RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 C2CD4AQ8NCU7 369 aaPredicted RBP7.24□□□□□ -1.25
ITGB1-214ENST00000488427 ELMO3Q96BJ8 720 aa7.24□□□□□ -1.25
ITGB1-214ENST00000488427 RSRP1Q9BUV0 290 aa7.24□□□□□ -1.25
ITGB1-214ENST00000488427 RNF19AQ9NV58 838 aa7.24□□□□□ -1.25
ITGB1-214ENST00000488427 FAM95CA0A1B0GW59 222 aa7.23□□□□□ -1.25
ITGB1-214ENST00000488427 PAX4O43316 350 aa7.23□□□□□ -1.25
ITGB1-214ENST00000488427 PAGE1O75459 146 aa7.23□□□□□ -1.25
ITGB1-214ENST00000488427 BPNT1O95861 308 aa7.23□□□□□ -1.25
ITGB1-214ENST00000488427 KCT2Q8NC54 265 aa7.23□□□□□ -1.25
ITGB1-214ENST00000488427 GPBAR1Q8TDU6 330 aa7.23□□□□□ -1.25
ITGB1-214ENST00000488427 FAM83CQ9BQN1 747 aa7.23□□□□□ -1.25
ITGB1-214ENST00000488427 PCDHA4Q9UN74 947 aa7.23□□□□□ -1.25
ITGB1-214ENST00000488427 ECEL1O95672 775 aa7.22□□□□□ -1.25
ITGB1-214ENST00000488427 CTSBP07858 339 aa7.22□□□□□ -1.25
ITGB1-214ENST00000488427 SSTR4P31391 388 aa7.22□□□□□ -1.25
ITGB1-214ENST00000488427 ZNF76P36508 570 aa7.22□□□□□ -1.25
ITGB1-214ENST00000488427 MAP3K11Q16584 847 aa7.22□□□□□ -1.25
ITGB1-214ENST00000488427 CRIM1Q9NZV1 1036 aa7.22□□□□□ -1.25
ITGB1-214ENST00000488427 ACTL7BQ9Y614 415 aa7.22□□□□□ -1.25
ITGB1-214ENST00000488427 TACC3Q9Y6A5 838 aa7.22□□□□□ -1.25
ITGB1-214ENST00000488427 SNCAIPQ9Y6H5 919 aa7.22□□□□□ -1.25
ITGB1-214ENST00000488427 SCAMP3O14828 347 aaKnown RBP7.21□□□□□ -1.26
ITGB1-214ENST00000488427 TMPRSS2O15393 492 aa7.21□□□□□ -1.26
ITGB1-214ENST00000488427 ZNF862O60290 1169 aa7.21□□□□□ -1.26
ITGB1-214ENST00000488427 DRD2P14416 443 aa7.21□□□□□ -1.26
ITGB1-214ENST00000488427 RAB6AP20340 208 aa7.21□□□□□ -1.26
ITGB1-214ENST00000488427 GBP2P32456 591 aaPredicted RBP7.21□□□□□ -1.26
ITGB1-214ENST00000488427 CPSF6Q16630 551 aaKnown RBP eCLIP7.21□□□□□ -1.26
ITGB1-214ENST00000488427 TSNAXIP1Q2TAA8 658 aa7.21□□□□□ -1.26
ITGB1-214ENST00000488427 CDC37L1Q7L3B6 337 aa7.21□□□□□ -1.26
ITGB1-214ENST00000488427 ARMC10Q8N2F6 343 aa7.21□□□□□ -1.26
ITGB1-214ENST00000488427 STK35Q8TDR2 534 aa7.21□□□□□ -1.26
ITGB1-214ENST00000488427 MRRFQ96E11 262 aaKnown RBP7.21□□□□□ -1.26
ITGB1-214ENST00000488427 TMEM74Q96NL1 305 aa7.21□□□□□ -1.26
ITGB1-214ENST00000488427 SSU72Q9NP77 194 aaKnown RBP7.21□□□□□ -1.26
ITGB1-214ENST00000488427 CACNA2D2Q9NY47 1150 aa7.21□□□□□ -1.26
ITGB1-214ENST00000488427 GGT7Q9UJ14 662 aa7.21□□□□□ -1.26
ITGB1-214ENST00000488427 COL17A1Q9UMD9 1497 aaPredicted RBP7.2□□□□□ -1.26
ITGB1-214ENST00000488427 FANCGO15287 622 aa7.2□□□□□ -1.26
ITGB1-214ENST00000488427 CYP27A1Q02318 531 aa7.2□□□□□ -1.26
ITGB1-214ENST00000488427 LMNB2Q03252 620 aa7.2□□□□□ -1.26
ITGB1-214ENST00000488427 ZC3H12AQ5D1E8 599 aaKnown RBP7.2□□□□□ -1.26
ITGB1-214ENST00000488427 TRIM42Q8IWZ5 723 aa7.2□□□□□ -1.26
ITGB1-214ENST00000488427 RNF214Q8ND24 703 aa7.2□□□□□ -1.26
ITGB1-214ENST00000488427 EZH1Q92800 747 aaPredicted RBP7.2□□□□□ -1.26
ITGB1-214ENST00000488427 DBNDD2Q9BQY9 259 aa7.2□□□□□ -1.26
ITGB1-214ENST00000488427 METTL22Q9BUU2 404 aaPredicted RBP7.2□□□□□ -1.26
ITGB1-214ENST00000488427 GSX1Q9H4S2 264 aaPredicted RBP7.2□□□□□ -1.26
ITGB1-214ENST00000488427 RNGTTO60942 597 aaKnown RBP7.19□□□□□ -1.26
ITGB1-214ENST00000488427 CD97P48960 835 aa7.19□□□□□ -1.26
ITGB1-214ENST00000488427 PDE4BQ07343 736 aa7.19□□□□□ -1.26
ITGB1-214ENST00000488427 NFKBIBQ15653 356 aa7.19□□□□□ -1.26
ITGB1-214ENST00000488427 SGO2Q562F6 1265 aa7.19□□□□□ -1.26
ITGB1-214ENST00000488427 SNAP47Q5SQN1 464 aa7.19□□□□□ -1.26
ITGB1-214ENST00000488427 RNF43Q68DV7 783 aa7.19□□□□□ -1.26
ITGB1-214ENST00000488427 SMYD4Q8IYR2 804 aaPredicted RBP7.19□□□□□ -1.26
ITGB1-214ENST00000488427 PHC3Q8NDX5 983 aa7.19□□□□□ -1.26
ITGB1-214ENST00000488427 GRIN3AQ8TCU5 1115 aa7.19□□□□□ -1.26
ITGB1-214ENST00000488427 RNF34Q969K3 372 aa7.19□□□□□ -1.26
ITGB1-214ENST00000488427 FANCD2OSQ96PS1 177 aa7.19□□□□□ -1.26
ITGB1-214ENST00000488427 KRTAP9-9Q9BYP9 154 aa7.19□□□□□ -1.26
ITGB1-214ENST00000488427 KRTAP9-4Q9BYQ2 154 aa7.19□□□□□ -1.26
ITGB1-214ENST00000488427 BACH2Q9BYV9 841 aa7.19□□□□□ -1.26
ITGB1-214ENST00000488427 ACSS3Q9H6R3 686 aa7.19□□□□□ -1.26
ITGB1-214ENST00000488427 C7orf69Q9H7B7 122 aa7.19□□□□□ -1.26
ITGB1-214ENST00000488427 PCOLCE2Q9UKZ9 415 aa7.19□□□□□ -1.26
ITGB1-214ENST00000488427 PPP1R9AQ9ULJ8 1098 aa7.19□□□□□ -1.26
ITGB1-214ENST00000488427 IGLV1-40P01703 118 aa7.18□□□□□ -1.26
ITGB1-214ENST00000488427 TXKP42681 527 aa7.18□□□□□ -1.26
ITGB1-214ENST00000488427 IRAK1P51617 712 aa7.18□□□□□ -1.26
ITGB1-214ENST00000488427 ERMP1Q7Z2K6 904 aa7.18□□□□□ -1.26
ITGB1-214ENST00000488427 FBLIM1Q8WUP2 373 aa7.18□□□□□ -1.26
ITGB1-214ENST00000488427 WDR89Q96FK6 387 aaPredicted RBP7.18□□□□□ -1.26
ITGB1-214ENST00000488427 ATG3Q9NT62 314 aa7.18□□□□□ -1.26
ITGB1-214ENST00000488427 FAM105AQ9NUU6 356 aa7.18□□□□□ -1.26
ITGB1-214ENST00000488427 DAGLAQ9Y4D2 1042 aa7.18□□□□□ -1.26
ITGB1-214ENST00000488427 PCDHGC5Q9Y5F6 944 aa7.18□□□□□ -1.26
ITGB1-214ENST00000488427 ROBO2Q9HCK4 1378 aa7.18□□□□□ -1.26
ITGB1-214ENST00000488427 RPL6Q02878 288 aaKnown RBP7.17□□□□□ -1.26
ITGB1-214ENST00000488427 NFIAQ12857 509 aa7.17□□□□□ -1.26
ITGB1-214ENST00000488427 MLECQ14165 292 aa7.17□□□□□ -1.26
ITGB1-214ENST00000488427 ZNF507Q8TCN5 953 aa7.17□□□□□ -1.26
ITGB1-214ENST00000488427 DISC1Q9NRI5 854 aa7.17□□□□□ -1.26
ITGB1-214ENST00000488427 SUPT16HQ9Y5B9 1047 aaKnown RBP7.17□□□□□ -1.26
ITGB1-214ENST00000488427 GRIK1P39086 918 aa7.16□□□□□ -1.26
ITGB1-214ENST00000488427 CAMK2GQ13555 558 aaPredicted RBP7.16□□□□□ -1.26
ITGB1-214ENST00000488427 TTLL4Q14679 1199 aa7.16□□□□□ -1.26
ITGB1-214ENST00000488427 WIPI1Q5MNZ9 446 aaPredicted RBP7.16□□□□□ -1.26
ITGB1-214ENST00000488427 DUSP27Q5VZP5 1158 aa7.16□□□□□ -1.26
ITGB1-214ENST00000488427 CDPF1Q6NVV7 123 aa7.16□□□□□ -1.26
ITGB1-214ENST00000488427 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.16□□□□□ -1.26
ITGB1-214ENST00000488427 GAL3ST3Q96A11 431 aa7.16□□□□□ -1.26
ITGB1-214ENST00000488427 SEMA6CQ9H3T2 930 aa7.16□□□□□ -1.26
ITGB1-214ENST00000488427 HMX2A2RU54 273 aa7.15□□□□□ -1.26
ITGB1-214ENST00000488427 DCDC2CA8MYV0 355 aa7.15□□□□□ -1.26
ITGB1-214ENST00000488427 COBLO75128 1261 aa7.15□□□□□ -1.26
ITGB1-214ENST00000488427 NFICP08651 508 aa7.15□□□□□ -1.26
ITGB1-214ENST00000488427 TFE3P19532 575 aaPredicted RBP7.15□□□□□ -1.26
ITGB1-214ENST00000488427 EIF4A3P38919 411 aaKnown RBP7.15□□□□□ -1.26
ITGB1-214ENST00000488427 ETF1P62495 437 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms