RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 C17orf99Q6UX52 265 aa16.93■□□□□ 0.3
SCAF4-206ENST00000485790 SCYL3Q8IZE3 742 aa16.93■□□□□ 0.3
SCAF4-206ENST00000485790 HMG20BQ9P0W2 317 aa16.93■□□□□ 0.3
SCAF4-206ENST00000485790 PHF20L1A8MW92 1017 aa16.92■□□□□ 0.3
SCAF4-206ENST00000485790 NPM3O75607 178 aaKnown RBP16.92■□□□□ 0.3
SCAF4-206ENST00000485790 FTSJ3Q8IY81 847 aaKnown RBP16.92■□□□□ 0.3
SCAF4-206ENST00000485790 PARK7Q99497 189 aaKnown RBP16.92■□□□□ 0.3
SCAF4-206ENST00000485790 MROH7-TTC4A0A0A0MT08 1334 aa16.92■□□□□ 0.3
SCAF4-206ENST00000485790 POTEFA5A3E0 1075 aa16.91■□□□□ 0.3
SCAF4-206ENST00000485790 TBC1D12O60347 775 aa16.91■□□□□ 0.3
SCAF4-206ENST00000485790 BAG3O95817 575 aa16.91■□□□□ 0.3
SCAF4-206ENST00000485790 PTPRAP18433 802 aa16.91■□□□□ 0.3
SCAF4-206ENST00000485790 PSMC4P43686 418 aa16.91■□□□□ 0.3
SCAF4-206ENST00000485790 ATP8B2P98198 1209 aa16.91■□□□□ 0.3
SCAF4-206ENST00000485790 HNRNPUQ00839 825 aaKnown RBP eCLIP16.91■□□□□ 0.3
SCAF4-206ENST00000485790 GCC1Q96CN9 775 aa16.91■□□□□ 0.3
SCAF4-206ENST00000485790 ZNF333Q96JL9 665 aa16.91■□□□□ 0.3
SCAF4-206ENST00000485790 GPR108Q9NPR9 543 aa16.91■□□□□ 0.3
SCAF4-206ENST00000485790 CPA4Q9UI42 421 aa16.91■□□□□ 0.3
SCAF4-206ENST00000485790 PTCH2Q9Y6C5 1203 aa16.91■□□□□ 0.3
SCAF4-206ENST00000485790 A0A1B0GUL6 1792 aa16.9■□□□□ 0.3
SCAF4-206ENST00000485790 PNMA6EA0A0J9YXQ4 647 aa16.9■□□□□ 0.3
SCAF4-206ENST00000485790 IGSF3O75054 1194 aa16.9■□□□□ 0.3
SCAF4-206ENST00000485790 SURF6O75683 361 aaKnown RBP16.9■□□□□ 0.3
SCAF4-206ENST00000485790 TTC39AQ5SRH9 613 aa16.9■□□□□ 0.3
SCAF4-206ENST00000485790 TBC1D9Q6ZT07 1266 aa16.9■□□□□ 0.3
SCAF4-206ENST00000485790 TMEM57Q8N5G2 664 aa16.9■□□□□ 0.3
SCAF4-206ENST00000485790 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.9■□□□□ 0.35e-12■■□□□ 12.3
SCAF4-206ENST00000485790 TNRC18O15417 2968 aaPredicted RBP16.9■□□□□ 0.3
SCAF4-206ENST00000485790 ECM29Q5VYK3 1845 aa16.89■□□□□ 0.29
SCAF4-206ENST00000485790 DDTLA6NHG4 134 aaPredicted RBP16.89■□□□□ 0.29
SCAF4-206ENST00000485790 PLCG2P16885 1265 aa16.89■□□□□ 0.29
SCAF4-206ENST00000485790 EN2P19622 333 aaPredicted RBP16.89■□□□□ 0.29
SCAF4-206ENST00000485790 ARID4AP29374 1257 aaPredicted RBP16.89■□□□□ 0.29
SCAF4-206ENST00000485790 SH3BP5LQ7L8J4 393 aa16.89■□□□□ 0.29
SCAF4-206ENST00000485790 RAET1EQ8TD07 263 aa16.89■□□□□ 0.29
SCAF4-206ENST00000485790 NSUN4Q96CB9 384 aaKnown RBP16.89■□□□□ 0.29
SCAF4-206ENST00000485790 AFG3L2Q9Y4W6 797 aa16.89■□□□□ 0.29
SCAF4-206ENST00000485790 FCGRTP55899 365 aa16.88■□□□□ 0.29
SCAF4-206ENST00000485790 GADL1Q6ZQY3 521 aa16.88■□□□□ 0.29
SCAF4-206ENST00000485790 SSH3Q8TE77 659 aa16.88■□□□□ 0.29
SCAF4-206ENST00000485790 TRIM47Q96LD4 638 aa16.88■□□□□ 0.29
SCAF4-206ENST00000485790 ARHGAP39Q9C0H5 1083 aa16.88■□□□□ 0.29
SCAF4-206ENST00000485790 BIN2Q9UBW5 565 aaPredicted RBP16.88■□□□□ 0.29
SCAF4-206ENST00000485790 SRRDQ9UH36 339 aa16.88■□□□□ 0.29
SCAF4-206ENST00000485790 SLC45A1Q9Y2W3 748 aa16.88■□□□□ 0.29
SCAF4-206ENST00000485790 A0A0G2JLL6 359 aaPredicted RBP16.87■□□□□ 0.29
SCAF4-206ENST00000485790 ECM2O94769 699 aaPredicted RBP16.87■□□□□ 0.29
SCAF4-206ENST00000485790 RHBDL3P58872 404 aa16.87■□□□□ 0.29
SCAF4-206ENST00000485790 CAP1Q01518 475 aa16.87■□□□□ 0.29
SCAF4-206ENST00000485790 MOGSQ13724 837 aa16.87■□□□□ 0.29
SCAF4-206ENST00000485790 POLA2Q14181 598 aa16.87■□□□□ 0.29
SCAF4-206ENST00000485790 NAA16Q6N069 864 aaPredicted RBP16.87■□□□□ 0.29
SCAF4-206ENST00000485790 GPAT2Q6NUI2 795 aa16.87■□□□□ 0.29
SCAF4-206ENST00000485790 PRRT2Q7Z6L0 340 aaPredicted RBP16.87■□□□□ 0.29
SCAF4-206ENST00000485790 TEX11Q8IYF3 940 aa16.87■□□□□ 0.29
SCAF4-206ENST00000485790 TBC1D2Q9BYX2 928 aa16.87■□□□□ 0.29
SCAF4-206ENST00000485790 OSBPL5Q9H0X9 879 aaPredicted RBP16.87■□□□□ 0.29
SCAF4-206ENST00000485790 DHX36Q9H2U1 1008 aaKnown RBP16.87■□□□□ 0.29
SCAF4-206ENST00000485790 DDX4Q9NQI0 724 aaKnown RBP16.87■□□□□ 0.29
SCAF4-206ENST00000485790 PI4KBQ9UBF8 816 aa16.87■□□□□ 0.29
SCAF4-206ENST00000485790 TNNQ9UQP3 1299 aa16.87■□□□□ 0.29
SCAF4-206ENST00000485790 TRIM75PA6NK02 468 aa16.86■□□□□ 0.29
SCAF4-206ENST00000485790 MYCP01106 439 aaPredicted RBP16.86■□□□□ 0.29
SCAF4-206ENST00000485790 CYP2C8P10632 490 aa16.86■□□□□ 0.29
SCAF4-206ENST00000485790 MS4A1P11836 297 aa16.86■□□□□ 0.29
SCAF4-206ENST00000485790 TNNI3KQ59H18 835 aa16.86■□□□□ 0.29
SCAF4-206ENST00000485790 DIEXFQ68CQ4 756 aaKnown RBP16.86■□□□□ 0.29
SCAF4-206ENST00000485790 ITPRIPQ8IWB1 547 aa16.86■□□□□ 0.29
SCAF4-206ENST00000485790 MIER1Q8N108 512 aa16.86■□□□□ 0.29
SCAF4-206ENST00000485790 SMCR8Q8TEV9 937 aaPredicted RBP16.86■□□□□ 0.29
SCAF4-206ENST00000485790 SH3TC2Q8TF17 1288 aa16.86■□□□□ 0.29
SCAF4-206ENST00000485790 FPGT-TNNI3KV9GXZ4 949 aa16.86■□□□□ 0.29
SCAF4-206ENST00000485790 ZBTB7BO15156 539 aaPredicted RBP16.85■□□□□ 0.29
SCAF4-206ENST00000485790 GRK4P32298 578 aa16.85■□□□□ 0.29
SCAF4-206ENST00000485790 MCAMP43121 646 aa16.85■□□□□ 0.29
SCAF4-206ENST00000485790 PABPC4Q13310 644 aaKnown RBP eCLIP16.85■□□□□ 0.29
SCAF4-206ENST00000485790 PI16Q6UXB8 463 aa16.85■□□□□ 0.29
SCAF4-206ENST00000485790 FOXP4Q8IVH2 680 aaPredicted RBP16.85■□□□□ 0.29
SCAF4-206ENST00000485790 NKX2-3Q8TAU0 364 aa16.85■□□□□ 0.29
SCAF4-206ENST00000485790 ZNF512BQ96KM6 892 aaPredicted RBP16.85■□□□□ 0.29
SCAF4-206ENST00000485790 TRIM34Q9BYJ4 488 aa16.85■□□□□ 0.29
SCAF4-206ENST00000485790 SNRKQ9NRH2 765 aa16.85■□□□□ 0.29
SCAF4-206ENST00000485790 HERC5Q9UII4 1024 aaKnown RBP16.85■□□□□ 0.29
SCAF4-206ENST00000485790 PNMA3Q9UL41 463 aa16.85■□□□□ 0.29
SCAF4-206ENST00000485790 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.85■□□□□ 0.29
SCAF4-206ENST00000485790 OSBPP22059 807 aa16.84■□□□□ 0.29
SCAF4-206ENST00000485790 PPP4CP60510 307 aa16.84■□□□□ 0.29
SCAF4-206ENST00000485790 UBXN2AP68543 259 aa16.84■□□□□ 0.29
SCAF4-206ENST00000485790 AS3MTQ9HBK9 375 aa16.84■□□□□ 0.29
SCAF4-206ENST00000485790 NOP58Q9Y2X3 529 aaKnown RBP16.84■□□□□ 0.29
SCAF4-206ENST00000485790 USP17L5A8MUK1 530 aa16.83■□□□□ 0.28
SCAF4-206ENST00000485790 BCRP11274 1271 aa16.83■□□□□ 0.28
SCAF4-206ENST00000485790 CAP2P40123 477 aa16.83■□□□□ 0.28
SCAF4-206ENST00000485790 SPP2Q13103 211 aa16.83■□□□□ 0.28
SCAF4-206ENST00000485790 ATRNL1Q5VV63 1379 aa16.83■□□□□ 0.28
SCAF4-206ENST00000485790 MYPNQ86TC9 1320 aa16.83■□□□□ 0.28
SCAF4-206ENST00000485790 ZNF280CQ8ND82 737 aa16.83■□□□□ 0.28
SCAF4-206ENST00000485790 ZNF384Q8TF68 577 aa16.83■□□□□ 0.28
SCAF4-206ENST00000485790 DBNDD2Q9BQY9 259 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 184.7 ms