RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 ARMC5Q96C12 935 aa10.65□□□□□ -0.7
PRKCB-208ENST00000487674 CDCA7LQ96GN5 454 aa10.65□□□□□ -0.7
PRKCB-208ENST00000487674 ZFYVE28Q9HCC9 887 aa10.65□□□□□ -0.7
PRKCB-208ENST00000487674 ZCCHC17Q9NP64 241 aaKnown RBP10.65□□□□□ -0.7
PRKCB-208ENST00000487674 DOCK2Q92608 1830 aa10.65□□□□□ -0.71
PRKCB-208ENST00000487674 KIAA0100Q14667 2235 aaKnown RBP10.64□□□□□ -0.71
PRKCB-208ENST00000487674 CETPP11597 493 aa10.64□□□□□ -0.71
PRKCB-208ENST00000487674 PPIL2Q13356 520 aa10.64□□□□□ -0.71
PRKCB-208ENST00000487674 SNAPC2Q13487 334 aa10.64□□□□□ -0.71
PRKCB-208ENST00000487674 ARHGEF6Q15052 776 aa10.64□□□□□ -0.71
PRKCB-208ENST00000487674 ATP2B3Q16720 1220 aa10.64□□□□□ -0.71
PRKCB-208ENST00000487674 TRMT2AQ8IZ69 625 aaKnown RBP10.64□□□□□ -0.71
PRKCB-208ENST00000487674 EFCAB3Q8N7B9 438 aa10.64□□□□□ -0.71
PRKCB-208ENST00000487674 ZNF341Q9BYN7 854 aa10.64□□□□□ -0.71
PRKCB-208ENST00000487674 SIL1Q9H173 461 aa10.64□□□□□ -0.71
PRKCB-208ENST00000487674 GNL3LQ9NVN8 582 aaKnown RBP10.64□□□□□ -0.71
PRKCB-208ENST00000487674 HDAC5Q9UQL6 1122 aa10.64□□□□□ -0.71
PRKCB-208ENST00000487674 DAGLAQ9Y4D2 1042 aa10.64□□□□□ -0.71
PRKCB-208ENST00000487674 SALL1Q9NSC2 1324 aa10.63□□□□□ -0.71
PRKCB-208ENST00000487674 IRF6O14896 467 aa10.63□□□□□ -0.71
PRKCB-208ENST00000487674 SEMA3EO15041 775 aa10.63□□□□□ -0.71
PRKCB-208ENST00000487674 PRDX5P30044 214 aa10.63□□□□□ -0.71
PRKCB-208ENST00000487674 IL15P40933 162 aaPredicted RBP10.63□□□□□ -0.71
PRKCB-208ENST00000487674 CAP1Q01518 475 aa10.63□□□□□ -0.71
PRKCB-208ENST00000487674 DIXDC1Q155Q3 683 aa10.63□□□□□ -0.71
PRKCB-208ENST00000487674 FAM151AQ8WW52 585 aa10.63□□□□□ -0.71
PRKCB-208ENST00000487674 ZKSCAN4Q969J2 545 aaPredicted RBP10.63□□□□□ -0.71
PRKCB-208ENST00000487674 API5Q9BZZ5 524 aaKnown RBP10.63□□□□□ -0.71
PRKCB-208ENST00000487674 CEP126Q9P2H0 1117 aa10.63□□□□□ -0.71
PRKCB-208ENST00000487674 LRRFIP2Q9Y608 721 aaKnown RBP10.63□□□□□ -0.71
PRKCB-208ENST00000487674 ZSWIM8A7E2V4 1837 aa10.63□□□□□ -0.71
PRKCB-208ENST00000487674 AK9Q5TCS8 1911 aa10.62□□□□□ -0.71
PRKCB-208ENST00000487674 MYH2Q9UKX2 1941 aa10.62□□□□□ -0.71
PRKCB-208ENST00000487674 TLR2O60603 784 aa10.62□□□□□ -0.71
PRKCB-208ENST00000487674 LDHBP07195 334 aaKnown RBP10.62□□□□□ -0.71
PRKCB-208ENST00000487674 PPATQ06203 517 aa10.62□□□□□ -0.71
PRKCB-208ENST00000487674 CDC42EP5Q6NZY7 148 aa10.62□□□□□ -0.71
PRKCB-208ENST00000487674 DENND2AQ9ULE3 1009 aa10.62□□□□□ -0.71
PRKCB-208ENST00000487674 NOB1Q9ULX3 412 aaKnown RBP10.62□□□□□ -0.71
PRKCB-208ENST00000487674 RFX7Q2KHR2 1363 aa10.62□□□□□ -0.71
PRKCB-208ENST00000487674 BTBD19C9JJ37 291 aa10.61□□□□□ -0.71
PRKCB-208ENST00000487674 INPP5BP32019 993 aa10.61□□□□□ -0.71
PRKCB-208ENST00000487674 PHKA1P46020 1223 aa10.61□□□□□ -0.71
PRKCB-208ENST00000487674 TCP10Q12799 353 aa10.61□□□□□ -0.71
PRKCB-208ENST00000487674 NFIAQ12857 509 aa10.61□□□□□ -0.71
PRKCB-208ENST00000487674 SLC9C1Q4G0N8 1177 aa10.61□□□□□ -0.71
PRKCB-208ENST00000487674 NOL9Q5SY16 702 aaKnown RBP10.61□□□□□ -0.71
PRKCB-208ENST00000487674 MIGA2Q7L4E1 593 aa10.61□□□□□ -0.71
PRKCB-208ENST00000487674 ZGPATQ8N5A5 531 aaKnown RBP10.61□□□□□ -0.71
PRKCB-208ENST00000487674 ZNF333Q96JL9 665 aa10.61□□□□□ -0.71
PRKCB-208ENST00000487674 MEIS3Q99687 375 aa10.61□□□□□ -0.71
PRKCB-208ENST00000487674 COPRSQ9NQ92 184 aa10.61□□□□□ -0.71
PRKCB-208ENST00000487674 ZNF112Q9UJU3 913 aa10.61□□□□□ -0.71
PRKCB-208ENST00000487674 PTCH2Q9Y6C5 1203 aa10.61□□□□□ -0.71
PRKCB-208ENST00000487674 PDS5AQ29RF7 1337 aaKnown RBP10.6□□□□□ -0.71
PRKCB-208ENST00000487674 GNRH1P01148 92 aa10.6□□□□□ -0.71
PRKCB-208ENST00000487674 LACTBP83111 547 aaPredicted RBP10.6□□□□□ -0.71
PRKCB-208ENST00000487674 KIF22Q14807 665 aa10.6□□□□□ -0.71
PRKCB-208ENST00000487674 CCDC102BQ68D86 513 aa10.6□□□□□ -0.71
PRKCB-208ENST00000487674 NBPF11Q86T75 865 aa10.6□□□□□ -0.71
PRKCB-208ENST00000487674 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.6□□□□□ -0.71
PRKCB-208ENST00000487674 FAM198AQ9UFP1 575 aa10.6□□□□□ -0.71
PRKCB-208ENST00000487674 KCNH4Q9UQ05 1017 aa10.6□□□□□ -0.71
PRKCB-208ENST00000487674 PA2G4Q9UQ80 394 aaKnown RBP10.6□□□□□ -0.71
PRKCB-208ENST00000487674 ATRNL1Q5VV63 1379 aa10.6□□□□□ -0.71
PRKCB-208ENST00000487674 GAKO14976 1311 aa10.59□□□□□ -0.71
PRKCB-208ENST00000487674 DOCK1Q14185 1865 aa10.59□□□□□ -0.71
PRKCB-208ENST00000487674 ADORA1P30542 326 aa10.59□□□□□ -0.71
PRKCB-208ENST00000487674 RARSP54136 660 aaKnown RBP10.59□□□□□ -0.71
PRKCB-208ENST00000487674 RASGRF1Q13972 1273 aa10.59□□□□□ -0.71
PRKCB-208ENST00000487674 ANKRD23Q86SG2 305 aa10.59□□□□□ -0.71
PRKCB-208ENST00000487674 DZIP1Q86YF9 867 aaKnown RBP10.59□□□□□ -0.71
PRKCB-208ENST00000487674 ARHGAP45Q92619 1136 aa10.59□□□□□ -0.71
PRKCB-208ENST00000487674 GCC1Q96CN9 775 aa10.59□□□□□ -0.71
PRKCB-208ENST00000487674 USP40Q9NVE5 1235 aa10.59□□□□□ -0.71
PRKCB-208ENST00000487674 ADGRA2Q96PE1 1338 aa10.58□□□□□ -0.71
PRKCB-208ENST00000487674 PTPRFP10586 1907 aa10.58□□□□□ -0.72
PRKCB-208ENST00000487674 CENPFP49454 3210 aa10.58□□□□□ -0.72
PRKCB-208ENST00000487674 CCER2I3L3R5 266 aa10.58□□□□□ -0.72
PRKCB-208ENST00000487674 PDHXO00330 501 aa10.58□□□□□ -0.72
PRKCB-208ENST00000487674 ENTPD3O75355 529 aa10.58□□□□□ -0.72
PRKCB-208ENST00000487674 GNAI3P08754 354 aa10.58□□□□□ -0.72
PRKCB-208ENST00000487674 HOXB1P14653 301 aaPredicted RBP10.58□□□□□ -0.72
PRKCB-208ENST00000487674 EN2P19622 333 aaPredicted RBP10.58□□□□□ -0.72
PRKCB-208ENST00000487674 PRMT2P55345 433 aa10.58□□□□□ -0.72
PRKCB-208ENST00000487674 MTX1Q13505 466 aa10.58□□□□□ -0.72
PRKCB-208ENST00000487674 MVPQ14764 893 aaKnown RBP10.58□□□□□ -0.72
PRKCB-208ENST00000487674 SLF2Q8IX21 1173 aa10.58□□□□□ -0.72
PRKCB-208ENST00000487674 ZNF710Q8N1W2 664 aa10.58□□□□□ -0.72
PRKCB-208ENST00000487674 IDI2Q9BXS1 227 aa10.58□□□□□ -0.72
PRKCB-208ENST00000487674 ARHGAP39Q9C0H5 1083 aa10.58□□□□□ -0.72
PRKCB-208ENST00000487674 A0A1B0GUL7 405 aa10.57□□□□□ -0.72
PRKCB-208ENST00000487674 SRGAP3O43295 1099 aa10.57□□□□□ -0.72
PRKCB-208ENST00000487674 RGS3P49796 1198 aa10.57□□□□□ -0.72
PRKCB-208ENST00000487674 MOGSQ13724 837 aa10.57□□□□□ -0.72
PRKCB-208ENST00000487674 SPTY2D1Q68D10 685 aaPredicted RBP10.57□□□□□ -0.72
PRKCB-208ENST00000487674 C17orf99Q6UX52 265 aa10.57□□□□□ -0.72
PRKCB-208ENST00000487674 PARK7Q99497 189 aaKnown RBP10.57□□□□□ -0.72
PRKCB-208ENST00000487674 ABCF2Q9UG63 623 aa10.57□□□□□ -0.72
PRKCB-208ENST00000487674 CPA4Q9UI42 421 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms