RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 E9PSI1 815 aa17.07■□□□□ 0.32
SAMM50-204ENST00000493161 FCGRTP55899 365 aa17.07■□□□□ 0.32
SAMM50-204ENST00000493161 GADL1Q6ZQY3 521 aa17.07■□□□□ 0.32
SAMM50-204ENST00000493161 PRRT2Q7Z6L0 340 aaPredicted RBP17.07■□□□□ 0.32
SAMM50-204ENST00000493161 CCDC84Q86UT8 332 aaPredicted RBP17.07■□□□□ 0.32
SAMM50-204ENST00000493161 IDI2Q9BXS1 227 aa17.07■□□□□ 0.32
SAMM50-204ENST00000493161 DENND2AQ9ULE3 1009 aa17.07■□□□□ 0.32
SAMM50-204ENST00000493161 AFG3L2Q9Y4W6 797 aa17.07■□□□□ 0.32
SAMM50-204ENST00000493161 DOCK2Q92608 1830 aa17.07■□□□□ 0.32
SAMM50-204ENST00000493161 TRIOBPQ9H2D6 2365 aa17.07■□□□□ 0.32
SAMM50-204ENST00000493161 MGAMO43451 1857 aa17.06■□□□□ 0.32
SAMM50-204ENST00000493161 GAKO14976 1311 aa17.06■□□□□ 0.32
SAMM50-204ENST00000493161 ENTPD3O75355 529 aa17.06■□□□□ 0.32
SAMM50-204ENST00000493161 UBTFL1P0CB47 393 aaPredicted RBP17.06■□□□□ 0.32
SAMM50-204ENST00000493161 CCDC102BQ68D86 513 aa17.06■□□□□ 0.32
SAMM50-204ENST00000493161 NKX2-3Q8TAU0 364 aa17.06■□□□□ 0.32
SAMM50-204ENST00000493161 U2AF1L4Q8WU68 220 aaKnown RBP17.06■□□□□ 0.32
SAMM50-204ENST00000493161 SMC4Q9NTJ3 1288 aa17.06■□□□□ 0.32
SAMM50-204ENST00000493161 LRRFIP2Q9Y608 721 aaKnown RBP17.06■□□□□ 0.32
SAMM50-204ENST00000493161 RANBP2P49792 3224 aaKnown RBP17.06■□□□□ 0.32
SAMM50-204ENST00000493161 SEMA3EO15041 775 aa17.05■□□□□ 0.32
SAMM50-204ENST00000493161 ELNP15502 786 aa17.05■□□□□ 0.32
SAMM50-204ENST00000493161 TIMM10P62072 90 aa17.05■□□□□ 0.32
SAMM50-204ENST00000493161 MAP3K10Q02779 954 aa17.05■□□□□ 0.32
SAMM50-204ENST00000493161 RASGRF1Q13972 1273 aa17.05■□□□□ 0.32
SAMM50-204ENST00000493161 ZSCAN29Q8IWY8 852 aaPredicted RBP17.05■□□□□ 0.32
SAMM50-204ENST00000493161 PICK1Q9NRD5 415 aa17.05■□□□□ 0.32
SAMM50-204ENST00000493161 FBXO3Q9UK99 471 aa17.05■□□□□ 0.32
SAMM50-204ENST00000493161 MYH2Q9UKX2 1941 aa17.05■□□□□ 0.32
SAMM50-204ENST00000493161 TRIM75PA6NK02 468 aa17.04■□□□□ 0.32
SAMM50-204ENST00000493161 ADCY3O60266 1144 aa17.04■□□□□ 0.32
SAMM50-204ENST00000493161 IL15P40933 162 aaPredicted RBP17.04■□□□□ 0.32
SAMM50-204ENST00000493161 FLT3LGP49771 235 aa17.04■□□□□ 0.32
SAMM50-204ENST00000493161 UBXN2AP68543 259 aa17.04■□□□□ 0.32
SAMM50-204ENST00000493161 PICALMQ13492 652 aa17.04■□□□□ 0.32
SAMM50-204ENST00000493161 ALDH1L2Q3SY69 923 aa17.04■□□□□ 0.32
SAMM50-204ENST00000493161 FASTKD5Q7L8L6 764 aaKnown RBP17.04■□□□□ 0.32
SAMM50-204ENST00000493161 SLAIN1Q8ND83 568 aa17.04■□□□□ 0.32
SAMM50-204ENST00000493161 PRO3102Q9H379 93 aa17.04■□□□□ 0.32
SAMM50-204ENST00000493161 ABCF2Q9UG63 623 aa17.04■□□□□ 0.32
SAMM50-204ENST00000493161 NOB1Q9ULX3 412 aaKnown RBP17.04■□□□□ 0.32
SAMM50-204ENST00000493161 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.04■□□□□ 0.32
SAMM50-204ENST00000493161 PHIPQ8WWQ0 1821 aa17.03■□□□□ 0.32
SAMM50-204ENST00000493161 FAM196BA6NMK8 535 aa17.03■□□□□ 0.32
SAMM50-204ENST00000493161 FARP2O94887 1054 aaPredicted RBP17.03■□□□□ 0.32
SAMM50-204ENST00000493161 BTDP43251 543 aa17.03■□□□□ 0.32
SAMM50-204ENST00000493161 DZIP1Q86YF9 867 aaKnown RBP17.03■□□□□ 0.32
SAMM50-204ENST00000493161 ZNF384Q8TF68 577 aa17.03■□□□□ 0.32
SAMM50-204ENST00000493161 SGPL1O95470 568 aa17.02■□□□□ 0.32
SAMM50-204ENST00000493161 INHAP05111 366 aa17.02■□□□□ 0.32
SAMM50-204ENST00000493161 TREML2Q5T2D2 321 aa17.02■□□□□ 0.32
SAMM50-204ENST00000493161 MEIS3Q99687 375 aa17.02■□□□□ 0.32
SAMM50-204ENST00000493161 HTATIP2Q9BUP3 242 aa17.02■□□□□ 0.32
SAMM50-204ENST00000493161 COPRSQ9NQ92 184 aa17.02■□□□□ 0.32
SAMM50-204ENST00000493161 PTPRFP10586 1907 aa17.02■□□□□ 0.31
SAMM50-204ENST00000493161 DOCK1Q14185 1865 aa17.01■□□□□ 0.31
SAMM50-204ENST00000493161 ZBTB7BO15156 539 aaPredicted RBP17.01■□□□□ 0.31
SAMM50-204ENST00000493161 CTNND1O60716 968 aaKnown RBP17.01■□□□□ 0.31
SAMM50-204ENST00000493161 RHBDL3P58872 404 aa17.01■□□□□ 0.31
SAMM50-204ENST00000493161 MECOMQ03112 1051 aa17.01■□□□□ 0.31
SAMM50-204ENST00000493161 ZGPATQ8N5A5 531 aaKnown RBP17.01■□□□□ 0.31
SAMM50-204ENST00000493161 ANKRD13CQ8N6S4 541 aa17.01■□□□□ 0.31
SAMM50-204ENST00000493161 SMCR8Q8TEV9 937 aaPredicted RBP17.01■□□□□ 0.31
SAMM50-204ENST00000493161 FAM163AQ96GL9 167 aaPredicted RBP17.01■□□□□ 0.31
SAMM50-204ENST00000493161 SLC45A1Q9Y2W3 748 aa17.01■□□□□ 0.31
SAMM50-204ENST00000493161 MROH7-TTC4A0A0A0MT08 1334 aa17■□□□□ 0.31
SAMM50-204ENST00000493161 TNPO2O14787 897 aaKnown RBP17■□□□□ 0.31
SAMM50-204ENST00000493161 ZBTB22O15209 634 aa17■□□□□ 0.31
SAMM50-204ENST00000493161 TFCP2Q12800 502 aa17■□□□□ 0.31
SAMM50-204ENST00000493161 PI16Q6UXB8 463 aa17■□□□□ 0.31
SAMM50-204ENST00000493161 TRMT2AQ8IZ69 625 aaKnown RBP17■□□□□ 0.31
SAMM50-204ENST00000493161 XAGE2Q96GT9 111 aa17■□□□□ 0.31
SAMM50-204ENST00000493161 DEFB118Q96PH6 123 aa17■□□□□ 0.31
SAMM50-204ENST00000493161 TAOK2Q9UL54 1235 aa17■□□□□ 0.31
SAMM50-204ENST00000493161 GPR75-ASB3A0A0A6YYF3 556 aa16.99■□□□□ 0.31
SAMM50-204ENST00000493161 A0A1B0GUL7 405 aa16.99■□□□□ 0.31
SAMM50-204ENST00000493161 TFRCP02786 760 aaKnown RBP16.99■□□□□ 0.31
SAMM50-204ENST00000493161 IRF5Q13568 498 aa16.99■□□□□ 0.31
SAMM50-204ENST00000493161 RRP1BQ14684 758 aaKnown RBP16.99■□□□□ 0.31
SAMM50-204ENST00000493161 PXYLP1Q8TE99 480 aa16.99■□□□□ 0.31
SAMM50-204ENST00000493161 AGTPBP1Q9UPW5 1226 aa16.99■□□□□ 0.31
SAMM50-204ENST00000493161 PDS5AQ29RF7 1337 aaKnown RBP16.98■□□□□ 0.31
SAMM50-204ENST00000493161 TBC1D9Q6ZT07 1266 aa16.98■□□□□ 0.31
SAMM50-204ENST00000493161 PAK6Q9NQU5 681 aaPredicted RBP16.98■□□□□ 0.31
SAMM50-204ENST00000493161 NR2E3Q9Y5X4 410 aa16.98■□□□□ 0.31
SAMM50-204ENST00000493161 SOX1O00570 391 aaPredicted RBP16.97■□□□□ 0.31
SAMM50-204ENST00000493161 TBC1D12O60347 775 aa16.97■□□□□ 0.31
SAMM50-204ENST00000493161 SPP2Q13103 211 aa16.97■□□□□ 0.31
SAMM50-204ENST00000493161 SPTY2D1Q68D10 685 aaPredicted RBP16.97■□□□□ 0.31
SAMM50-204ENST00000493161 ERICH6Q7L0X2 663 aa16.97■□□□□ 0.31
SAMM50-204ENST00000493161 SLF2Q8IX21 1173 aa16.97■□□□□ 0.31
SAMM50-204ENST00000493161 DIS3LQ8TF46 1054 aaKnown RBP16.97■□□□□ 0.31
SAMM50-204ENST00000493161 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.97■□□□□ 0.31
SAMM50-204ENST00000493161 HMG20BQ9P0W2 317 aa16.97■□□□□ 0.31
SAMM50-204ENST00000493161 SRGAP3O43295 1099 aa16.96■□□□□ 0.31
SAMM50-204ENST00000493161 EVI5O60447 810 aa16.96■□□□□ 0.31
SAMM50-204ENST00000493161 COA7Q96BR5 231 aa16.96■□□□□ 0.31
SAMM50-204ENST00000493161 NSUN4Q96CB9 384 aaKnown RBP16.96■□□□□ 0.31
SAMM50-204ENST00000493161 PAWRQ96IZ0 340 aaKnown RBP16.96■□□□□ 0.31
SAMM50-204ENST00000493161 NEUROD6Q96NK8 337 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms