RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 TMPRSS2O15393 492 aa9.1□□□□□ -0.95
SF3B1-210ENST00000482158 FGRP09769 529 aa9.1□□□□□ -0.95
SF3B1-210ENST00000482158 DNAJA1P31689 397 aaKnown RBP9.1□□□□□ -0.95
SF3B1-210ENST00000482158 ARID5AQ03989 594 aa9.1□□□□□ -0.95
SF3B1-210ENST00000482158 RING1Q06587 406 aa9.1□□□□□ -0.95
SF3B1-210ENST00000482158 WIPI1Q5MNZ9 446 aaPredicted RBP9.1□□□□□ -0.95
SF3B1-210ENST00000482158 HP1BP3Q5SSJ5 553 aaPredicted RBP9.1□□□□□ -0.95
SF3B1-210ENST00000482158 CYFIP1Q7L576 1253 aa9.1□□□□□ -0.95
SF3B1-210ENST00000482158 MCF2L2Q86YR7 1114 aa9.1□□□□□ -0.95
SF3B1-210ENST00000482158 SMG8Q8ND04 991 aaKnown RBP9.1□□□□□ -0.95
SF3B1-210ENST00000482158 BRMS1Q9HCU9 246 aa9.1□□□□□ -0.95
SF3B1-210ENST00000482158 PRKAG2Q9UGJ0 569 aa9.1□□□□□ -0.95
SF3B1-210ENST00000482158 EFR3BQ9Y2G0 817 aa9.1□□□□□ -0.95
SF3B1-210ENST00000482158 DCDC2CA8MYV0 355 aa9.09□□□□□ -0.95
SF3B1-210ENST00000482158 TIAF1O95411 115 aa9.09□□□□□ -0.95
SF3B1-210ENST00000482158 AKAP4Q5JQC9 854 aa9.09□□□□□ -0.95
SF3B1-210ENST00000482158 Q6ZS46 218 aa9.09□□□□□ -0.95
SF3B1-210ENST00000482158 SEC16BQ96JE7 1060 aa9.09□□□□□ -0.95
SF3B1-210ENST00000482158 SPATA32Q96LK8 384 aa9.09□□□□□ -0.95
SF3B1-210ENST00000482158 RAD18Q9NS91 495 aa9.09□□□□□ -0.95
SF3B1-210ENST00000482158 CRIM1Q9NZV1 1036 aa9.09□□□□□ -0.95
SF3B1-210ENST00000482158 SNCAIPQ9Y6H5 919 aa9.09□□□□□ -0.95
SF3B1-210ENST00000482158 BPNT1O95861 308 aa9.08□□□□□ -0.96
SF3B1-210ENST00000482158 SLFN14P0C7P3 912 aa9.08□□□□□ -0.96
SF3B1-210ENST00000482158 DRD2P14416 443 aa9.08□□□□□ -0.96
SF3B1-210ENST00000482158 NASPP49321 788 aaPredicted RBP9.08□□□□□ -0.96
SF3B1-210ENST00000482158 CWF19L2Q2TBE0 894 aaKnown RBP9.08□□□□□ -0.96
SF3B1-210ENST00000482158 NUTM2GQ5VZR2 741 aa9.08□□□□□ -0.96
SF3B1-210ENST00000482158 C12orf40Q86WS4 652 aa9.08□□□□□ -0.96
SF3B1-210ENST00000482158 CSADQ9Y600 493 aa9.08□□□□□ -0.96
SF3B1-210ENST00000482158 ADH5P11766 374 aa9.07□□□□□ -0.96
SF3B1-210ENST00000482158 NOS3P29474 1203 aa9.07□□□□□ -0.96
SF3B1-210ENST00000482158 NTF4P34130 210 aa9.07□□□□□ -0.96
SF3B1-210ENST00000482158 ID3Q02535 119 aa9.07□□□□□ -0.96
SF3B1-210ENST00000482158 CLCQ05315 142 aa9.07□□□□□ -0.96
SF3B1-210ENST00000482158 SOX4Q06945 474 aaPredicted RBP9.07□□□□□ -0.96
SF3B1-210ENST00000482158 VPS37DQ86XT2 251 aa9.07□□□□□ -0.96
SF3B1-210ENST00000482158 TANGO6Q9C0B7 1094 aa9.07□□□□□ -0.96
SF3B1-210ENST00000482158 GSX1Q9H4S2 264 aaPredicted RBP9.07□□□□□ -0.96
SF3B1-210ENST00000482158 AKTIPQ9H8T0 292 aa9.07□□□□□ -0.96
SF3B1-210ENST00000482158 CYP4F12Q9HCS2 524 aa9.07□□□□□ -0.96
SF3B1-210ENST00000482158 DISC1Q9NRI5 854 aa9.07□□□□□ -0.96
SF3B1-210ENST00000482158 HIF3AQ9Y2N7 669 aa9.07□□□□□ -0.96
SF3B1-210ENST00000482158 PRR36Q9H6K5 1346 aa9.06□□□□□ -0.96
SF3B1-210ENST00000482158 C9orf172C9J069 976 aa9.06□□□□□ -0.96
SF3B1-210ENST00000482158 GRIN3BO60391 1043 aa9.06□□□□□ -0.96
SF3B1-210ENST00000482158 ERVK-24P63145 666 aa9.06□□□□□ -0.96
SF3B1-210ENST00000482158 COL9A2Q14055 689 aaPredicted RBP9.06□□□□□ -0.96
SF3B1-210ENST00000482158 ADGRE1Q14246 886 aa9.06□□□□□ -0.96
SF3B1-210ENST00000482158 HDXQ7Z353 690 aa9.06□□□□□ -0.96
SF3B1-210ENST00000482158 REXO1Q8N1G1 1221 aaKnown RBP9.06□□□□□ -0.96
SF3B1-210ENST00000482158 DRC1Q96MC2 740 aa9.06□□□□□ -0.96
SF3B1-210ENST00000482158 FANCD2OSQ96PS1 177 aa9.06□□□□□ -0.96
SF3B1-210ENST00000482158 USP21Q9UK80 565 aa9.06□□□□□ -0.96
SF3B1-210ENST00000482158 CORINQ9Y5Q5 1042 aa9.06□□□□□ -0.96
SF3B1-210ENST00000482158 KRBA1A5PL33 1030 aa9.05□□□□□ -0.96
SF3B1-210ENST00000482158 MBTPS1Q14703 1052 aa9.05□□□□□ -0.96
SF3B1-210ENST00000482158 SF3A1Q15459 793 aaKnown RBP9.05□□□□□ -0.96
SF3B1-210ENST00000482158 PPM1JQ5JR12 505 aa9.05□□□□□ -0.96
SF3B1-210ENST00000482158 ALYREFQ86V81 257 aaKnown RBP9.05□□□□□ -0.96
SF3B1-210ENST00000482158 C2CD4AQ8NCU7 369 aaPredicted RBP9.05□□□□□ -0.96
SF3B1-210ENST00000482158 WFDC12Q8WWY7 111 aa9.05□□□□□ -0.96
SF3B1-210ENST00000482158 ELMO3Q96BJ8 720 aa9.05□□□□□ -0.96
SF3B1-210ENST00000482158 UBL7Q96S82 380 aaPredicted RBP9.05□□□□□ -0.96
SF3B1-210ENST00000482158 EHMT1Q9H9B1 1298 aa9.05□□□□□ -0.96
SF3B1-210ENST00000482158 PPT2Q9UMR5 302 aa9.05□□□□□ -0.96
SF3B1-210ENST00000482158 PCDHB14Q9Y5E9 798 aa9.05□□□□□ -0.96
SF3B1-210ENST00000482158 TACC3Q9Y6A5 838 aa9.05□□□□□ -0.96
SF3B1-210ENST00000482158 ATE1O95260 518 aa9.04□□□□□ -0.96
SF3B1-210ENST00000482158 PREPP48147 710 aa9.04□□□□□ -0.96
SF3B1-210ENST00000482158 IREB2P48200 963 aaKnown RBP9.04□□□□□ -0.96
SF3B1-210ENST00000482158 HNRNPUQ00839 825 aaKnown RBP eCLIP9.04□□□□□ -0.96
SF3B1-210ENST00000482158 ANKRD34AQ69YU3 496 aa9.04□□□□□ -0.96
SF3B1-210ENST00000482158 GK5Q6ZS86 529 aa9.04□□□□□ -0.96
SF3B1-210ENST00000482158 C12orf50Q8NA57 414 aaPredicted RBP9.04□□□□□ -0.96
SF3B1-210ENST00000482158 NACC1Q96RE7 527 aa9.04□□□□□ -0.96
SF3B1-210ENST00000482158 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.04□□□□□ -0.96
SF3B1-210ENST00000482158 PRAMEF27A3QJZ7 478 aa9.03□□□□□ -0.96
SF3B1-210ENST00000482158 FAM181BA6NEQ2 426 aa9.03□□□□□ -0.96
SF3B1-210ENST00000482158 APBA3O96018 575 aa9.03□□□□□ -0.96
SF3B1-210ENST00000482158 NEFMP07197 916 aa9.03□□□□□ -0.96
SF3B1-210ENST00000482158 MCM4P33991 863 aa9.03□□□□□ -0.96
SF3B1-210ENST00000482158 GSK3AP49840 483 aa9.03□□□□□ -0.96
SF3B1-210ENST00000482158 ZNF165P49910 485 aa9.03□□□□□ -0.96
SF3B1-210ENST00000482158 NRG1Q02297 640 aaPredicted RBP9.03□□□□□ -0.96
SF3B1-210ENST00000482158 ZBTB37Q5TC79 503 aa9.03□□□□□ -0.96
SF3B1-210ENST00000482158 FDX2Q6P4F2 183 aa9.03□□□□□ -0.96
SF3B1-210ENST00000482158 CCDC81Q6ZN84 652 aa9.03□□□□□ -0.96
SF3B1-210ENST00000482158 USP35Q9P2H5 1018 aa9.03□□□□□ -0.96
SF3B1-210ENST00000482158 STK17AQ9UEE5 414 aa9.03□□□□□ -0.96
SF3B1-210ENST00000482158 AP4E1Q9UPM8 1137 aa9.03□□□□□ -0.96
SF3B1-210ENST00000482158 ACTL7BQ9Y614 415 aa9.03□□□□□ -0.96
SF3B1-210ENST00000482158 HTR3BO95264 441 aa9.02□□□□□ -0.97
SF3B1-210ENST00000482158 CHRNA4P43681 627 aa9.02□□□□□ -0.97
SF3B1-210ENST00000482158 DIEXFQ68CQ4 756 aaKnown RBP9.02□□□□□ -0.97
SF3B1-210ENST00000482158 RNF214Q8ND24 703 aa9.02□□□□□ -0.97
SF3B1-210ENST00000482158 DHX38Q92620 1227 aaKnown RBP9.02□□□□□ -0.97
SF3B1-210ENST00000482158 FAM46AQ96IP4 442 aaKnown RBP9.02□□□□□ -0.97
SF3B1-210ENST00000482158 SHDQ96IW2 340 aa9.02□□□□□ -0.97
SF3B1-210ENST00000482158 DCAF5Q96JK2 942 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms