RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 TMED8Q6PL24 325 aaPredicted RBP17.4■□□□□ 0.38
HLA-F-229ENST00000489502 C2orf69Q8N8R5 385 aa17.4■□□□□ 0.38
HLA-F-229ENST00000489502 TGFBRAP1Q8WUH2 860 aa17.4■□□□□ 0.38
HLA-F-229ENST00000489502 EVI5LQ96CN4 794 aa17.4■□□□□ 0.38
HLA-F-229ENST00000489502 TLL2Q9Y6L7 1015 aa17.4■□□□□ 0.38
HLA-F-229ENST00000489502 MYH1P12882 1939 aa17.4■□□□□ 0.38
HLA-F-229ENST00000489502 RNF113AO15541 343 aaKnown RBP17.39■□□□□ 0.37
HLA-F-229ENST00000489502 GSPT1P15170 499 aaKnown RBP17.39■□□□□ 0.37
HLA-F-229ENST00000489502 HUNKP57058 714 aa17.39■□□□□ 0.37
HLA-F-229ENST00000489502 SLC4A8Q2Y0W8 1093 aa17.39■□□□□ 0.37
HLA-F-229ENST00000489502 TTC22Q5TAA0 569 aa17.39■□□□□ 0.37
HLA-F-229ENST00000489502 ERICH6BQ5W0A0 696 aa17.39■□□□□ 0.37
HLA-F-229ENST00000489502 SH3BP5LQ7L8J4 393 aa17.39■□□□□ 0.37
HLA-F-229ENST00000489502 ZSCAN29Q8IWY8 852 aaPredicted RBP17.39■□□□□ 0.37
HLA-F-229ENST00000489502 RILPL2Q969X0 211 aa17.39■□□□□ 0.37
HLA-F-229ENST00000489502 PUS7LQ9H0K6 701 aaKnown RBP17.39■□□□□ 0.37
HLA-F-229ENST00000489502 OSBPL5Q9H0X9 879 aaPredicted RBP17.39■□□□□ 0.37
HLA-F-229ENST00000489502 MKRN1Q9UHC7 482 aaKnown RBP17.39■□□□□ 0.37
HLA-F-229ENST00000489502 COL2A1P02458 1487 aaPredicted RBP17.38■□□□□ 0.37
HLA-F-229ENST00000489502 DDTLA6NHG4 134 aaPredicted RBP17.38■□□□□ 0.37
HLA-F-229ENST00000489502 M0R2C6 588 aa17.38■□□□□ 0.37
HLA-F-229ENST00000489502 SLURP2P0DP57 97 aa17.38■□□□□ 0.37
HLA-F-229ENST00000489502 USP5P45974 858 aa17.38■□□□□ 0.37
HLA-F-229ENST00000489502 SUPT20HL1Q3ZLR7 823 aa17.38■□□□□ 0.37
HLA-F-229ENST00000489502 PAXIP1Q6ZW49 1069 aaPredicted RBP17.38■□□□□ 0.37
HLA-F-229ENST00000489502 SAPCD2Q86UD0 394 aa17.38■□□□□ 0.37
HLA-F-229ENST00000489502 APPBP2Q92624 585 aa17.38■□□□□ 0.37
HLA-F-229ENST00000489502 OSBP2Q969R2 916 aa17.38■□□□□ 0.37
HLA-F-229ENST00000489502 CSRNP1Q96S65 589 aa17.38■□□□□ 0.37
HLA-F-229ENST00000489502 SAP30BPQ9UHR5 308 aaKnown RBP17.38■□□□□ 0.37
HLA-F-229ENST00000489502 ANGEL1Q9UNK9 670 aaKnown RBP17.38■□□□□ 0.37
HLA-F-229ENST00000489502 BAZ2AQ9UIF9 1905 aaKnown RBP17.38■□□□□ 0.37
HLA-F-229ENST00000489502 ATRNL1Q5VV63 1379 aa17.38■□□□□ 0.37
HLA-F-229ENST00000489502 UBE2Q2LH0YL09 131 aa17.37■□□□□ 0.37
HLA-F-229ENST00000489502 ZFYP08048 801 aaPredicted RBP17.37■□□□□ 0.37
HLA-F-229ENST00000489502 CERS3Q8IU89 383 aa17.37■□□□□ 0.37
HLA-F-229ENST00000489502 SDR42E1Q8WUS8 393 aa17.37■□□□□ 0.37
HLA-F-229ENST00000489502 AIDAQ96BJ3 306 aa17.37■□□□□ 0.37
HLA-F-229ENST00000489502 SEC62Q99442 399 aaKnown RBP17.37■□□□□ 0.37
HLA-F-229ENST00000489502 CRNKL1Q9BZJ0 848 aaKnown RBP17.37■□□□□ 0.37
HLA-F-229ENST00000489502 RASSF10A6NK89 507 aa17.36■□□□□ 0.37
HLA-F-229ENST00000489502 PRKAB2O43741 272 aa17.36■□□□□ 0.37
HLA-F-229ENST00000489502 NPM3O75607 178 aaKnown RBP17.36■□□□□ 0.37
HLA-F-229ENST00000489502 FKBP1BP68106 108 aa17.36■□□□□ 0.37
HLA-F-229ENST00000489502 GRM1Q13255 1194 aa17.36■□□□□ 0.37
HLA-F-229ENST00000489502 LRRFIP1Q32MZ4 808 aaKnown RBP17.36■□□□□ 0.37
HLA-F-229ENST00000489502 MIGA2Q7L4E1 593 aa17.36■□□□□ 0.37
HLA-F-229ENST00000489502 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.36■□□□□ 0.37
HLA-F-229ENST00000489502 A0A0D9SFI3 127 aa17.35■□□□□ 0.37
HLA-F-229ENST00000489502 FAM196BA6NMK8 535 aa17.35■□□□□ 0.37
HLA-F-229ENST00000489502 GPAA1O43292 621 aa17.35■□□□□ 0.37
HLA-F-229ENST00000489502 PPP1R12BO60237 982 aaPredicted RBP17.35■□□□□ 0.37
HLA-F-229ENST00000489502 ZMYM1Q5SVZ6 1142 aa17.35■□□□□ 0.37
HLA-F-229ENST00000489502 ARMC9Q7Z3E5 817 aa17.35■□□□□ 0.37
HLA-F-229ENST00000489502 USP2O75604 605 aaPredicted RBP17.34■□□□□ 0.37
HLA-F-229ENST00000489502 NMIQ13287 307 aaPredicted RBP17.34■□□□□ 0.37
HLA-F-229ENST00000489502 CYP4F22Q6NT55 531 aa17.34■□□□□ 0.37
HLA-F-229ENST00000489502 CCDC129Q6ZRS4 1044 aa17.34■□□□□ 0.37
HLA-F-229ENST00000489502 CLMNQ96JQ2 1002 aa17.34■□□□□ 0.37
HLA-F-229ENST00000489502 FAM227BQ96M60 508 aa17.34■□□□□ 0.37
HLA-F-229ENST00000489502 THSD7BQ9C0I4 1608 aa17.34■□□□□ 0.37
HLA-F-229ENST00000489502 PALD1Q9ULE6 856 aa17.34■□□□□ 0.37
HLA-F-229ENST00000489502 LAMB1P07942 1786 aa17.33■□□□□ 0.37
HLA-F-229ENST00000489502 SDSP20132 328 aa17.33■□□□□ 0.36
HLA-F-229ENST00000489502 IREB2P48200 963 aaKnown RBP17.33■□□□□ 0.36
HLA-F-229ENST00000489502 EVX2Q03828 476 aa17.33■□□□□ 0.36
HLA-F-229ENST00000489502 DCAF15Q66K64 600 aa17.33■□□□□ 0.36
HLA-F-229ENST00000489502 HOOK2Q96ED9 719 aa17.33■□□□□ 0.36
HLA-F-229ENST00000489502 WRNIP1Q96S55 665 aa17.33■□□□□ 0.36
HLA-F-229ENST00000489502 DCP1AQ9NPI6 582 aaPredicted RBP17.33■□□□□ 0.36
HLA-F-229ENST00000489502 SLC4A4Q9Y6R1 1079 aa17.33■□□□□ 0.36
HLA-F-229ENST00000489502 MAP3K11Q16584 847 aa17.32■□□□□ 0.36
HLA-F-229ENST00000489502 DEFB115Q30KQ5 88 aa17.32■□□□□ 0.36
HLA-F-229ENST00000489502 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.32■□□□□ 0.367e-9■■□□□ 12.7
HLA-F-229ENST00000489502 CAPNS2Q96L46 248 aa17.32■□□□□ 0.36
HLA-F-229ENST00000489502 STRBPQ96SI9 672 aaKnown RBP17.32■□□□□ 0.36
HLA-F-229ENST00000489502 ZNF341Q9BYN7 854 aa17.32■□□□□ 0.36
HLA-F-229ENST00000489502 DOCK1Q14185 1865 aa17.32■□□□□ 0.36
HLA-F-229ENST00000489502 ATAD5Q96QE3 1844 aa17.31■□□□□ 0.36
HLA-F-229ENST00000489502 CYP2D6P10635 497 aa17.31■□□□□ 0.36
HLA-F-229ENST00000489502 INPP5BP32019 993 aa17.31■□□□□ 0.36
HLA-F-229ENST00000489502 VEGFBP49765 207 aa17.31■□□□□ 0.36
HLA-F-229ENST00000489502 ZNF157P51786 506 aaPredicted RBP17.31■□□□□ 0.36
HLA-F-229ENST00000489502 LDLRAD1Q5T700 205 aa17.31■□□□□ 0.36
HLA-F-229ENST00000489502 RGMBQ6NW40 437 aa17.31■□□□□ 0.36
HLA-F-229ENST00000489502 RASAL3Q86YV0 1011 aa17.31■□□□□ 0.36
HLA-F-229ENST00000489502 KLRG1Q96E93 195 aa17.31■□□□□ 0.36
HLA-F-229ENST00000489502 DHX36Q9H2U1 1008 aaKnown RBP17.31■□□□□ 0.36
HLA-F-229ENST00000489502 EPB41L4AQ9HCS5 686 aaPredicted RBP17.31■□□□□ 0.36
HLA-F-229ENST00000489502 DIAPH3Q9NSV4 1193 aa17.31■□□□□ 0.36
HLA-F-229ENST00000489502 MCM9Q9NXL9 1143 aa17.31■□□□□ 0.36
HLA-F-229ENST00000489502 CYP2D7A0A087X1C5 515 aa17.3■□□□□ 0.36
HLA-F-229ENST00000489502 HLA-DOAP06340 250 aa17.3■□□□□ 0.36
HLA-F-229ENST00000489502 MKRN3Q13064 507 aaKnown RBP17.3■□□□□ 0.36
HLA-F-229ENST00000489502 VGLL4Q14135 290 aa17.3■□□□□ 0.36
HLA-F-229ENST00000489502 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.3■□□□□ 0.36
HLA-F-229ENST00000489502 ZNF589Q86UQ0 364 aaPredicted RBP17.3■□□□□ 0.36
HLA-F-229ENST00000489502 DNAJC5GQ8N7S2 189 aa17.3■□□□□ 0.36
HLA-F-229ENST00000489502 HHIPL1Q96JK4 782 aa17.3■□□□□ 0.36
HLA-F-229ENST00000489502 DNAJC18Q9H819 358 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms