RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 IRS4O14654 1257 aaPredicted RBP10.01□□□□□ -0.81
VTI1A-207ENST00000489357 LETM1O95202 739 aaPredicted RBP10.01□□□□□ -0.81
VTI1A-207ENST00000489357 GTF2E1P29083 439 aaPredicted RBP10.01□□□□□ -0.81
VTI1A-207ENST00000489357 ALDH1B1P30837 517 aa10.01□□□□□ -0.81
VTI1A-207ENST00000489357 GORABQ5T7V8 394 aa10.01□□□□□ -0.81
VTI1A-207ENST00000489357 METTL3Q86U44 580 aaKnown RBP10.01□□□□□ -0.81
VTI1A-207ENST00000489357 ZNF589Q86UQ0 364 aaPredicted RBP10.01□□□□□ -0.81
VTI1A-207ENST00000489357 ZNF784Q8NCA9 323 aaPredicted RBP10.01□□□□□ -0.81
VTI1A-207ENST00000489357 ANP32BQ92688 251 aaKnown RBP10.01□□□□□ -0.81
VTI1A-207ENST00000489357 NEK1Q96PY6 1258 aa10.01□□□□□ -0.81
VTI1A-207ENST00000489357 DNAJC2Q99543 621 aaKnown RBP10.01□□□□□ -0.81
VTI1A-207ENST00000489357 MYH7P12883 1935 aa10.01□□□□□ -0.81
VTI1A-207ENST00000489357 WDR19Q8NEZ3 1342 aa10.01□□□□□ -0.81
VTI1A-207ENST00000489357 COL4A1P02462 1669 aa10□□□□□ -0.81
VTI1A-207ENST00000489357 GOLIM4O00461 696 aa10□□□□□ -0.81
VTI1A-207ENST00000489357 TRIM66O15016 1216 aa10□□□□□ -0.81
VTI1A-207ENST00000489357 HRO43593 1189 aa10□□□□□ -0.81
VTI1A-207ENST00000489357 UQCRFS1P1P0C7P4 283 aa10□□□□□ -0.81
VTI1A-207ENST00000489357 XRCC6P12956 609 aaKnown RBP eCLIP10□□□□□ -0.81
VTI1A-207ENST00000489357 SYT1P21579 422 aa10□□□□□ -0.81
VTI1A-207ENST00000489357 ITGA6P23229 1130 aa10□□□□□ -0.81
VTI1A-207ENST00000489357 ATP2B3Q16720 1220 aa10□□□□□ -0.81
VTI1A-207ENST00000489357 LRRC24Q50LG9 513 aa10□□□□□ -0.81
VTI1A-207ENST00000489357 TTC39AQ5SRH9 613 aa10□□□□□ -0.81
VTI1A-207ENST00000489357 LDHAL6AQ6ZMR3 332 aa10□□□□□ -0.81
VTI1A-207ENST00000489357 JARID2Q92833 1246 aaPredicted RBP10□□□□□ -0.81
VTI1A-207ENST00000489357 AGXT2Q9BYV1 514 aa10□□□□□ -0.81
VTI1A-207ENST00000489357 GZF1Q9H116 711 aaPredicted RBP10□□□□□ -0.81
VTI1A-207ENST00000489357 IGSF3O75054 1194 aa9.99□□□□□ -0.81
VTI1A-207ENST00000489357 PRPF40AO75400 957 aaKnown RBP9.99□□□□□ -0.81
VTI1A-207ENST00000489357 BBOX1O75936 387 aa9.99□□□□□ -0.81
VTI1A-207ENST00000489357 PDE8BO95263 885 aa9.99□□□□□ -0.81
VTI1A-207ENST00000489357 F13A1P00488 732 aa9.99□□□□□ -0.81
VTI1A-207ENST00000489357 TIMM10P62072 90 aa9.99□□□□□ -0.81
VTI1A-207ENST00000489357 PUM3Q15397 648 aaKnown RBP9.99□□□□□ -0.81
VTI1A-207ENST00000489357 ME3Q16798 604 aa9.99□□□□□ -0.81
VTI1A-207ENST00000489357 DDX46Q7L014 1031 aaKnown RBP9.99□□□□□ -0.81
VTI1A-207ENST00000489357 DHX32Q7L7V1 743 aaKnown RBP9.99□□□□□ -0.81
VTI1A-207ENST00000489357 VGLL2Q8N8G2 317 aa9.99□□□□□ -0.81
VTI1A-207ENST00000489357 APPBP2Q92624 585 aa9.99□□□□□ -0.81
VTI1A-207ENST00000489357 ZNF622Q969S3 477 aaKnown RBP eCLIP9.99□□□□□ -0.81
VTI1A-207ENST00000489357 XAGE2Q96GT9 111 aa9.99□□□□□ -0.81
VTI1A-207ENST00000489357 SEPT9Q9UHD8 586 aaPredicted RBP9.99□□□□□ -0.81
VTI1A-207ENST00000489357 ZMYM6O95789 1325 aa9.99□□□□□ -0.81
VTI1A-207ENST00000489357 LTBP3Q9NS15 1303 aa9.99□□□□□ -0.81
VTI1A-207ENST00000489357 LRRC37AA6NMS7 1700 aa9.99□□□□□ -0.81
VTI1A-207ENST00000489357 NPHP1O15259 732 aa9.98□□□□□ -0.81
VTI1A-207ENST00000489357 GJB2P29033 226 aa9.98□□□□□ -0.81
VTI1A-207ENST00000489357 ARID4AP29374 1257 aaPredicted RBP9.98□□□□□ -0.81
VTI1A-207ENST00000489357 PRELPP51888 382 aa9.98□□□□□ -0.81
VTI1A-207ENST00000489357 EVCP57679 992 aa9.98□□□□□ -0.81
VTI1A-207ENST00000489357 UBE2HP62256 183 aa9.98□□□□□ -0.81
VTI1A-207ENST00000489357 HMGN5P82970 282 aaKnown RBP9.98□□□□□ -0.81
VTI1A-207ENST00000489357 TOB2Q14106 344 aaPredicted RBP9.98□□□□□ -0.81
VTI1A-207ENST00000489357 UBE3CQ15386 1083 aa9.98□□□□□ -0.81
VTI1A-207ENST00000489357 ZSCAN23Q3MJ62 389 aa9.98□□□□□ -0.81
VTI1A-207ENST00000489357 METTL24Q5JXM2 366 aa9.98□□□□□ -0.81
VTI1A-207ENST00000489357 TMED8Q6PL24 325 aaPredicted RBP9.98□□□□□ -0.81
VTI1A-207ENST00000489357 LAPTM4BQ86VI4 370 aa9.98□□□□□ -0.81
VTI1A-207ENST00000489357 FAM43AQ8N2R8 423 aa9.98□□□□□ -0.81
VTI1A-207ENST00000489357 LPIN2Q92539 896 aa9.98□□□□□ -0.81
VTI1A-207ENST00000489357 RBM17Q96I25 401 aaKnown RBP9.98□□□□□ -0.81
VTI1A-207ENST00000489357 PHOX2BQ99453 314 aa9.98□□□□□ -0.81
VTI1A-207ENST00000489357 MAST3O60307 1309 aa9.98□□□□□ -0.81
VTI1A-207ENST00000489357 ELP1O95163 1332 aa9.98□□□□□ -0.81
VTI1A-207ENST00000489357 LTBP1Q14766 1721 aa9.98□□□□□ -0.81
VTI1A-207ENST00000489357 RCCD1A6NED2 376 aa9.97□□□□□ -0.81
VTI1A-207ENST00000489357 NFKBIEO00221 500 aa9.97□□□□□ -0.81
VTI1A-207ENST00000489357 CYP21A2P08686 494 aa9.97□□□□□ -0.81
VTI1A-207ENST00000489357 HSPD1P10809 573 aaKnown RBP9.97□□□□□ -0.81
VTI1A-207ENST00000489357 CCDC173Q0VFZ6 552 aa9.97□□□□□ -0.81
VTI1A-207ENST00000489357 GRAPQ13588 217 aa9.97□□□□□ -0.81
VTI1A-207ENST00000489357 IMMTQ16891 758 aaKnown RBP9.97□□□□□ -0.81
VTI1A-207ENST00000489357 CCDC152Q4G0S7 254 aa9.97□□□□□ -0.81
VTI1A-207ENST00000489357 GRIPAP1Q4V328 841 aa9.97□□□□□ -0.81
VTI1A-207ENST00000489357 ATL3Q6DD88 541 aa9.97□□□□□ -0.81
VTI1A-207ENST00000489357 CC2D2BQ6DHV5 1058 aa9.97□□□□□ -0.81
VTI1A-207ENST00000489357 CAVIN1Q6NZI2 390 aaKnown RBP9.97□□□□□ -0.81
VTI1A-207ENST00000489357 ARHGAP27Q6ZUM4 889 aa9.97□□□□□ -0.81
VTI1A-207ENST00000489357 NOL8Q76FK4 1167 aaKnown RBP9.97□□□□□ -0.81
VTI1A-207ENST00000489357 CCDC83Q8IWF9 413 aa9.97□□□□□ -0.81
VTI1A-207ENST00000489357 SP8Q8IXZ3 490 aa9.97□□□□□ -0.81
VTI1A-207ENST00000489357 FAM184AQ8NB25 1140 aa9.97□□□□□ -0.81
VTI1A-207ENST00000489357 GRAPLQ8TC17 118 aaPredicted RBP9.97□□□□□ -0.81
VTI1A-207ENST00000489357 RPGRQ92834 1020 aaKnown RBP9.97□□□□□ -0.81
VTI1A-207ENST00000489357 GTF3C6Q969F1 213 aa9.97□□□□□ -0.81
VTI1A-207ENST00000489357 EDC3Q96F86 508 aaKnown RBP9.97□□□□□ -0.81
VTI1A-207ENST00000489357 ZNF274Q96GC6 653 aaPredicted RBP9.97□□□□□ -0.81
VTI1A-207ENST00000489357 ZNF594Q96JF6 807 aaPredicted RBP9.97□□□□□ -0.81
VTI1A-207ENST00000489357 PUS3Q9BZE2 481 aaKnown RBP9.97□□□□□ -0.81
VTI1A-207ENST00000489357 GREM2Q9H772 168 aa9.97□□□□□ -0.81
VTI1A-207ENST00000489357 CNNM1Q9NRU3 951 aa9.97□□□□□ -0.81
VTI1A-207ENST00000489357 PLSCR2Q9NRY7 297 aa9.97□□□□□ -0.81
VTI1A-207ENST00000489357 TPCN1Q9ULQ1 816 aa9.97□□□□□ -0.81
VTI1A-207ENST00000489357 MTMR6Q9Y217 621 aa9.97□□□□□ -0.81
VTI1A-207ENST00000489357 DOCK2Q92608 1830 aa9.97□□□□□ -0.81
VTI1A-207ENST00000489357 AKAP11Q9UKA4 1901 aa9.97□□□□□ -0.81
VTI1A-207ENST00000489357 LAMA4Q16363 1823 aa9.96□□□□□ -0.81
VTI1A-207ENST00000489357 C21orf2O43822 256 aa9.96□□□□□ -0.82
VTI1A-207ENST00000489357 DHX16O60231 1041 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms