RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 DNAJC10Q8IXB1 793 aa9.12□□□□□ -0.95
SMC4-217ENST00000485867 NFATC2IPQ8NCF5 419 aa9.12□□□□□ -0.95
SMC4-217ENST00000485867 GALNT6Q8NCL4 622 aa9.12□□□□□ -0.95
SMC4-217ENST00000485867 CAPNS2Q96L46 248 aa9.12□□□□□ -0.95
SMC4-217ENST00000485867 ZCCHC2Q9C0B9 1178 aaKnown RBP9.12□□□□□ -0.95
SMC4-217ENST00000485867 ZNF541Q9H0D2 1346 aa9.11□□□□□ -0.95
SMC4-217ENST00000485867 CDK2AP1O14519 115 aa9.11□□□□□ -0.95
SMC4-217ENST00000485867 BMP4P12644 408 aa9.11□□□□□ -0.95
SMC4-217ENST00000485867 SKIP12755 728 aa9.11□□□□□ -0.95
SMC4-217ENST00000485867 EPHX2P34913 555 aa9.11□□□□□ -0.95
SMC4-217ENST00000485867 EML3Q32P44 896 aa9.11□□□□□ -0.95
SMC4-217ENST00000485867 MAP1SQ66K74 1059 aaPredicted RBP9.11□□□□□ -0.95
SMC4-217ENST00000485867 NLRP8Q86W28 1048 aa9.11□□□□□ -0.95
SMC4-217ENST00000485867 CNTROBQ8N137 903 aa9.11□□□□□ -0.95
SMC4-217ENST00000485867 GOLGA6L1Q8N7Z2 621 aa9.11□□□□□ -0.95
SMC4-217ENST00000485867 HACL1Q9UJ83 578 aa9.11□□□□□ -0.95
SMC4-217ENST00000485867 PCDHGC4Q9Y5F7 938 aa9.11□□□□□ -0.95
SMC4-217ENST00000485867 UBR2Q8IWV8 1755 aa9.1□□□□□ -0.95
SMC4-217ENST00000485867 LZTS3O60299 673 aaPredicted RBP9.1□□□□□ -0.95
SMC4-217ENST00000485867 ITGB2P05107 769 aa9.1□□□□□ -0.95
SMC4-217ENST00000485867 CYP19A1P11511 503 aaPredicted RBP9.1□□□□□ -0.95
SMC4-217ENST00000485867 ECE1P42892 770 aa9.1□□□□□ -0.95
SMC4-217ENST00000485867 MTHFSP49914 203 aa9.1□□□□□ -0.95
SMC4-217ENST00000485867 PLA2G4EQ3MJ16 856 aa9.1□□□□□ -0.95
SMC4-217ENST00000485867 PLEKHO1Q53GL0 409 aaPredicted RBP9.1□□□□□ -0.95
SMC4-217ENST00000485867 SLCO4C1Q6ZQN7 724 aa9.1□□□□□ -0.95
SMC4-217ENST00000485867 EDARADDQ8WWZ3 215 aa9.1□□□□□ -0.95
SMC4-217ENST00000485867 GPR101Q96P66 508 aaPredicted RBP9.1□□□□□ -0.95
SMC4-217ENST00000485867 BRIP1Q9BX63 1249 aa9.1□□□□□ -0.95
SMC4-217ENST00000485867 POLKQ9UBT6 870 aa9.1□□□□□ -0.95
SMC4-217ENST00000485867 HCN2Q9UL51 889 aa9.1□□□□□ -0.95
SMC4-217ENST00000485867 ZBTB1Q9Y2K1 713 aa9.1□□□□□ -0.95
SMC4-217ENST00000485867 BCORQ6W2J9 1755 aa9.09□□□□□ -0.95
SMC4-217ENST00000485867 RNF123Q5XPI4 1314 aa9.09□□□□□ -0.95
SMC4-217ENST00000485867 PDE6BP35913 854 aa9.09□□□□□ -0.95
SMC4-217ENST00000485867 GTF2IP78347 998 aa9.09□□□□□ -0.95
SMC4-217ENST00000485867 AMOTQ4VCS5 1084 aa9.09□□□□□ -0.95
SMC4-217ENST00000485867 SOGA3Q5TF21 947 aa9.09□□□□□ -0.95
SMC4-217ENST00000485867 CYP4F22Q6NT55 531 aa9.09□□□□□ -0.95
SMC4-217ENST00000485867 PRPF40BQ6NWY9 871 aaKnown RBP9.09□□□□□ -0.95
SMC4-217ENST00000485867 BICDL1Q6ZP65 573 aa9.09□□□□□ -0.95
SMC4-217ENST00000485867 PNMA8AQ86V59 439 aaPredicted RBP9.09□□□□□ -0.95
SMC4-217ENST00000485867 DDX21Q9NR30 783 aaKnown RBP eCLIP9.09□□□□□ -0.95
SMC4-217ENST00000485867 ZDHHC3Q9NYG2 299 aa9.09□□□□□ -0.95
SMC4-217ENST00000485867 NOD1Q9Y239 953 aa9.09□□□□□ -0.95
SMC4-217ENST00000485867 MRC1P22897 1456 aa9.08□□□□□ -0.96
SMC4-217ENST00000485867 A0A1W2PNR3 127 aa9.08□□□□□ -0.96
SMC4-217ENST00000485867 HOXB4P17483 251 aaPredicted RBP9.08□□□□□ -0.96
SMC4-217ENST00000485867 FMR1Q06787 632 aaKnown RBP eCLIP9.08□□□□□ -0.966e-9■□□□□ 8.8
SMC4-217ENST00000485867 GRM1Q13255 1194 aa9.08□□□□□ -0.96
SMC4-217ENST00000485867 DGKZQ13574 1117 aa9.08□□□□□ -0.96
SMC4-217ENST00000485867 NCOA4Q13772 614 aa9.08□□□□□ -0.96
SMC4-217ENST00000485867 TBC1D9BQ66K14 1250 aa9.08□□□□□ -0.96
SMC4-217ENST00000485867 STYK1Q6J9G0 422 aa9.08□□□□□ -0.96
SMC4-217ENST00000485867 PRR5LQ6MZQ0 368 aa9.08□□□□□ -0.96
SMC4-217ENST00000485867 GGA1Q9UJY5 639 aa9.08□□□□□ -0.96
SMC4-217ENST00000485867 ATXN7O15265 892 aaPredicted RBP9.07□□□□□ -0.96
SMC4-217ENST00000485867 CA12O43570 354 aa9.07□□□□□ -0.96
SMC4-217ENST00000485867 AOC2O75106 756 aa9.07□□□□□ -0.96
SMC4-217ENST00000485867 MAP2K2P36507 400 aa9.07□□□□□ -0.96
SMC4-217ENST00000485867 C1orf141Q5JVX7 400 aa9.07□□□□□ -0.96
SMC4-217ENST00000485867 WWC1Q8IX03 1113 aa9.07□□□□□ -0.96
SMC4-217ENST00000485867 C7orf43Q8WVR3 580 aa9.07□□□□□ -0.96
SMC4-217ENST00000485867 USP17L5A8MUK1 530 aa9.06□□□□□ -0.96
SMC4-217ENST00000485867 BACH1O14867 736 aa9.06□□□□□ -0.96
SMC4-217ENST00000485867 SRGNP10124 158 aa9.06□□□□□ -0.96
SMC4-217ENST00000485867 ARAFP10398 606 aa9.06□□□□□ -0.96
SMC4-217ENST00000485867 TNP2Q05952 138 aa9.06□□□□□ -0.96
SMC4-217ENST00000485867 CCDC93Q567U6 631 aa9.06□□□□□ -0.96
SMC4-217ENST00000485867 ARSJQ5FYB0 599 aaPredicted RBP9.06□□□□□ -0.96
SMC4-217ENST00000485867 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.06□□□□□ -0.96
SMC4-217ENST00000485867 ADAMTS19Q8TE59 1207 aa9.06□□□□□ -0.96
SMC4-217ENST00000485867 ZIC5Q96T25 663 aa9.06□□□□□ -0.96
SMC4-217ENST00000485867 ZNF277Q9NRM2 450 aaPredicted RBP9.06□□□□□ -0.96
SMC4-217ENST00000485867 ZNF358Q9NW07 568 aa9.06□□□□□ -0.96
SMC4-217ENST00000485867 SCHIP1Q9P0W5 487 aaPredicted RBP9.06□□□□□ -0.96
SMC4-217ENST00000485867 MKL2Q9ULH7 1088 aa9.06□□□□□ -0.96
SMC4-217ENST00000485867 DCDC2BA2VCK2 349 aa9.05□□□□□ -0.96
SMC4-217ENST00000485867 POM121CA8CG34 1229 aa9.05□□□□□ -0.96
SMC4-217ENST00000485867 FZD9O00144 591 aa9.05□□□□□ -0.96
SMC4-217ENST00000485867 MAPTP10636 758 aaKnown RBP9.05□□□□□ -0.96
SMC4-217ENST00000485867 EPXP11678 715 aa9.05□□□□□ -0.96
SMC4-217ENST00000485867 CANXP27824 592 aaKnown RBP9.05□□□□□ -0.96
SMC4-217ENST00000485867 EPHA4P54764 986 aa9.05□□□□□ -0.96
SMC4-217ENST00000485867 EIF5P55010 431 aaKnown RBP9.05□□□□□ -0.96
SMC4-217ENST00000485867 SOX10P56693 466 aa9.05□□□□□ -0.96
SMC4-217ENST00000485867 FKBP4Q02790 459 aaKnown RBP eCLIP9.05□□□□□ -0.96
SMC4-217ENST00000485867 CST9Q5W186 159 aa9.05□□□□□ -0.96
SMC4-217ENST00000485867 AEBP1Q8IUX7 1158 aa9.05□□□□□ -0.96
SMC4-217ENST00000485867 DEPDC4Q8N2C3 294 aa9.05□□□□□ -0.96
SMC4-217ENST00000485867 MASTLQ96GX5 879 aa9.05□□□□□ -0.96
SMC4-217ENST00000485867 SPOCK3Q9BQ16 436 aa9.05□□□□□ -0.96
SMC4-217ENST00000485867 COL4A5P29400 1685 aa9.04□□□□□ -0.96
SMC4-217ENST00000485867 TRAF5O00463 557 aa9.04□□□□□ -0.96
SMC4-217ENST00000485867 MSTNO14793 375 aa9.04□□□□□ -0.96
SMC4-217ENST00000485867 RAD21O60216 631 aa9.04□□□□□ -0.96
SMC4-217ENST00000485867 FLIIQ13045 1269 aa9.04□□□□□ -0.96
SMC4-217ENST00000485867 SLC39A6Q13433 755 aa9.04□□□□□ -0.96
SMC4-217ENST00000485867 GPC2Q8N158 579 aa9.04□□□□□ -0.96
SMC4-217ENST00000485867 CNBD1Q8NA66 436 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms