RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 MBD3O95983 291 aa10.73□□□□□ -0.69
SMARCC1-208ENST00000492896 CSPP1Q1MSJ5 1256 aa10.73□□□□□ -0.69
SMARCC1-208ENST00000492896 IFFO2Q5TF58 517 aa10.73□□□□□ -0.69
SMARCC1-208ENST00000492896 NFXL1Q6ZNB6 911 aa10.73□□□□□ -0.69
SMARCC1-208ENST00000492896 SLF2Q8IX21 1173 aa10.73□□□□□ -0.69
SMARCC1-208ENST00000492896 TMEM87AQ8NBN3 555 aa10.73□□□□□ -0.69
SMARCC1-208ENST00000492896 DDX11Q96FC9 970 aa10.73□□□□□ -0.69
SMARCC1-208ENST00000492896 CHAMP1Q96JM3 812 aa10.73□□□□□ -0.69
SMARCC1-208ENST00000492896 EYA3Q99504 573 aa10.73□□□□□ -0.69
SMARCC1-208ENST00000492896 LY9Q9HBG7 655 aa10.73□□□□□ -0.69
SMARCC1-208ENST00000492896 NCOA5Q9HCD5 579 aaKnown RBP10.73□□□□□ -0.69
SMARCC1-208ENST00000492896 TACC3Q9Y6A5 838 aa10.73□□□□□ -0.69
SMARCC1-208ENST00000492896 NID2Q14112 1375 aa10.73□□□□□ -0.69
SMARCC1-208ENST00000492896 ERICH2A1L162 156 aa10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 CCDC69A6NI79 296 aa10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 CPLX1O14810 134 aa10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 RIMBP2O15034 1052 aa10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 ZBTB43O43298 467 aa10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 SLC3A2P08195 630 aaKnown RBP10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 LIFRP42702 1097 aa10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 METAP2P50579 478 aaKnown RBP eCLIP10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 PPP4CP60510 307 aa10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 GRIK5Q16478 980 aa10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 FOXD4L6Q3SYB3 417 aaPredicted RBP10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 SBK1Q52WX2 424 aa10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 MFSD14BQ5SR56 506 aa10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 CTR9Q6PD62 1173 aa10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 APOA5Q6Q788 366 aa10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 FOXD4L3Q6VB84 417 aaPredicted RBP10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 DEFB132Q7Z7B7 95 aa10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 SGMS1Q86VZ5 419 aa10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 NKX2-3Q8TAU0 364 aa10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 ESR2Q92731 530 aa10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 CNKSR1Q969H4 720 aa10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 ZC3H12CQ9C0D7 883 aaKnown RBP10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 GZF1Q9H116 711 aaPredicted RBP10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 DCP1AQ9NPI6 582 aaPredicted RBP10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 INCENPQ9NQS7 918 aa10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 ZSWIM5Q9P217 1185 aa10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 HPS5Q9UPZ3 1129 aa10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 SCN9AQ15858 1988 aa10.72□□□□□ -0.69
SMARCC1-208ENST00000492896 GOLGA8AA7E2F4 631 aa10.71□□□□□ -0.69
SMARCC1-208ENST00000492896 USP17L12C9JPN9 530 aa10.71□□□□□ -0.69
SMARCC1-208ENST00000492896 USP17L21D6R901 530 aa10.71□□□□□ -0.69
SMARCC1-208ENST00000492896 CDKL5O76039 1030 aa10.71□□□□□ -0.69
SMARCC1-208ENST00000492896 PLCG2P16885 1265 aa10.71□□□□□ -0.69
SMARCC1-208ENST00000492896 NCLP19338 710 aaKnown RBP10.71□□□□□ -0.69
SMARCC1-208ENST00000492896 USP5P45974 858 aa10.71□□□□□ -0.69
SMARCC1-208ENST00000492896 WTAPQ15007 396 aa10.71□□□□□ -0.69
SMARCC1-208ENST00000492896 DIXDC1Q155Q3 683 aa10.71□□□□□ -0.69
SMARCC1-208ENST00000492896 CPLX2Q6PUV4 134 aaKnown RBP10.71□□□□□ -0.69
SMARCC1-208ENST00000492896 SYNE3Q6ZMZ3 975 aa10.71□□□□□ -0.69
SMARCC1-208ENST00000492896 RAB11FIP4Q86YS3 637 aa10.71□□□□□ -0.69
SMARCC1-208ENST00000492896 AMOTL1Q8IY63 956 aa10.71□□□□□ -0.69
SMARCC1-208ENST00000492896 STK11IPQ8N1F8 1099 aa10.71□□□□□ -0.69
SMARCC1-208ENST00000492896 IGDCC4Q8TDY8 1250 aa10.71□□□□□ -0.69
SMARCC1-208ENST00000492896 UBAC1Q9BSL1 405 aa10.71□□□□□ -0.69
SMARCC1-208ENST00000492896 RTFDC1Q9BY42 306 aaPredicted RBP10.71□□□□□ -0.69
SMARCC1-208ENST00000492896 CNPY2Q9Y2B0 182 aa10.71□□□□□ -0.69
SMARCC1-208ENST00000492896 SUGT1Q9Y2Z0 365 aa10.71□□□□□ -0.69
SMARCC1-208ENST00000492896 ROBO3Q96MS0 1386 aa10.7□□□□□ -0.7
SMARCC1-208ENST00000492896 GAKO14976 1311 aa10.7□□□□□ -0.7
SMARCC1-208ENST00000492896 CYP2D7A0A087X1C5 515 aa10.7□□□□□ -0.7
SMARCC1-208ENST00000492896 G3V3G9 751 aa10.7□□□□□ -0.7
SMARCC1-208ENST00000492896 FIBPO43427 364 aa10.7□□□□□ -0.7
SMARCC1-208ENST00000492896 ORC4O43929 436 aa10.7□□□□□ -0.7
SMARCC1-208ENST00000492896 FGRP09769 529 aa10.7□□□□□ -0.7
SMARCC1-208ENST00000492896 BTDP43251 543 aa10.7□□□□□ -0.7
SMARCC1-208ENST00000492896 NT5C2P49902 561 aa10.7□□□□□ -0.7
SMARCC1-208ENST00000492896 GTF2IP78347 998 aa10.7□□□□□ -0.7
SMARCC1-208ENST00000492896 KRT85P78386 507 aa10.7□□□□□ -0.7
SMARCC1-208ENST00000492896 RESTQ13127 1097 aa10.7□□□□□ -0.7
SMARCC1-208ENST00000492896 DCAF8Q5TAQ9 597 aa10.7□□□□□ -0.7
SMARCC1-208ENST00000492896 OLFM4Q6UX06 510 aa10.7□□□□□ -0.7
SMARCC1-208ENST00000492896 MICU3Q86XE3 530 aa10.7□□□□□ -0.7
SMARCC1-208ENST00000492896 SH3RF3Q8TEJ3 882 aaPredicted RBP10.7□□□□□ -0.7
SMARCC1-208ENST00000492896 FBXW7Q969H0 707 aa10.7□□□□□ -0.7
SMARCC1-208ENST00000492896 ZSCAN16Q9H4T2 348 aaPredicted RBP10.7□□□□□ -0.7
SMARCC1-208ENST00000492896 ORC3Q9UBD5 711 aaPredicted RBP10.7□□□□□ -0.7
SMARCC1-208ENST00000492896 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.7□□□□□ -0.7
SMARCC1-208ENST00000492896 SLC12A7Q9Y666 1083 aa10.7□□□□□ -0.7
SMARCC1-208ENST00000492896 TNKSO95271 1327 aa10.69□□□□□ -0.7
SMARCC1-208ENST00000492896 GPR75-ASB3A0A0A6YYF3 556 aa10.69□□□□□ -0.7
SMARCC1-208ENST00000492896 CYP2D6P10635 497 aa10.69□□□□□ -0.7
SMARCC1-208ENST00000492896 CHRNA5P30532 468 aa10.69□□□□□ -0.7
SMARCC1-208ENST00000492896 FOSBP53539 338 aa10.69□□□□□ -0.7
SMARCC1-208ENST00000492896 RCAN1P53805 252 aa10.69□□□□□ -0.7
SMARCC1-208ENST00000492896 DNM1Q05193 864 aaKnown RBP10.69□□□□□ -0.7
SMARCC1-208ENST00000492896 PDE4BQ07343 736 aa10.69□□□□□ -0.7
SMARCC1-208ENST00000492896 CC2D2BQ6DHV5 1058 aa10.69□□□□□ -0.7
SMARCC1-208ENST00000492896 USP48Q86UV5 1035 aa10.69□□□□□ -0.7
SMARCC1-208ENST00000492896 FERMT3Q86UX7 667 aa10.69□□□□□ -0.7
SMARCC1-208ENST00000492896 IQCA1Q86XH1 822 aa10.69□□□□□ -0.7
SMARCC1-208ENST00000492896 TMTC2Q8N394 836 aa10.69□□□□□ -0.7
SMARCC1-208ENST00000492896 GPT2Q8TD30 523 aa10.69□□□□□ -0.7
SMARCC1-208ENST00000492896 SLC16A10Q8TF71 515 aa10.69□□□□□ -0.7
SMARCC1-208ENST00000492896 FAM163AQ96GL9 167 aaPredicted RBP10.69□□□□□ -0.7
SMARCC1-208ENST00000492896 ZKSCAN3Q9BRR0 538 aa10.69□□□□□ -0.7
SMARCC1-208ENST00000492896 SENP2Q9HC62 589 aa10.69□□□□□ -0.7
SMARCC1-208ENST00000492896 GDPD2Q9HCC8 539 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms