RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 ITPRIPQ8IWB1 547 aa16.08■□□□□ 0.16
ATPAF2-207ENST00000488753 NSUN4Q96CB9 384 aaKnown RBP16.08■□□□□ 0.16
ATPAF2-207ENST00000488753 NOP58Q9Y2X3 529 aaKnown RBP16.08■□□□□ 0.16
ATPAF2-207ENST00000488753 CXCL11O14625 94 aa16.07■□□□□ 0.16
ATPAF2-207ENST00000488753 MCAMP43121 646 aa16.07■□□□□ 0.16
ATPAF2-207ENST00000488753 TNNI3KQ59H18 835 aa16.07■□□□□ 0.16
ATPAF2-207ENST00000488753 PI16Q6UXB8 463 aa16.07■□□□□ 0.16
ATPAF2-207ENST00000488753 SH3BP5LQ7L8J4 393 aa16.07■□□□□ 0.16
ATPAF2-207ENST00000488753 ANKRD23Q86SG2 305 aa16.07■□□□□ 0.16
ATPAF2-207ENST00000488753 ZSCAN29Q8IWY8 852 aaPredicted RBP16.07■□□□□ 0.16
ATPAF2-207ENST00000488753 SCYL3Q8IZE3 742 aa16.07■□□□□ 0.16
ATPAF2-207ENST00000488753 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.07■□□□□ 0.16
ATPAF2-207ENST00000488753 ZNF384Q8TF68 577 aa16.07■□□□□ 0.16
ATPAF2-207ENST00000488753 ZNF512BQ96KM6 892 aaPredicted RBP16.07■□□□□ 0.16
ATPAF2-207ENST00000488753 FPGT-TNNI3KV9GXZ4 949 aa16.07■□□□□ 0.16
ATPAF2-207ENST00000488753 SURF6O75683 361 aaKnown RBP16.06■□□□□ 0.16
ATPAF2-207ENST00000488753 RLBP1P12271 317 aa16.06■□□□□ 0.16
ATPAF2-207ENST00000488753 OS9Q13438 667 aaPredicted RBP16.06■□□□□ 0.16
ATPAF2-207ENST00000488753 CCDC158Q5M9N0 1113 aa16.06■□□□□ 0.16
ATPAF2-207ENST00000488753 ARMC5Q96C12 935 aa16.06■□□□□ 0.16
ATPAF2-207ENST00000488753 DDX4Q9NQI0 724 aaKnown RBP16.06■□□□□ 0.16
ATPAF2-207ENST00000488753 PICK1Q9NRD5 415 aa16.06■□□□□ 0.16
ATPAF2-207ENST00000488753 DDTLA6NHG4 134 aaPredicted RBP16.05■□□□□ 0.16
ATPAF2-207ENST00000488753 TBC1D12O60347 775 aa16.05■□□□□ 0.16
ATPAF2-207ENST00000488753 CTNND1O60716 968 aaKnown RBP16.05■□□□□ 0.16
ATPAF2-207ENST00000488753 GNRH1P01148 92 aa16.05■□□□□ 0.16
ATPAF2-207ENST00000488753 CAP1Q01518 475 aa16.05■□□□□ 0.16
ATPAF2-207ENST00000488753 KIF22Q14807 665 aa16.05■□□□□ 0.16
ATPAF2-207ENST00000488753 TBC1D9Q6ZT07 1266 aa16.05■□□□□ 0.16
ATPAF2-207ENST00000488753 RAI14Q9P0K7 980 aa16.05■□□□□ 0.16
ATPAF2-207ENST00000488753 LRP2BPQ9P2M1 347 aa16.05■□□□□ 0.16
ATPAF2-207ENST00000488753 MYH2Q9UKX2 1941 aa16.05■□□□□ 0.16
ATPAF2-207ENST00000488753 COL2A1P02458 1487 aaPredicted RBP16.04■□□□□ 0.16
ATPAF2-207ENST00000488753 PDHXO00330 501 aa16.04■□□□□ 0.16
ATPAF2-207ENST00000488753 PTPRAP18433 802 aa16.04■□□□□ 0.16
ATPAF2-207ENST00000488753 LACTBP83111 547 aaPredicted RBP16.04■□□□□ 0.16
ATPAF2-207ENST00000488753 PICALMQ13492 652 aa16.04■□□□□ 0.16
ATPAF2-207ENST00000488753 MOGSQ13724 837 aa16.04■□□□□ 0.16
ATPAF2-207ENST00000488753 TTC39AQ5SRH9 613 aa16.04■□□□□ 0.16
ATPAF2-207ENST00000488753 DBNDD2Q9BQY9 259 aa16.04■□□□□ 0.16
ATPAF2-207ENST00000488753 C1orf115Q9H7X2 142 aa16.04■□□□□ 0.16
ATPAF2-207ENST00000488753 CENPFP49454 3210 aa16.04■□□□□ 0.16
ATPAF2-207ENST00000488753 MS4A1P11836 297 aa16.03■□□□□ 0.16
ATPAF2-207ENST00000488753 C17orf99Q6UX52 265 aa16.03■□□□□ 0.16
ATPAF2-207ENST00000488753 A0A0G2JLL6 359 aaPredicted RBP16.02■□□□□ 0.16
ATPAF2-207ENST00000488753 BAG3O95817 575 aa16.02■□□□□ 0.16
ATPAF2-207ENST00000488753 PLCG2P16885 1265 aa16.02■□□□□ 0.16
ATPAF2-207ENST00000488753 PRMT2P55345 433 aa16.02■□□□□ 0.16
ATPAF2-207ENST00000488753 CEP85Q6P2H3 762 aa16.02■□□□□ 0.16
ATPAF2-207ENST00000488753 FASTKD5Q7L8L6 764 aaKnown RBP16.02■□□□□ 0.16
ATPAF2-207ENST00000488753 PRRT2Q7Z6L0 340 aaPredicted RBP16.02■□□□□ 0.16
ATPAF2-207ENST00000488753 NBPF11Q86T75 865 aa16.02■□□□□ 0.16
ATPAF2-207ENST00000488753 ERC1Q8IUD2 1116 aa16.02■□□□□ 0.16
ATPAF2-207ENST00000488753 PARK7Q99497 189 aaKnown RBP16.02■□□□□ 0.16
ATPAF2-207ENST00000488753 NOL10Q9BSC4 688 aaKnown RBP16.02■□□□□ 0.16
ATPAF2-207ENST00000488753 OSBPL5Q9H0X9 879 aaPredicted RBP16.02■□□□□ 0.16
ATPAF2-207ENST00000488753 AFG3L2Q9Y4W6 797 aa16.02■□□□□ 0.16
ATPAF2-207ENST00000488753 ZHX2Q9Y6X8 837 aa16.02■□□□□ 0.16
ATPAF2-207ENST00000488753 TNRC18O15417 2968 aaPredicted RBP16.02■□□□□ 0.15
ATPAF2-207ENST00000488753 ADGRA2Q96PE1 1338 aa16.01■□□□□ 0.15
ATPAF2-207ENST00000488753 PPP4CP60510 307 aa16.01■□□□□ 0.15
ATPAF2-207ENST00000488753 NAA16Q6N069 864 aaPredicted RBP16.01■□□□□ 0.15
ATPAF2-207ENST00000488753 TEX11Q8IYF3 940 aa16.01■□□□□ 0.15
ATPAF2-207ENST00000488753 DBNLQ9UJU6 430 aaKnown RBP16.01■□□□□ 0.15
ATPAF2-207ENST00000488753 SLC45A1Q9Y2W3 748 aa16.01■□□□□ 0.15
ATPAF2-207ENST00000488753 PDE4DIPQ5VU43 2346 aa16.01■□□□□ 0.15
ATPAF2-207ENST00000488753 DOCK2Q92608 1830 aa16.01■□□□□ 0.15
ATPAF2-207ENST00000488753 CYP2E1P05181 493 aaPredicted RBP16■□□□□ 0.15
ATPAF2-207ENST00000488753 SLC9C1Q4G0N8 1177 aa16■□□□□ 0.15
ATPAF2-207ENST00000488753 HSP90AB4PQ58FF6 505 aa16■□□□□ 0.15
ATPAF2-207ENST00000488753 GPAT2Q6NUI2 795 aa16■□□□□ 0.15
ATPAF2-207ENST00000488753 TMED8Q6PL24 325 aaPredicted RBP16■□□□□ 0.15
ATPAF2-207ENST00000488753 ZNF333Q96JL9 665 aa16■□□□□ 0.15
ATPAF2-207ENST00000488753 TBC1D2Q9BYX2 928 aa16■□□□□ 0.15
ATPAF2-207ENST00000488753 DHX36Q9H2U1 1008 aaKnown RBP16■□□□□ 0.15
ATPAF2-207ENST00000488753 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16■□□□□ 0.15
ATPAF2-207ENST00000488753 SNRKQ9NRH2 765 aa16■□□□□ 0.15
ATPAF2-207ENST00000488753 CPA4Q9UI42 421 aa16■□□□□ 0.15
ATPAF2-207ENST00000488753 HERC5Q9UII4 1024 aaKnown RBP16■□□□□ 0.15
ATPAF2-207ENST00000488753 PTCH2Q9Y6C5 1203 aa16■□□□□ 0.15
ATPAF2-207ENST00000488753 BRCA2P51587 3418 aa16■□□□□ 0.15
ATPAF2-207ENST00000488753 AK9Q5TCS8 1911 aa16■□□□□ 0.15
ATPAF2-207ENST00000488753 HOXD10P28358 340 aa15.99■□□□□ 0.15
ATPAF2-207ENST00000488753 PRPF38BQ5VTL8 546 aaKnown RBP15.99■□□□□ 0.15
ATPAF2-207ENST00000488753 PANK1Q8TE04 598 aa15.99■□□□□ 0.15
ATPAF2-207ENST00000488753 SH3RF3Q8TEJ3 882 aaPredicted RBP15.99■□□□□ 0.15
ATPAF2-207ENST00000488753 EAF2Q96CJ1 260 aaPredicted RBP15.99■□□□□ 0.15
ATPAF2-207ENST00000488753 ARHGAP39Q9C0H5 1083 aa15.99■□□□□ 0.15
ATPAF2-207ENST00000488753 PI4KBQ9UBF8 816 aa15.99■□□□□ 0.15
ATPAF2-207ENST00000488753 POTEFA5A3E0 1075 aa15.98■□□□□ 0.15
ATPAF2-207ENST00000488753 ZAP70P43403 619 aa15.98■□□□□ 0.15
ATPAF2-207ENST00000488753 CERS3Q8IU89 383 aa15.98■□□□□ 0.15
ATPAF2-207ENST00000488753 TMEM106CQ9BVX2 250 aa15.98■□□□□ 0.15
ATPAF2-207ENST00000488753 AATFQ9NY61 560 aaKnown RBP eCLIP15.98■□□□□ 0.15
ATPAF2-207ENST00000488753 TRIM75PA6NK02 468 aa15.97■□□□□ 0.15
ATPAF2-207ENST00000488753 SLURP2P0DP57 97 aa15.97■□□□□ 0.15
ATPAF2-207ENST00000488753 BCRP11274 1271 aa15.97■□□□□ 0.15
ATPAF2-207ENST00000488753 PSMC4P43686 418 aa15.97■□□□□ 0.15
ATPAF2-207ENST00000488753 CCDC8Q9H0W5 538 aaPredicted RBP15.97■□□□□ 0.15
ATPAF2-207ENST00000488753 TLR7Q9NYK1 1049 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms