RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 DDTLA6NHG4 134 aaPredicted RBP23.25■■□□□ 1.31
GMDS-205ENST00000486793 PTPRAP18433 802 aa23.25■■□□□ 1.31
GMDS-205ENST00000486793 MAP3K10Q02779 954 aa23.25■■□□□ 1.31
GMDS-205ENST00000486793 MTFR1Q15390 333 aa23.25■■□□□ 1.31
GMDS-205ENST00000486793 SLF2Q8IX21 1173 aa23.25■■□□□ 1.31
GMDS-205ENST00000486793 ARHGAP45Q92619 1136 aa23.25■■□□□ 1.31
GMDS-205ENST00000486793 PARK7Q99497 189 aaKnown RBP23.25■■□□□ 1.31
GMDS-205ENST00000486793 GNAI3P08754 354 aa23.24■■□□□ 1.31
GMDS-205ENST00000486793 SPTY2D1Q68D10 685 aaPredicted RBP23.24■■□□□ 1.31
GMDS-205ENST00000486793 RAET1EQ8TD07 263 aa23.24■■□□□ 1.31
GMDS-205ENST00000486793 DDX4Q9NQI0 724 aaKnown RBP23.24■■□□□ 1.31
GMDS-205ENST00000486793 AKAP2Q9Y2D5 859 aa23.24■■□□□ 1.31
GMDS-205ENST00000486793 AFG3L2Q9Y4W6 797 aa23.24■■□□□ 1.31
GMDS-205ENST00000486793 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.24■■□□□ 1.31
GMDS-205ENST00000486793 BCRP11274 1271 aa23.23■■□□□ 1.31
GMDS-205ENST00000486793 BTDP43251 543 aa23.23■■□□□ 1.31
GMDS-205ENST00000486793 PICALMQ13492 652 aa23.23■■□□□ 1.31
GMDS-205ENST00000486793 FASTKD5Q7L8L6 764 aaKnown RBP23.23■■□□□ 1.31
GMDS-205ENST00000486793 NEUROD6Q96NK8 337 aa23.23■■□□□ 1.31
GMDS-205ENST00000486793 PDS5AQ29RF7 1337 aaKnown RBP23.23■■□□□ 1.31
GMDS-205ENST00000486793 A0A0G2JLL6 359 aaPredicted RBP23.22■■□□□ 1.31
GMDS-205ENST00000486793 GRK4P32298 578 aa23.22■■□□□ 1.31
GMDS-205ENST00000486793 MECOMQ03112 1051 aa23.22■■□□□ 1.31
GMDS-205ENST00000486793 MTX1Q13505 466 aa23.22■■□□□ 1.31
GMDS-205ENST00000486793 MVPQ14764 893 aaKnown RBP23.22■■□□□ 1.31
GMDS-205ENST00000486793 PRRT2Q7Z6L0 340 aaPredicted RBP23.22■■□□□ 1.31
GMDS-205ENST00000486793 MYPNQ86TC9 1320 aa23.22■■□□□ 1.31
GMDS-205ENST00000486793 GPR75-ASB3A0A0A6YYF3 556 aa23.21■■□□□ 1.31
GMDS-205ENST00000486793 CTNND1O60716 968 aaKnown RBP23.21■■□□□ 1.31
GMDS-205ENST00000486793 ERICH6Q7L0X2 663 aa23.21■■□□□ 1.31
GMDS-205ENST00000486793 ZNF384Q8TF68 577 aa23.21■■□□□ 1.31
GMDS-205ENST00000486793 MROH7-TTC4A0A0A0MT08 1334 aa23.21■■□□□ 1.31
GMDS-205ENST00000486793 RFX7Q2KHR2 1363 aa23.21■■□□□ 1.31
GMDS-205ENST00000486793 FCGRTP55899 365 aa23.2■■□□□ 1.3
GMDS-205ENST00000486793 RHBDL3P58872 404 aa23.2■■□□□ 1.3
GMDS-205ENST00000486793 PRKCZQ05513 592 aa23.2■■□□□ 1.3
GMDS-205ENST00000486793 GADL1Q6ZQY3 521 aa23.2■■□□□ 1.3
GMDS-205ENST00000486793 HMG20BQ9P0W2 317 aa23.2■■□□□ 1.3
GMDS-205ENST00000486793 BIN2Q9UBW5 565 aaPredicted RBP23.2■■□□□ 1.3
GMDS-205ENST00000486793 COLQQ9Y215 455 aaPredicted RBP23.2■■□□□ 1.3
GMDS-205ENST00000486793 H0YGN5 161 aa23.19■■□□□ 1.3
GMDS-205ENST00000486793 TBC1D9Q6ZT07 1266 aa23.19■■□□□ 1.3
GMDS-205ENST00000486793 SHISA4Q96DD7 197 aa23.19■■□□□ 1.3
GMDS-205ENST00000486793 TRIM75PA6NK02 468 aa23.18■■□□□ 1.3
GMDS-205ENST00000486793 CCL5P13501 91 aa23.18■■□□□ 1.3
GMDS-205ENST00000486793 GORABQ5T7V8 394 aa23.18■■□□□ 1.3
GMDS-205ENST00000486793 PI16Q6UXB8 463 aa23.18■■□□□ 1.3
GMDS-205ENST00000486793 CCDC84Q86UT8 332 aaPredicted RBP23.18■■□□□ 1.3
GMDS-205ENST00000486793 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.18■■□□□ 1.3
GMDS-205ENST00000486793 GABRQQ9UN88 632 aa23.18■■□□□ 1.3
GMDS-205ENST00000486793 RBBP6Q7Z6E9 1792 aaKnown RBP23.17■■□□□ 1.3
GMDS-205ENST00000486793 GJB1P08034 283 aa23.17■■□□□ 1.3
GMDS-205ENST00000486793 SPATA5Q8NB90 893 aa23.17■■□□□ 1.3
GMDS-205ENST00000486793 NSUN4Q96CB9 384 aaKnown RBP23.17■■□□□ 1.3
GMDS-205ENST00000486793 RNF208Q9H0X6 261 aa23.17■■□□□ 1.3
GMDS-205ENST00000486793 TNNQ9UQP3 1299 aa23.17■■□□□ 1.3
GMDS-205ENST00000486793 SLC45A1Q9Y2W3 748 aa23.17■■□□□ 1.3
GMDS-205ENST00000486793 ZSWIM8A7E2V4 1837 aa23.17■■□□□ 1.3
GMDS-205ENST00000486793 IPO8O15397 1037 aaKnown RBP23.16■■□□□ 1.3
GMDS-205ENST00000486793 TBC1D12O60347 775 aa23.16■■□□□ 1.3
GMDS-205ENST00000486793 NPM3O75607 178 aaKnown RBP23.16■■□□□ 1.3
GMDS-205ENST00000486793 GNAI2P04899 355 aa23.16■■□□□ 1.3
GMDS-205ENST00000486793 GJA8P48165 433 aa23.16■■□□□ 1.3
GMDS-205ENST00000486793 NKX2-3Q8TAU0 364 aa23.16■■□□□ 1.3
GMDS-205ENST00000486793 FAM196BA6NMK8 535 aa23.15■■□□□ 1.3
GMDS-205ENST00000486793 LDHCP07864 332 aa23.15■■□□□ 1.3
GMDS-205ENST00000486793 TRIM27P14373 513 aa23.15■■□□□ 1.3
GMDS-205ENST00000486793 FXR1P51114 621 aaKnown RBP eCLIP23.15■■□□□ 1.3
GMDS-205ENST00000486793 UBXN2AP68543 259 aa23.15■■□□□ 1.3
GMDS-205ENST00000486793 GSTO1P78417 241 aa23.15■■□□□ 1.3
GMDS-205ENST00000486793 SMCR8Q8TEV9 937 aaPredicted RBP23.15■■□□□ 1.3
GMDS-205ENST00000486793 DPF3Q92784 378 aa23.15■■□□□ 1.3
GMDS-205ENST00000486793 FRAT1Q92837 279 aaPredicted RBP23.15■■□□□ 1.3
GMDS-205ENST00000486793 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.15■■□□□ 1.3
GMDS-205ENST00000486793 RAI14Q9P0K7 980 aa23.15■■□□□ 1.3
GMDS-205ENST00000486793 PNMA6EA0A0J9YXQ4 647 aa23.14■■□□□ 1.29
GMDS-205ENST00000486793 BCAR3O75815 825 aa23.14■■□□□ 1.29
GMDS-205ENST00000486793 FLT3LGP49771 235 aa23.14■■□□□ 1.29
GMDS-205ENST00000486793 G3BP1Q13283 466 aaKnown RBP eCLIP23.14■■□□□ 1.29
GMDS-205ENST00000486793 SLAIN1Q8ND83 568 aa23.14■■□□□ 1.29
GMDS-205ENST00000486793 CEP290O15078 2479 aa23.14■■□□□ 1.29
GMDS-205ENST00000486793 CCER2I3L3R5 266 aa23.13■■□□□ 1.29
GMDS-205ENST00000486793 ADCY3O60266 1144 aa23.13■■□□□ 1.29
GMDS-205ENST00000486793 MAP4K4O95819 1239 aaPredicted RBP23.13■■□□□ 1.29
GMDS-205ENST00000486793 ATF7IPQ6VMQ6 1270 aa23.13■■□□□ 1.29
GMDS-205ENST00000486793 UBE2Q1Q7Z7E8 422 aa23.13■■□□□ 1.29
GMDS-205ENST00000486793 CLUAP1Q96AJ1 413 aa23.13■■□□□ 1.29
GMDS-205ENST00000486793 AGTPBP1Q9UPW5 1226 aa23.13■■□□□ 1.29
GMDS-205ENST00000486793 ARID4AP29374 1257 aaPredicted RBP23.12■■□□□ 1.29
GMDS-205ENST00000486793 TREML2Q5T2D2 321 aa23.12■■□□□ 1.29
GMDS-205ENST00000486793 UNC93B1Q9H1C4 597 aa23.12■■□□□ 1.29
GMDS-205ENST00000486793 TNPO2O14787 897 aaKnown RBP23.11■■□□□ 1.29
GMDS-205ENST00000486793 ELNP15502 786 aa23.11■■□□□ 1.29
GMDS-205ENST00000486793 MCAMP43121 646 aa23.11■■□□□ 1.29
GMDS-205ENST00000486793 SPP2Q13103 211 aa23.11■■□□□ 1.29
GMDS-205ENST00000486793 U2AF1L4Q8WU68 220 aaKnown RBP23.11■■□□□ 1.29
GMDS-205ENST00000486793 OSBPL5Q9H0X9 879 aaPredicted RBP23.11■■□□□ 1.29
GMDS-205ENST00000486793 LRP2BPQ9P2M1 347 aa23.11■■□□□ 1.29
GMDS-205ENST00000486793 UQCRFS1P1P0C7P4 283 aa23.1■■□□□ 1.29
GMDS-205ENST00000486793 RRP1BQ14684 758 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms