RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 ERO1BQ86YB8 467 aa15.6■□□□□ 0.09
SEC61A1-206ENST00000491668 SIRT2Q8IXJ6 389 aa15.6■□□□□ 0.09
SEC61A1-206ENST00000491668 FAM43AQ8N2R8 423 aa15.6■□□□□ 0.09
SEC61A1-206ENST00000491668 HOOK2Q96ED9 719 aa15.6■□□□□ 0.09
SEC61A1-206ENST00000491668 DOCK2Q92608 1830 aa15.59■□□□□ 0.09
SEC61A1-206ENST00000491668 MYO5AQ9Y4I1 1855 aaKnown RBP15.59■□□□□ 0.09
SEC61A1-206ENST00000491668 AK9Q5TCS8 1911 aa15.59■□□□□ 0.09
SEC61A1-206ENST00000491668 CYP2E1P05181 493 aaPredicted RBP15.59■□□□□ 0.09
SEC61A1-206ENST00000491668 GTF2A2P52657 109 aa15.59■□□□□ 0.09
SEC61A1-206ENST00000491668 MAP3K10Q02779 954 aa15.59■□□□□ 0.09
SEC61A1-206ENST00000491668 ZNF512BQ96KM6 892 aaPredicted RBP15.59■□□□□ 0.09
SEC61A1-206ENST00000491668 CCDC8Q9H0W5 538 aaPredicted RBP15.59■□□□□ 0.09
SEC61A1-206ENST00000491668 ZBTB40Q9NUA8 1239 aa15.59■□□□□ 0.09
SEC61A1-206ENST00000491668 EXOC6BQ9Y2D4 811 aa15.59■□□□□ 0.09
SEC61A1-206ENST00000491668 COG6Q9Y2V7 657 aa15.59■□□□□ 0.09
SEC61A1-206ENST00000491668 PPIL2Q13356 520 aa15.58■□□□□ 0.08
SEC61A1-206ENST00000491668 MOGSQ13724 837 aa15.58■□□□□ 0.08
SEC61A1-206ENST00000491668 PDE3AQ14432 1141 aa15.58■□□□□ 0.08
SEC61A1-206ENST00000491668 C20orf194Q5TEA3 1177 aa15.58■□□□□ 0.08
SEC61A1-206ENST00000491668 ADGRA1Q86SQ6 560 aa15.58■□□□□ 0.08
SEC61A1-206ENST00000491668 SLF2Q8IX21 1173 aa15.58■□□□□ 0.08
SEC61A1-206ENST00000491668 RAI14Q9P0K7 980 aa15.58■□□□□ 0.08
SEC61A1-206ENST00000491668 HPS5Q9UPZ3 1129 aa15.58■□□□□ 0.08
SEC61A1-206ENST00000491668 PPATQ06203 517 aa15.57■□□□□ 0.08
SEC61A1-206ENST00000491668 PICALMQ13492 652 aa15.57■□□□□ 0.08
SEC61A1-206ENST00000491668 TTC39AQ5SRH9 613 aa15.57■□□□□ 0.08
SEC61A1-206ENST00000491668 NOL9Q5SY16 702 aaKnown RBP15.57■□□□□ 0.08
SEC61A1-206ENST00000491668 PIH1D3Q9NQM4 214 aaKnown RBP15.57■□□□□ 0.08
SEC61A1-206ENST00000491668 BTBD19C9JJ37 291 aa15.56■□□□□ 0.08
SEC61A1-206ENST00000491668 NPM3O75607 178 aaKnown RBP15.56■□□□□ 0.08
SEC61A1-206ENST00000491668 ZAP70P43403 619 aa15.56■□□□□ 0.08
SEC61A1-206ENST00000491668 GSTO1P78417 241 aa15.56■□□□□ 0.08
SEC61A1-206ENST00000491668 PKN2Q16513 984 aaKnown RBP15.56■□□□□ 0.08
SEC61A1-206ENST00000491668 CCDC158Q5M9N0 1113 aa15.56■□□□□ 0.08
SEC61A1-206ENST00000491668 OTUD7BQ6GQQ9 843 aa15.56■□□□□ 0.08
SEC61A1-206ENST00000491668 LRP2BPQ9P2M1 347 aa15.56■□□□□ 0.08
SEC61A1-206ENST00000491668 KCNH4Q9UQ05 1017 aa15.56■□□□□ 0.08
SEC61A1-206ENST00000491668 NDUFB9Q9Y6M9 179 aa15.56■□□□□ 0.08
SEC61A1-206ENST00000491668 MAST2Q6P0Q8 1798 aa15.55■□□□□ 0.08
SEC61A1-206ENST00000491668 LDHCP07864 332 aa15.55■□□□□ 0.08
SEC61A1-206ENST00000491668 CETPP11597 493 aa15.55■□□□□ 0.08
SEC61A1-206ENST00000491668 SNAPC2Q13487 334 aa15.55■□□□□ 0.08
SEC61A1-206ENST00000491668 FBXO46Q6PJ61 603 aaPredicted RBP15.55■□□□□ 0.08
SEC61A1-206ENST00000491668 OTOP1Q7RTM1 612 aa15.55■□□□□ 0.08
SEC61A1-206ENST00000491668 CD99L2Q8TCZ2 262 aa15.55■□□□□ 0.08
SEC61A1-206ENST00000491668 SH3RF3Q8TEJ3 882 aaPredicted RBP15.55■□□□□ 0.08
SEC61A1-206ENST00000491668 FAM196BA6NMK8 535 aa15.54■□□□□ 0.08
SEC61A1-206ENST00000491668 SOX10P56693 466 aa15.54■□□□□ 0.08
SEC61A1-206ENST00000491668 TAF1CQ15572 869 aaPredicted RBP15.54■□□□□ 0.08
SEC61A1-206ENST00000491668 ZSCAN29Q8IWY8 852 aaPredicted RBP15.54■□□□□ 0.08
SEC61A1-206ENST00000491668 CHMP4BQ9H444 224 aaKnown RBP15.54■□□□□ 0.08
SEC61A1-206ENST00000491668 IL1RAPL2Q9NP60 686 aa15.54■□□□□ 0.08
SEC61A1-206ENST00000491668 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.54■□□□□ 0.08
SEC61A1-206ENST00000491668 DDX19BQ9UMR2 479 aa15.54■□□□□ 0.08
SEC61A1-206ENST00000491668 COL2A1P02458 1487 aaPredicted RBP15.53■□□□□ 0.08
SEC61A1-206ENST00000491668 CDK5RAP2Q96SN8 1893 aa15.53■□□□□ 0.08
SEC61A1-206ENST00000491668 SIPA1L1O43166 1804 aa15.53■□□□□ 0.08
SEC61A1-206ENST00000491668 MAP4K4O95819 1239 aaPredicted RBP15.53■□□□□ 0.08
SEC61A1-206ENST00000491668 PPP4CP60510 307 aa15.53■□□□□ 0.08
SEC61A1-206ENST00000491668 SP3Q02447 781 aa15.53■□□□□ 0.08
SEC61A1-206ENST00000491668 RRP1BQ14684 758 aaKnown RBP15.53■□□□□ 0.08
SEC61A1-206ENST00000491668 NAA16Q6N069 864 aaPredicted RBP15.53■□□□□ 0.08
SEC61A1-206ENST00000491668 AACSQ86V21 672 aa15.53■□□□□ 0.08
SEC61A1-206ENST00000491668 RPAP2Q8IXW5 612 aaPredicted RBP15.53■□□□□ 0.08
SEC61A1-206ENST00000491668 SCYL3Q8IZE3 742 aa15.53■□□□□ 0.08
SEC61A1-206ENST00000491668 RHPN1Q8TCX5 695 aa15.53■□□□□ 0.08
SEC61A1-206ENST00000491668 OSBPL5Q9H0X9 879 aaPredicted RBP15.53■□□□□ 0.08
SEC61A1-206ENST00000491668 ANTXR1Q9H6X2 564 aa15.53■□□□□ 0.08
SEC61A1-206ENST00000491668 TRIM17Q9Y577 477 aa15.53■□□□□ 0.08
SEC61A1-206ENST00000491668 ZSWIM8A7E2V4 1837 aa15.52■□□□□ 0.08
SEC61A1-206ENST00000491668 PHIPQ8WWQ0 1821 aa15.52■□□□□ 0.08
SEC61A1-206ENST00000491668 BRCA2P51587 3418 aa15.52■□□□□ 0.08
SEC61A1-206ENST00000491668 PTPRAP18433 802 aa15.52■□□□□ 0.08
SEC61A1-206ENST00000491668 GPAT2Q6NUI2 795 aa15.52■□□□□ 0.08
SEC61A1-206ENST00000491668 ERC1Q8IUD2 1116 aa15.52■□□□□ 0.08
SEC61A1-206ENST00000491668 TEX11Q8IYF3 940 aa15.52■□□□□ 0.08
SEC61A1-206ENST00000491668 ZFYVE28Q9HCC9 887 aa15.52■□□□□ 0.08
SEC61A1-206ENST00000491668 ZCCHC17Q9NP64 241 aaKnown RBP15.52■□□□□ 0.08
SEC61A1-206ENST00000491668 AATFQ9NY61 560 aaKnown RBP eCLIP15.52■□□□□ 0.08
SEC61A1-206ENST00000491668 ADGRA2Q96PE1 1338 aa15.51■□□□□ 0.07
SEC61A1-206ENST00000491668 DOCK1Q14185 1865 aa15.51■□□□□ 0.07
SEC61A1-206ENST00000491668 TBC1D12O60347 775 aa15.51■□□□□ 0.07
SEC61A1-206ENST00000491668 TLR2O60603 784 aa15.51■□□□□ 0.07
SEC61A1-206ENST00000491668 CTNND1O60716 968 aaKnown RBP15.51■□□□□ 0.07
SEC61A1-206ENST00000491668 NEFLP07196 543 aa15.51■□□□□ 0.07
SEC61A1-206ENST00000491668 ANKRD23Q86SG2 305 aa15.51■□□□□ 0.07
SEC61A1-206ENST00000491668 CCDC84Q86UT8 332 aaPredicted RBP15.51■□□□□ 0.07
SEC61A1-206ENST00000491668 ERO1AQ96HE7 468 aa15.51■□□□□ 0.07
SEC61A1-206ENST00000491668 AFG3L2Q9Y4W6 797 aa15.51■□□□□ 0.07
SEC61A1-206ENST00000491668 ZHX2Q9Y6X8 837 aa15.51■□□□□ 0.07
SEC61A1-206ENST00000491668 FOCADQ5VW36 1801 aa15.5■□□□□ 0.07
SEC61A1-206ENST00000491668 APBB1O00213 710 aa15.5■□□□□ 0.07
SEC61A1-206ENST00000491668 PDHXO00330 501 aa15.5■□□□□ 0.07
SEC61A1-206ENST00000491668 CXCL11O14625 94 aa15.5■□□□□ 0.07
SEC61A1-206ENST00000491668 DYNLL1P63167 89 aaKnown RBP15.5■□□□□ 0.07
SEC61A1-206ENST00000491668 IRX6P78412 446 aaPredicted RBP15.5■□□□□ 0.07
SEC61A1-206ENST00000491668 MLLT1Q03111 559 aaPredicted RBP15.5■□□□□ 0.07
SEC61A1-206ENST00000491668 ARHGAP39Q9C0H5 1083 aa15.5■□□□□ 0.07
SEC61A1-206ENST00000491668 PTPN22Q9Y2R2 807 aa15.5■□□□□ 0.07
SEC61A1-206ENST00000491668 PTPRFP10586 1907 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms