RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 GCKRQ14397 625 aa12.37□□□□□ -0.43
PTPN7-213ENST00000486116 FAM110CQ1W6H9 321 aa12.37□□□□□ -0.43
PTPN7-213ENST00000486116 CCDC146Q8IYE0 955 aa12.37□□□□□ -0.43
PTPN7-213ENST00000486116 FAM151AQ8WW52 585 aa12.37□□□□□ -0.43
PTPN7-213ENST00000486116 ATRNL1Q5VV63 1379 aa12.36□□□□□ -0.43
PTPN7-213ENST00000486116 ZNF853P0CG23 659 aa12.36□□□□□ -0.43
PTPN7-213ENST00000486116 LHX8Q68G74 356 aa12.36□□□□□ -0.43
PTPN7-213ENST00000486116 IQSEC3Q9UPP2 1182 aaPredicted RBP12.36□□□□□ -0.43
PTPN7-213ENST00000486116 AFG3L2Q9Y4W6 797 aa12.36□□□□□ -0.43
PTPN7-213ENST00000486116 ZHX2Q9Y6X8 837 aa12.36□□□□□ -0.43
PTPN7-213ENST00000486116 PTPRAP18433 802 aa12.35□□□□□ -0.43
PTPN7-213ENST00000486116 FOXO4P98177 505 aa12.35□□□□□ -0.43
PTPN7-213ENST00000486116 IFIT5Q13325 482 aaKnown RBP12.35□□□□□ -0.43
PTPN7-213ENST00000486116 TREML2Q5T2D2 321 aa12.35□□□□□ -0.43
PTPN7-213ENST00000486116 C8orf58Q8NAV2 365 aa12.35□□□□□ -0.43
PTPN7-213ENST00000486116 ADAMTS19Q8TE59 1207 aa12.35□□□□□ -0.43
PTPN7-213ENST00000486116 ZNF594Q96JF6 807 aaPredicted RBP12.35□□□□□ -0.43
PTPN7-213ENST00000486116 PHF20L1A8MW92 1017 aa12.34□□□□□ -0.43
PTPN7-213ENST00000486116 CCND3P30281 292 aaPredicted RBP12.34□□□□□ -0.43
PTPN7-213ENST00000486116 TCP10Q12799 353 aa12.34□□□□□ -0.43
PTPN7-213ENST00000486116 CHAF1AQ13111 956 aaPredicted RBP12.34□□□□□ -0.43
PTPN7-213ENST00000486116 SCYL3Q8IZE3 742 aa12.34□□□□□ -0.43
PTPN7-213ENST00000486116 MRIQ9BWK5 157 aa12.34□□□□□ -0.43
PTPN7-213ENST00000486116 AGTPBP1Q9UPW5 1226 aa12.34□□□□□ -0.43
PTPN7-213ENST00000486116 CACNA1FO60840 1977 aa12.33□□□□□ -0.44
PTPN7-213ENST00000486116 CYP2B6P20813 491 aa12.33□□□□□ -0.44
PTPN7-213ENST00000486116 CACNB2Q08289 660 aaPredicted RBP12.33□□□□□ -0.44
PTPN7-213ENST00000486116 NFIAQ12857 509 aa12.33□□□□□ -0.44
PTPN7-213ENST00000486116 TRIM26Q12899 539 aaPredicted RBP12.33□□□□□ -0.44
PTPN7-213ENST00000486116 UBE4AQ14139 1066 aa12.33□□□□□ -0.44
PTPN7-213ENST00000486116 GRIN2CQ14957 1233 aa12.33□□□□□ -0.44
PTPN7-213ENST00000486116 CCDC30Q5VVM6 783 aa12.33□□□□□ -0.44
PTPN7-213ENST00000486116 TBC1D22AQ8WUA7 517 aa12.33□□□□□ -0.44
PTPN7-213ENST00000486116 ATXN2LQ8WWM7 1075 aaKnown RBP12.33□□□□□ -0.44
PTPN7-213ENST00000486116 ASB2Q96Q27 587 aa12.33□□□□□ -0.44
PTPN7-213ENST00000486116 UHRF1Q96T88 793 aaPredicted RBP12.33□□□□□ -0.44
PTPN7-213ENST00000486116 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.33□□□□□ -0.44
PTPN7-213ENST00000486116 ARIH1Q9Y4X5 557 aaPredicted RBP12.33□□□□□ -0.44
PTPN7-213ENST00000486116 PLXNA1Q9UIW2 1896 aa12.32□□□□□ -0.44
PTPN7-213ENST00000486116 TRIM75PA6NK02 468 aa12.32□□□□□ -0.44
PTPN7-213ENST00000486116 ATN1P54259 1190 aaPredicted RBP12.32□□□□□ -0.44
PTPN7-213ENST00000486116 HHIPL2Q6UWX4 724 aa12.32□□□□□ -0.44
PTPN7-213ENST00000486116 LDHAL6AQ6ZMR3 332 aa12.32□□□□□ -0.44
PTPN7-213ENST00000486116 G2E3Q7L622 706 aa12.32□□□□□ -0.44
PTPN7-213ENST00000486116 SENP6Q9GZR1 1112 aaPredicted RBP12.32□□□□□ -0.44
PTPN7-213ENST00000486116 PICK1Q9NRD5 415 aa12.32□□□□□ -0.44
PTPN7-213ENST00000486116 CNNM1Q9NRU3 951 aa12.32□□□□□ -0.44
PTPN7-213ENST00000486116 FAM198AQ9UFP1 575 aa12.32□□□□□ -0.44
PTPN7-213ENST00000486116 CHMP3Q9Y3E7 222 aa12.32□□□□□ -0.44
PTPN7-213ENST00000486116 MUC6Q6W4X9 2439 aa12.31□□□□□ -0.44
PTPN7-213ENST00000486116 MYH2Q9UKX2 1941 aa12.31□□□□□ -0.44
PTPN7-213ENST00000486116 MYO9BQ13459 2157 aa12.31□□□□□ -0.44
PTPN7-213ENST00000486116 FBXO33Q7Z6M2 555 aa12.31□□□□□ -0.44
PTPN7-213ENST00000486116 CCDC84Q86UT8 332 aaPredicted RBP12.31□□□□□ -0.44
PTPN7-213ENST00000486116 ZFPM1Q8IX07 1006 aa12.31□□□□□ -0.44
PTPN7-213ENST00000486116 THEGQ9P2T0 379 aa12.31□□□□□ -0.44
PTPN7-213ENST00000486116 PRKAG2Q9UGJ0 569 aa12.31□□□□□ -0.44
PTPN7-213ENST00000486116 PNMA3Q9UL41 463 aa12.31□□□□□ -0.44
PTPN7-213ENST00000486116 MAST3O60307 1309 aa12.31□□□□□ -0.44
PTPN7-213ENST00000486116 SLURP2P0DP57 97 aa12.3□□□□□ -0.44
PTPN7-213ENST00000486116 GCLCP48506 637 aaPredicted RBP12.3□□□□□ -0.44
PTPN7-213ENST00000486116 RTP1P59025 263 aa12.3□□□□□ -0.44
PTPN7-213ENST00000486116 EPHA10Q5JZY3 1008 aa12.3□□□□□ -0.44
PTPN7-213ENST00000486116 CDC42EP5Q6NZY7 148 aa12.3□□□□□ -0.44
PTPN7-213ENST00000486116 TSPYL6Q8N831 410 aa12.3□□□□□ -0.44
PTPN7-213ENST00000486116 BADQ92934 168 aa12.3□□□□□ -0.44
PTPN7-213ENST00000486116 RUNDC1Q96C34 613 aa12.3□□□□□ -0.44
PTPN7-213ENST00000486116 SNX27Q96L92 541 aa12.3□□□□□ -0.44
PTPN7-213ENST00000486116 C1QTNF1Q9BXJ1 281 aa12.3□□□□□ -0.44
PTPN7-213ENST00000486116 MYH16Q9H6N6 1097 aa12.3□□□□□ -0.44
PTPN7-213ENST00000486116 IFT57Q9NWB7 429 aa12.3□□□□□ -0.44
PTPN7-213ENST00000486116 REV3LO60673 3130 aa12.3□□□□□ -0.44
PTPN7-213ENST00000486116 XRCC5P13010 732 aaKnown RBP12.29□□□□□ -0.44
PTPN7-213ENST00000486116 ZKSCAN1P17029 563 aaPredicted RBP12.29□□□□□ -0.44
PTPN7-213ENST00000486116 CCL14Q16627 93 aa12.29□□□□□ -0.44
PTPN7-213ENST00000486116 LMBR1LQ6UX01 489 aa12.29□□□□□ -0.44
PTPN7-213ENST00000486116 PPM1EQ8WY54 764 aa12.29□□□□□ -0.44
PTPN7-213ENST00000486116 NECAB3Q96P71 396 aaPredicted RBP12.29□□□□□ -0.44
PTPN7-213ENST00000486116 MORF4L1Q9UBU8 362 aa12.29□□□□□ -0.44
PTPN7-213ENST00000486116 HCN4Q9Y3Q4 1203 aa12.29□□□□□ -0.44
PTPN7-213ENST00000486116 DAGLAQ9Y4D2 1042 aa12.29□□□□□ -0.44
PTPN7-213ENST00000486116 GBF1Q92538 1859 aa12.29□□□□□ -0.44
PTPN7-213ENST00000486116 PEX10O60683 326 aa12.28□□□□□ -0.44
PTPN7-213ENST00000486116 GNAI1P63096 354 aa12.28□□□□□ -0.44
PTPN7-213ENST00000486116 TAF7LQ5H9L4 462 aa12.28□□□□□ -0.44
PTPN7-213ENST00000486116 POTEEQ6S8J3 1075 aa12.28□□□□□ -0.44
PTPN7-213ENST00000486116 PROCA1Q8NCQ7 364 aaPredicted RBP12.28□□□□□ -0.44
PTPN7-213ENST00000486116 LINS1Q8NG48 757 aa12.28□□□□□ -0.44
PTPN7-213ENST00000486116 LRFN3Q9BTN0 628 aa12.28□□□□□ -0.44
PTPN7-213ENST00000486116 PUS3Q9BZE2 481 aaKnown RBP12.28□□□□□ -0.44
PTPN7-213ENST00000486116 ATP11BQ9Y2G3 1177 aa12.28□□□□□ -0.44
PTPN7-213ENST00000486116 SUGT1Q9Y2Z0 365 aa12.28□□□□□ -0.44
PTPN7-213ENST00000486116 CHD9Q3L8U1 2897 aa12.28□□□□□ -0.44
PTPN7-213ENST00000486116 FRAT2O75474 233 aaPredicted RBP12.27□□□□□ -0.45
PTPN7-213ENST00000486116 MRPS5P82675 430 aaKnown RBP12.27□□□□□ -0.45
PTPN7-213ENST00000486116 DIXDC1Q155Q3 683 aa12.27□□□□□ -0.45
PTPN7-213ENST00000486116 CCDC57Q2TAC2 916 aa12.27□□□□□ -0.45
PTPN7-213ENST00000486116 SH3BP5LQ7L8J4 393 aa12.27□□□□□ -0.45
PTPN7-213ENST00000486116 VPS37DQ86XT2 251 aa12.27□□□□□ -0.45
PTPN7-213ENST00000486116 TRMT44Q8IYL2 757 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms