENST00000495497 OSBPL5Q9H0X9 879 aaPredicted RBP23.46■■□□□ 1.35
HDAC4-212ENST00000495497 ANGEL1Q9UNK9 670 aaKnown RBP23.46■■□□□ 1.35
HDAC4-212ENST00000495497 FLT1P17948 1338 aa23.45■■□□□ 1.34
HDAC4-212ENST00000495497 USP2O75604 605 aaPredicted RBP23.45■■□□□ 1.34
HDAC4-212ENST00000495497 SLURP2P0DP57 97 aa23.45■■□□□ 1.34
HDAC4-212ENST00000495497 DEFB115Q30KQ5 88 aa23.45■■□□□ 1.34
HDAC4-212ENST00000495497 PAXIP1Q6ZW49 1069 aaPredicted RBP23.45■■□□□ 1.34
HDAC4-212ENST00000495497 MIGA2Q7L4E1 593 aa23.45■■□□□ 1.34
HDAC4-212ENST00000495497 OSBP2Q969R2 916 aa23.45■■□□□ 1.34
HDAC4-212ENST00000495497 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.45■■□□□ 1.34
HDAC4-212ENST00000495497 RPAP1Q9BWH6 1393 aaPredicted RBP23.44■■□□□ 1.34
HDAC4-212ENST00000495497 RASSF10A6NK89 507 aa23.44■■□□□ 1.34
HDAC4-212ENST00000495497 USP5P45974 858 aa23.44■■□□□ 1.34
HDAC4-212ENST00000495497 FKBP1BP68106 108 aa23.44■■□□□ 1.34
HDAC4-212ENST00000495497 ARMC9Q7Z3E5 817 aa23.44■■□□□ 1.34
HDAC4-212ENST00000495497 SEC62Q99442 399 aaKnown RBP23.44■■□□□ 1.34
HDAC4-212ENST00000495497 SAP30BPQ9UHR5 308 aaKnown RBP23.44■■□□□ 1.34
HDAC4-212ENST00000495497 M0R2C6 588 aa23.43■■□□□ 1.34
HDAC4-212ENST00000495497 PRKAB2O43741 272 aa23.43■■□□□ 1.34
HDAC4-212ENST00000495497 PPP1R12BO60237 982 aaPredicted RBP23.43■■□□□ 1.34
HDAC4-212ENST00000495497 NPM3O75607 178 aaKnown RBP23.43■■□□□ 1.34
HDAC4-212ENST00000495497 ZFYP08048 801 aaPredicted RBP23.43■■□□□ 1.34
HDAC4-212ENST00000495497 GSPT1P15170 499 aaKnown RBP23.43■■□□□ 1.34
HDAC4-212ENST00000495497 GRM1Q13255 1194 aa23.43■■□□□ 1.34
HDAC4-212ENST00000495497 SLC4A8Q2Y0W8 1093 aa23.43■■□□□ 1.34
HDAC4-212ENST00000495497 DNAJC5GQ8N7S2 189 aa23.43■■□□□ 1.34
HDAC4-212ENST00000495497 SDR42E1Q8WUS8 393 aa23.43■■□□□ 1.34
HDAC4-212ENST00000495497 APPBP2Q92624 585 aa23.43■■□□□ 1.34
HDAC4-212ENST00000495497 AIDAQ96BJ3 306 aa23.43■■□□□ 1.34
HDAC4-212ENST00000495497 CSRNP1Q96S65 589 aa23.43■■□□□ 1.34
HDAC4-212ENST00000495497 TTC22Q5TAA0 569 aa23.42■■□□□ 1.34
HDAC4-212ENST00000495497 CYP4F22Q6NT55 531 aa23.42■■□□□ 1.34
HDAC4-212ENST00000495497 CERS3Q8IU89 383 aa23.42■■□□□ 1.34
HDAC4-212ENST00000495497 CRNKL1Q9BZJ0 848 aaKnown RBP23.42■■□□□ 1.34
HDAC4-212ENST00000495497 PAPPA2Q9BXP8 1791 aa23.42■■□□□ 1.34
HDAC4-212ENST00000495497 MAP3K11Q16584 847 aa23.41■■□□□ 1.34
HDAC4-212ENST00000495497 LRRFIP1Q32MZ4 808 aaKnown RBP23.41■■□□□ 1.34
HDAC4-212ENST00000495497 ZMYM1Q5SVZ6 1142 aa23.41■■□□□ 1.34
HDAC4-212ENST00000495497 PALD1Q9ULE6 856 aa23.41■■□□□ 1.34
HDAC4-212ENST00000495497 IREB2P48200 963 aaKnown RBP23.4■■□□□ 1.34
HDAC4-212ENST00000495497 VEGFBP49765 207 aa23.4■■□□□ 1.34
HDAC4-212ENST00000495497 LDLRAD1Q5T700 205 aa23.4■■□□□ 1.34
HDAC4-212ENST00000495497 RGMBQ6NW40 437 aa23.4■■□□□ 1.34
HDAC4-212ENST00000495497 CLMNQ96JQ2 1002 aa23.4■■□□□ 1.34
HDAC4-212ENST00000495497 ATRNL1Q5VV63 1379 aa23.4■■□□□ 1.34
HDAC4-212ENST00000495497 MYH7P12883 1935 aa23.39■■□□□ 1.34
HDAC4-212ENST00000495497 FAM196BA6NMK8 535 aa23.39■■□□□ 1.33
HDAC4-212ENST00000495497 ZNF157P51786 506 aaPredicted RBP23.39■■□□□ 1.33
HDAC4-212ENST00000495497 KLRG1Q96E93 195 aa23.39■■□□□ 1.33
HDAC4-212ENST00000495497 HOOK2Q96ED9 719 aa23.39■■□□□ 1.33
HDAC4-212ENST00000495497 STRBPQ96SI9 672 aaKnown RBP23.39■■□□□ 1.33
HDAC4-212ENST00000495497 SLC4A4Q9Y6R1 1079 aa23.39■■□□□ 1.33
HDAC4-212ENST00000495497 DCAF15Q66K64 600 aa23.38■■□□□ 1.33
HDAC4-212ENST00000495497 CCDC129Q6ZRS4 1044 aa23.38■■□□□ 1.33
HDAC4-212ENST00000495497 HHIPL1Q96JK4 782 aa23.38■■□□□ 1.33
HDAC4-212ENST00000495497 CAPNS2Q96L46 248 aa23.38■■□□□ 1.33
HDAC4-212ENST00000495497 FAM227BQ96M60 508 aa23.38■■□□□ 1.33
HDAC4-212ENST00000495497 ZNF341Q9BYN7 854 aa23.38■■□□□ 1.33
HDAC4-212ENST00000495497 GPAA1O43292 621 aa23.37■■□□□ 1.33
HDAC4-212ENST00000495497 SDSP20132 328 aa23.37■■□□□ 1.33
HDAC4-212ENST00000495497 NMIQ13287 307 aaPredicted RBP23.37■■□□□ 1.33
HDAC4-212ENST00000495497 WRNIP1Q96S55 665 aa23.37■■□□□ 1.33
HDAC4-212ENST00000495497 DCP1AQ9NPI6 582 aaPredicted RBP23.37■■□□□ 1.33
HDAC4-212ENST00000495497 COL2A1P02458 1487 aaPredicted RBP23.36■■□□□ 1.33
HDAC4-212ENST00000495497 CDK5RAP2Q96SN8 1893 aa23.36■■□□□ 1.33
HDAC4-212ENST00000495497 WDR33Q9C0J8 1336 aaKnown RBP23.36■■□□□ 1.33
HDAC4-212ENST00000495497 A0A0D9SFI3 127 aa23.36■■□□□ 1.33
HDAC4-212ENST00000495497 MAP3K9P80192 1104 aa23.36■■□□□ 1.33
HDAC4-212ENST00000495497 EVX2Q03828 476 aa23.36■■□□□ 1.33
HDAC4-212ENST00000495497 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.36■■□□□ 1.33
HDAC4-212ENST00000495497 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.36■■□□□ 1.33
HDAC4-212ENST00000495497 ZKSCAN4Q969J2 545 aaPredicted RBP23.36■■□□□ 1.33
HDAC4-212ENST00000495497 DHX36Q9H2U1 1008 aaKnown RBP23.36■■□□□ 1.33
HDAC4-212ENST00000495497 CEP350Q5VT06 3117 aa23.36■■□□□ 1.33
HDAC4-212ENST00000495497 AK9Q5TCS8 1911 aa23.35■■□□□ 1.33
HDAC4-212ENST00000495497 AOC2O75106 756 aa23.35■■□□□ 1.33
HDAC4-212ENST00000495497 INPP5BP32019 993 aa23.35■■□□□ 1.33
HDAC4-212ENST00000495497 RASAL3Q86YV0 1011 aa23.35■■□□□ 1.33
HDAC4-212ENST00000495497 ANKRD13AQ8IZ07 590 aa23.35■■□□□ 1.33
HDAC4-212ENST00000495497 ELP3Q9H9T3 547 aa23.35■■□□□ 1.33
HDAC4-212ENST00000495497 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.35■■□□□ 1.33
HDAC4-212ENST00000495497 MCM9Q9NXL9 1143 aa23.35■■□□□ 1.33
HDAC4-212ENST00000495497 FAM155AB1AL88 458 aaPredicted RBP23.34■■□□□ 1.33
HDAC4-212ENST00000495497 POLR3DP05423 398 aaPredicted RBP23.34■■□□□ 1.33
HDAC4-212ENST00000495497 CYP2D6P10635 497 aa23.34■■□□□ 1.33
HDAC4-212ENST00000495497 MAP3K10Q02779 954 aa23.34■■□□□ 1.33
HDAC4-212ENST00000495497 MKRN3Q13064 507 aaKnown RBP23.34■■□□□ 1.33
HDAC4-212ENST00000495497 VGLL4Q14135 290 aa23.34■■□□□ 1.33
HDAC4-212ENST00000495497 SLC10A4Q96EP9 437 aa23.34■■□□□ 1.33
HDAC4-212ENST00000495497 ZIC5Q96T25 663 aa23.34■■□□□ 1.33
HDAC4-212ENST00000495497 HELLSQ9NRZ9 838 aa23.34■■□□□ 1.33
HDAC4-212ENST00000495497 PI4KBQ9UBF8 816 aa23.34■■□□□ 1.33
HDAC4-212ENST00000495497 ZNF112Q9UJU3 913 aa23.34■■□□□ 1.33
HDAC4-212ENST00000495497 FOCADQ5VW36 1801 aa23.33■■□□□ 1.33
HDAC4-212ENST00000495497 GSG1L2A8MUP6 293 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms