RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 SMG8Q8ND04 991 aaKnown RBP6.31□□□□□ -1.4
CD46-216ENST00000490278 EAF1Q96JC9 268 aaPredicted RBP6.31□□□□□ -1.4
CD46-216ENST00000490278 TINF2Q9BSI4 451 aa6.31□□□□□ -1.4
CD46-216ENST00000490278 NT5C1AQ9BXI3 368 aa6.31□□□□□ -1.4
CD46-216ENST00000490278 SUGCTQ9HAC7 445 aa6.31□□□□□ -1.4
CD46-216ENST00000490278 CILPO75339 1184 aa6.3□□□□□ -1.4
CD46-216ENST00000490278 ALX3O95076 343 aa6.3□□□□□ -1.4
CD46-216ENST00000490278 PROCP04070 461 aa6.3□□□□□ -1.4
CD46-216ENST00000490278 RPL6Q02878 288 aaKnown RBP6.3□□□□□ -1.4
CD46-216ENST00000490278 APOBRQ0VD83 1088 aa6.3□□□□□ -1.4
CD46-216ENST00000490278 MPP2Q14168 576 aa6.3□□□□□ -1.4
CD46-216ENST00000490278 AKAP4Q5JQC9 854 aa6.3□□□□□ -1.4
CD46-216ENST00000490278 ANKRD34AQ69YU3 496 aa6.3□□□□□ -1.4
CD46-216ENST00000490278 FDX2Q6P4F2 183 aa6.3□□□□□ -1.4
CD46-216ENST00000490278 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.3□□□□□ -1.4
CD46-216ENST00000490278 GPRASP2Q96D09 838 aa6.3□□□□□ -1.4
CD46-216ENST00000490278 SPATA32Q96LK8 384 aa6.3□□□□□ -1.4
CD46-216ENST00000490278 LRRC3Q9BY71 257 aa6.3□□□□□ -1.4
CD46-216ENST00000490278 UBP1Q9NZI7 540 aa6.3□□□□□ -1.4
CD46-216ENST00000490278 ID3Q02535 119 aa6.29□□□□□ -1.4
CD46-216ENST00000490278 ADGRE1Q14246 886 aa6.29□□□□□ -1.4
CD46-216ENST00000490278 CWF19L2Q2TBE0 894 aaKnown RBP6.29□□□□□ -1.4
CD46-216ENST00000490278 ZC3H12AQ5D1E8 599 aaKnown RBP6.29□□□□□ -1.4
CD46-216ENST00000490278 C12orf50Q8NA57 414 aaPredicted RBP6.29□□□□□ -1.4
CD46-216ENST00000490278 FBXO27Q8NI29 283 aa6.29□□□□□ -1.4
CD46-216ENST00000490278 ELMO3Q96BJ8 720 aa6.29□□□□□ -1.4
CD46-216ENST00000490278 PCDHGC5Q9Y5F6 944 aa6.29□□□□□ -1.4
CD46-216ENST00000490278 SNCAIPQ9Y6H5 919 aa6.29□□□□□ -1.4
CD46-216ENST00000490278 KRBA1A5PL33 1030 aa6.28□□□□□ -1.4
CD46-216ENST00000490278 TMPRSS2O15393 492 aa6.28□□□□□ -1.4
CD46-216ENST00000490278 TLR3O15455 904 aaKnown RBP6.28□□□□□ -1.4
CD46-216ENST00000490278 ADH5P11766 374 aa6.28□□□□□ -1.4
CD46-216ENST00000490278 CRKP46108 304 aa6.28□□□□□ -1.4
CD46-216ENST00000490278 IREB2P48200 963 aaKnown RBP6.28□□□□□ -1.4
CD46-216ENST00000490278 SOX4Q06945 474 aaPredicted RBP6.28□□□□□ -1.4
CD46-216ENST00000490278 INPP5AQ14642 412 aa6.28□□□□□ -1.4
CD46-216ENST00000490278 MBTPS1Q14703 1052 aa6.28□□□□□ -1.4
CD46-216ENST00000490278 WIPI1Q5MNZ9 446 aaPredicted RBP6.28□□□□□ -1.4
CD46-216ENST00000490278 LRFN4Q6PJG9 635 aa6.28□□□□□ -1.4
CD46-216ENST00000490278 HDXQ7Z353 690 aa6.28□□□□□ -1.4
CD46-216ENST00000490278 REC114Q7Z4M0 266 aa6.28□□□□□ -1.4
CD46-216ENST00000490278 VPS37DQ86XT2 251 aa6.28□□□□□ -1.4
CD46-216ENST00000490278 Q8N3U1 123 aa6.28□□□□□ -1.4
CD46-216ENST00000490278 SLC43A3Q8NBI5 491 aa6.28□□□□□ -1.4
CD46-216ENST00000490278 RASGRP4Q8TDF6 673 aa6.28□□□□□ -1.4
CD46-216ENST00000490278 WFDC12Q8WWY7 111 aa6.28□□□□□ -1.4
CD46-216ENST00000490278 NKD1Q969G9 470 aa6.28□□□□□ -1.4
CD46-216ENST00000490278 PLPPR2Q96GM1 343 aa6.28□□□□□ -1.4
CD46-216ENST00000490278 CEP41Q9BYV8 373 aa6.28□□□□□ -1.4
CD46-216ENST00000490278 PPP1R9AQ9ULJ8 1098 aa6.28□□□□□ -1.4
CD46-216ENST00000490278 AP4E1Q9UPM8 1137 aa6.28□□□□□ -1.4
CD46-216ENST00000490278 DCDC2CA8MYV0 355 aa6.27□□□□□ -1.41
CD46-216ENST00000490278 GFRA2O00451 464 aa6.27□□□□□ -1.41
CD46-216ENST00000490278 TIAF1O95411 115 aa6.27□□□□□ -1.41
CD46-216ENST00000490278 DRD2P14416 443 aa6.27□□□□□ -1.41
CD46-216ENST00000490278 GLB1P16278 677 aa6.27□□□□□ -1.41
CD46-216ENST00000490278 NOS3P29474 1203 aa6.27□□□□□ -1.41
CD46-216ENST00000490278 CDK8P49336 464 aa6.27□□□□□ -1.41
CD46-216ENST00000490278 ERVK-24P63145 666 aa6.27□□□□□ -1.41
CD46-216ENST00000490278 SEZ6Q53EL9 994 aa6.27□□□□□ -1.41
CD46-216ENST00000490278 Q6ZS46 218 aa6.27□□□□□ -1.41
CD46-216ENST00000490278 CRIM1Q9NZV1 1036 aa6.27□□□□□ -1.41
CD46-216ENST00000490278 K7ELQ4 463 aaPredicted RBP6.26□□□□□ -1.41
CD46-216ENST00000490278 SART1O43290 800 aaKnown RBP6.26□□□□□ -1.41
CD46-216ENST00000490278 CYFIP1Q7L576 1253 aa6.26□□□□□ -1.41
CD46-216ENST00000490278 DYMQ7RTS9 669 aa6.26□□□□□ -1.41
CD46-216ENST00000490278 TXNRD3Q86VQ6 643 aa6.26□□□□□ -1.41
CD46-216ENST00000490278 C12orf40Q86WS4 652 aa6.26□□□□□ -1.41
CD46-216ENST00000490278 SLITRK4Q8IW52 837 aa6.26□□□□□ -1.41
CD46-216ENST00000490278 C2CD4AQ8NCU7 369 aaPredicted RBP6.26□□□□□ -1.41
CD46-216ENST00000490278 FANCD2OSQ96PS1 177 aa6.26□□□□□ -1.41
CD46-216ENST00000490278 ATXN3LQ9H3M9 355 aa6.26□□□□□ -1.41
CD46-216ENST00000490278 HIF3AQ9Y2N7 669 aa6.26□□□□□ -1.41
CD46-216ENST00000490278 CSADQ9Y600 493 aa6.26□□□□□ -1.41
CD46-216ENST00000490278 TACC3Q9Y6A5 838 aa6.26□□□□□ -1.41
CD46-216ENST00000490278 PRAMEF27A3QJZ7 478 aa6.25□□□□□ -1.41
CD46-216ENST00000490278 C1QTNF9BB2RNN3 333 aa6.25□□□□□ -1.41
CD46-216ENST00000490278 MCM4P33991 863 aa6.25□□□□□ -1.41
CD46-216ENST00000490278 CHRNA4P43681 627 aa6.25□□□□□ -1.41
CD46-216ENST00000490278 PREPP48147 710 aa6.25□□□□□ -1.41
CD46-216ENST00000490278 ARID5AQ03989 594 aa6.25□□□□□ -1.41
CD46-216ENST00000490278 RING1Q06587 406 aa6.25□□□□□ -1.41
CD46-216ENST00000490278 COL9A2Q14055 689 aaPredicted RBP6.25□□□□□ -1.41
CD46-216ENST00000490278 CD163Q86VB7 1156 aa6.25□□□□□ -1.41
CD46-216ENST00000490278 SEC16BQ96JE7 1060 aa6.25□□□□□ -1.41
CD46-216ENST00000490278 UBL7Q96S82 380 aaPredicted RBP6.25□□□□□ -1.41
CD46-216ENST00000490278 GSX1Q9H4S2 264 aaPredicted RBP6.25□□□□□ -1.41
CD46-216ENST00000490278 BRMS1Q9HCU9 246 aa6.25□□□□□ -1.41
CD46-216ENST00000490278 PICK1Q9NRD5 415 aa6.25□□□□□ -1.41
CD46-216ENST00000490278 DISC1Q9NRI5 854 aa6.25□□□□□ -1.41
CD46-216ENST00000490278 GINM1Q9NU53 330 aa6.25□□□□□ -1.41
CD46-216ENST00000490278 EFR3BQ9Y2G0 817 aa6.25□□□□□ -1.41
CD46-216ENST00000490278 GAS2O43903 313 aaKnown RBP6.24□□□□□ -1.41
CD46-216ENST00000490278 ATF4P18848 351 aaPredicted RBP6.24□□□□□ -1.41
CD46-216ENST00000490278 DNAJA1P31689 397 aaKnown RBP6.24□□□□□ -1.41
CD46-216ENST00000490278 ASPAP45381 313 aa6.24□□□□□ -1.41
CD46-216ENST00000490278 SOX9P48436 509 aa6.24□□□□□ -1.41
CD46-216ENST00000490278 ZNF165P49910 485 aa6.24□□□□□ -1.41
CD46-216ENST00000490278 UVSSAQ2YD98 709 aa6.24□□□□□ -1.41
CD46-216ENST00000490278 PPM1JQ5JR12 505 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms