RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 USP26Q9BXU7 913 aa11.22□□□□□ -0.61
CSTF1-206ENST00000493039 DCP1AQ9NPI6 582 aaPredicted RBP11.22□□□□□ -0.61
CSTF1-206ENST00000493039 ZNF70Q9UC06 446 aaPredicted RBP11.22□□□□□ -0.61
CSTF1-206ENST00000493039 FAM198AQ9UFP1 575 aa11.22□□□□□ -0.61
CSTF1-206ENST00000493039 SCAF8Q9UPN6 1271 aaKnown RBP11.22□□□□□ -0.61
CSTF1-206ENST00000493039 SLC4A4Q9Y6R1 1079 aa11.22□□□□□ -0.61
CSTF1-206ENST00000493039 CLRN2A0PK11 232 aa11.21□□□□□ -0.61
CSTF1-206ENST00000493039 FGAP02671 866 aa11.21□□□□□ -0.61
CSTF1-206ENST00000493039 TAF1DQ9H5J8 278 aaPredicted RBP11.21□□□□□ -0.61
CSTF1-206ENST00000493039 ANO2Q9NQ90 1003 aa11.21□□□□□ -0.61
CSTF1-206ENST00000493039 ADARB2Q9NS39 739 aaKnown RBP11.21□□□□□ -0.61
CSTF1-206ENST00000493039 MFAP1P55081 439 aaKnown RBP11.21□□□□□ -0.62
CSTF1-206ENST00000493039 TEX11Q8IYF3 940 aa11.21□□□□□ -0.62
CSTF1-206ENST00000493039 IFNL3Q8IZI9 196 aa11.21□□□□□ -0.62
CSTF1-206ENST00000493039 DSCC1Q9BVC3 393 aa11.21□□□□□ -0.62
CSTF1-206ENST00000493039 IDI2Q9BXS1 227 aa11.21□□□□□ -0.62
CSTF1-206ENST00000493039 HACL1Q9UJ83 578 aa11.21□□□□□ -0.62
CSTF1-206ENST00000493039 TAF6LQ9Y6J9 622 aa11.21□□□□□ -0.62
CSTF1-206ENST00000493039 POTEIP0CG38 1075 aa11.2□□□□□ -0.62
CSTF1-206ENST00000493039 POTEJP0CG39 1038 aa11.2□□□□□ -0.62
CSTF1-206ENST00000493039 PLCG2P16885 1265 aa11.2□□□□□ -0.62
CSTF1-206ENST00000493039 EPHX2P34913 555 aa11.2□□□□□ -0.62
CSTF1-206ENST00000493039 ALX1Q15699 326 aa11.2□□□□□ -0.62
CSTF1-206ENST00000493039 SH3BP5LQ7L8J4 393 aa11.2□□□□□ -0.62
CSTF1-206ENST00000493039 MAPKAPK5Q8IW41 473 aa11.2□□□□□ -0.62
CSTF1-206ENST00000493039 CRNKL1Q9BZJ0 848 aaKnown RBP11.2□□□□□ -0.62
CSTF1-206ENST00000493039 RRAGCQ9HB90 399 aa11.2□□□□□ -0.62
CSTF1-206ENST00000493039 NMRK2Q9NPI5 230 aa11.2□□□□□ -0.62
CSTF1-206ENST00000493039 PGAP2Q9UHJ9 254 aa11.2□□□□□ -0.62
CSTF1-206ENST00000493039 FLT1P17948 1338 aa11.2□□□□□ -0.62
CSTF1-206ENST00000493039 GNAT2P19087 354 aa11.2□□□□□ -0.62
CSTF1-206ENST00000493039 LMOD1P29536 600 aaPredicted RBP11.2□□□□□ -0.62
CSTF1-206ENST00000493039 NECTIN1Q15223 517 aa11.2□□□□□ -0.62
CSTF1-206ENST00000493039 CDAN1Q8IWY9 1227 aa11.2□□□□□ -0.62
CSTF1-206ENST00000493039 TACC3Q9Y6A5 838 aa11.2□□□□□ -0.62
CSTF1-206ENST00000493039 CNTNAP1P78357 1384 aa11.2□□□□□ -0.62
CSTF1-206ENST00000493039 RPAP1Q9BWH6 1393 aaPredicted RBP11.2□□□□□ -0.62
CSTF1-206ENST00000493039 WDR90Q96KV7 1748 aa11.19□□□□□ -0.62
CSTF1-206ENST00000493039 CYP2D7A0A087X1C5 515 aa11.19□□□□□ -0.62
CSTF1-206ENST00000493039 SLURP2P0DP57 97 aa11.19□□□□□ -0.62
CSTF1-206ENST00000493039 CTR9Q6PD62 1173 aa11.19□□□□□ -0.62
CSTF1-206ENST00000493039 CERS3Q8IU89 383 aa11.19□□□□□ -0.62
CSTF1-206ENST00000493039 NOL10Q9BSC4 688 aaKnown RBP11.19□□□□□ -0.62
CSTF1-206ENST00000493039 NBPF3Q9H094 633 aa11.19□□□□□ -0.62
CSTF1-206ENST00000493039 ATP8A2Q9NTI2 1148 aa11.19□□□□□ -0.62
CSTF1-206ENST00000493039 RBM8AQ9Y5S9 174 aaKnown RBP11.19□□□□□ -0.62
CSTF1-206ENST00000493039 TCP10L2B9ZVM9 353 aa11.19□□□□□ -0.62
CSTF1-206ENST00000493039 USP17L12C9JPN9 530 aa11.19□□□□□ -0.62
CSTF1-206ENST00000493039 USP17L21D6R901 530 aa11.19□□□□□ -0.62
CSTF1-206ENST00000493039 NPM3O75607 178 aaKnown RBP11.19□□□□□ -0.62
CSTF1-206ENST00000493039 REC8O95072 547 aa11.19□□□□□ -0.62
CSTF1-206ENST00000493039 APPP05067 770 aa11.19□□□□□ -0.62
CSTF1-206ENST00000493039 CYP2D6P10635 497 aa11.19□□□□□ -0.62
CSTF1-206ENST00000493039 TCP10Q12799 353 aa11.19□□□□□ -0.62
CSTF1-206ENST00000493039 PICALMQ13492 652 aa11.19□□□□□ -0.62
CSTF1-206ENST00000493039 COL9A3Q14050 684 aaPredicted RBP11.19□□□□□ -0.62
CSTF1-206ENST00000493039 ANGEL2Q5VTE6 544 aaKnown RBP11.19□□□□□ -0.62
CSTF1-206ENST00000493039 FKBP1CQ5VVH2 108 aa11.19□□□□□ -0.62
CSTF1-206ENST00000493039 GIMAP6Q6P9H5 292 aa11.19□□□□□ -0.62
CSTF1-206ENST00000493039 DLK2Q6UY11 383 aa11.19□□□□□ -0.62
CSTF1-206ENST00000493039 ZNF526Q8TF50 670 aaPredicted RBP11.19□□□□□ -0.62
CSTF1-206ENST00000493039 BBXQ8WY36 941 aaPredicted RBP11.19□□□□□ -0.62
CSTF1-206ENST00000493039 PALD1Q9ULE6 856 aa11.19□□□□□ -0.62
CSTF1-206ENST00000493039 DDTLA6NHG4 134 aaPredicted RBP11.18□□□□□ -0.62
CSTF1-206ENST00000493039 PLCD1P51178 756 aa11.18□□□□□ -0.62
CSTF1-206ENST00000493039 KIAA1211Q6ZU35 1233 aa11.18□□□□□ -0.62
CSTF1-206ENST00000493039 USP50Q70EL3 339 aaPredicted RBP11.18□□□□□ -0.62
CSTF1-206ENST00000493039 RASEFQ8IZ41 740 aa11.18□□□□□ -0.62
CSTF1-206ENST00000493039 NKX2-3Q8TAU0 364 aa11.18□□□□□ -0.62
CSTF1-206ENST00000493039 ARID3AQ99856 593 aa11.18□□□□□ -0.62
CSTF1-206ENST00000493039 OSBPL5Q9H0X9 879 aaPredicted RBP11.18□□□□□ -0.62
CSTF1-206ENST00000493039 SAP30BPQ9UHR5 308 aaKnown RBP11.18□□□□□ -0.62
CSTF1-206ENST00000493039 IQCA1LA6NCM1 817 aa11.17□□□□□ -0.62
CSTF1-206ENST00000493039 CYP21A2P08686 494 aa11.17□□□□□ -0.62
CSTF1-206ENST00000493039 VEGFAP15692 232 aaPredicted RBP11.17□□□□□ -0.62
CSTF1-206ENST00000493039 USP5P45974 858 aa11.17□□□□□ -0.62
CSTF1-206ENST00000493039 SLC4A8Q2Y0W8 1093 aa11.17□□□□□ -0.62
CSTF1-206ENST00000493039 KCNB2Q92953 911 aa11.17□□□□□ -0.62
CSTF1-206ENST00000493039 TEPSINQ96N21 525 aa11.17□□□□□ -0.62
CSTF1-206ENST00000493039 TMEM39BQ9GZU3 492 aa11.17□□□□□ -0.62
CSTF1-206ENST00000493039 VEZTQ9HBM0 779 aa11.17□□□□□ -0.62
CSTF1-206ENST00000493039 INCENPQ9NQS7 918 aa11.17□□□□□ -0.62
CSTF1-206ENST00000493039 MCM9Q9NXL9 1143 aa11.17□□□□□ -0.62
CSTF1-206ENST00000493039 GGA3Q9NZ52 723 aa11.17□□□□□ -0.62
CSTF1-206ENST00000493039 EPB41L2O43491 1005 aaKnown RBP11.17□□□□□ -0.62
CSTF1-206ENST00000493039 MYO1BO43795 1136 aa11.17□□□□□ -0.62
CSTF1-206ENST00000493039 HSPA4P34932 840 aa11.17□□□□□ -0.62
CSTF1-206ENST00000493039 RASA3Q14644 834 aa11.17□□□□□ -0.62
CSTF1-206ENST00000493039 SBK1Q52WX2 424 aa11.17□□□□□ -0.62
CSTF1-206ENST00000493039 NAPBQ9H115 298 aa11.17□□□□□ -0.62
CSTF1-206ENST00000493039 ZMYM6O95789 1325 aa11.17□□□□□ -0.62
CSTF1-206ENST00000493039 CDK5RAP2Q96SN8 1893 aa11.16□□□□□ -0.62
CSTF1-206ENST00000493039 SLC27A2O14975 620 aa11.16□□□□□ -0.62
CSTF1-206ENST00000493039 ENTPD3O75355 529 aa11.16□□□□□ -0.62
CSTF1-206ENST00000493039 HAND2P61296 217 aa11.16□□□□□ -0.62
CSTF1-206ENST00000493039 C12orf60Q5U649 245 aa11.16□□□□□ -0.62
CSTF1-206ENST00000493039 PRAMEF18Q5VWM3 479 aa11.16□□□□□ -0.62
CSTF1-206ENST00000493039 CREB3L3Q68CJ9 461 aa11.16□□□□□ -0.62
CSTF1-206ENST00000493039 FAM83AQ86UY5 434 aa11.16□□□□□ -0.62
CSTF1-206ENST00000493039 FAM151AQ8WW52 585 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms